RNA–Protein interactions for RNA: ENST00000556172.1

CGRRF1-203, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 2

Gene CGRRF1, Length 605 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-203ENST00000556172 CUX1P39880 1505 aa13.06□□□□□ -0.32
CGRRF1-203ENST00000556172 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
CGRRF1-203ENST00000556172 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
CGRRF1-203ENST00000556172 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
CGRRF1-203ENST00000556172 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
CGRRF1-203ENST00000556172 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
CGRRF1-203ENST00000556172 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
CGRRF1-203ENST00000556172 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
CGRRF1-203ENST00000556172 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
CGRRF1-203ENST00000556172 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
CGRRF1-203ENST00000556172 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
CGRRF1-203ENST00000556172 SOGA1O94964 1423 aa12.96□□□□□ -0.33
CGRRF1-203ENST00000556172 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
CGRRF1-203ENST00000556172 RAD54L2Q9Y4B4 1467 aa12.93□□□□□ -0.34
CGRRF1-203ENST00000556172 ZNF608Q9ULD9 1512 aaPredicted RBP12.91□□□□□ -0.34
CGRRF1-203ENST00000556172 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
CGRRF1-203ENST00000556172 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
CGRRF1-203ENST00000556172 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
CGRRF1-203ENST00000556172 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.35
CGRRF1-203ENST00000556172 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
CGRRF1-203ENST00000556172 PROM2Q8N271 834 aa12.84□□□□□ -0.35
CGRRF1-203ENST00000556172 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
CGRRF1-203ENST00000556172 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
CGRRF1-203ENST00000556172 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
CGRRF1-203ENST00000556172 ABCA5Q8WWZ7 1642 aa12.81□□□□□ -0.36
CGRRF1-203ENST00000556172 GRIN2BQ13224 1484 aa12.8□□□□□ -0.36
CGRRF1-203ENST00000556172 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
CGRRF1-203ENST00000556172 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
CGRRF1-203ENST00000556172 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
CGRRF1-203ENST00000556172 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
CGRRF1-203ENST00000556172 POTEHQ6S545 545 aa12.76□□□□□ -0.37
CGRRF1-203ENST00000556172 KIF27Q86VH2 1401 aa12.76□□□□□ -0.37
CGRRF1-203ENST00000556172 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
CGRRF1-203ENST00000556172 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
CGRRF1-203ENST00000556172 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
CGRRF1-203ENST00000556172 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
CGRRF1-203ENST00000556172 CHD1O14646 1710 aa12.71□□□□□ -0.38
CGRRF1-203ENST00000556172 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
CGRRF1-203ENST00000556172 SYNJ2O15056 1496 aa12.7□□□□□ -0.38
CGRRF1-203ENST00000556172 IGF1RP08069 1367 aa12.69□□□□□ -0.38
CGRRF1-203ENST00000556172 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
CGRRF1-203ENST00000556172 ADAMTS12P58397 1594 aa12.68□□□□□ -0.38
CGRRF1-203ENST00000556172 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
CGRRF1-203ENST00000556172 CUL7Q14999 1698 aa12.66□□□□□ -0.38
CGRRF1-203ENST00000556172 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
CGRRF1-203ENST00000556172 GRIN2AQ12879 1464 aa12.63□□□□□ -0.39
CGRRF1-203ENST00000556172 EEA1Q15075 1411 aa12.62□□□□□ -0.39
CGRRF1-203ENST00000556172 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
CGRRF1-203ENST00000556172 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
CGRRF1-203ENST00000556172 NUP160Q12769 1436 aa12.57□□□□□ -0.4
CGRRF1-203ENST00000556172 CLASP1Q7Z460 1538 aa12.56□□□□□ -0.4
CGRRF1-203ENST00000556172 RAPGEF2Q9Y4G8 1499 aa12.55□□□□□ -0.4
CGRRF1-203ENST00000556172 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
CGRRF1-203ENST00000556172 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
CGRRF1-203ENST00000556172 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
CGRRF1-203ENST00000556172 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
CGRRF1-203ENST00000556172 FAM9AQ8IZU1 332 aaPredicted RBP12.52□□□□□ -0.41
CGRRF1-203ENST00000556172 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
CGRRF1-203ENST00000556172 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
CGRRF1-203ENST00000556172 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
CGRRF1-203ENST00000556172 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
CGRRF1-203ENST00000556172 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
CGRRF1-203ENST00000556172 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
CGRRF1-203ENST00000556172 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
CGRRF1-203ENST00000556172 KIF21BO75037 1637 aa12.46□□□□□ -0.41
CGRRF1-203ENST00000556172 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
CGRRF1-203ENST00000556172 RIMBP3CA6NJZ7 1639 aa12.45□□□□□ -0.42
CGRRF1-203ENST00000556172 RIMBP3BA6NNM3 1639 aa12.45□□□□□ -0.42
CGRRF1-203ENST00000556172 RIMBP3Q9UFD9 1639 aa12.45□□□□□ -0.42
CGRRF1-203ENST00000556172 CTTNBP2Q8WZ74 1663 aa12.44□□□□□ -0.42
CGRRF1-203ENST00000556172 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
CGRRF1-203ENST00000556172 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
CGRRF1-203ENST00000556172 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
CGRRF1-203ENST00000556172 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
CGRRF1-203ENST00000556172 GOLGA3Q08378 1498 aa12.39□□□□□ -0.43
CGRRF1-203ENST00000556172 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
CGRRF1-203ENST00000556172 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
CGRRF1-203ENST00000556172 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
CGRRF1-203ENST00000556172 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
CGRRF1-203ENST00000556172 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
CGRRF1-203ENST00000556172 CYB5RLQ6IPT4 315 aa12.35□□□□□ -0.43
CGRRF1-203ENST00000556172 MIER1Q8N108 512 aa12.35□□□□□ -0.43
CGRRF1-203ENST00000556172 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
CGRRF1-203ENST00000556172 PITPNM1O00562 1244 aa12.33□□□□□ -0.44
CGRRF1-203ENST00000556172 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
CGRRF1-203ENST00000556172 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
CGRRF1-203ENST00000556172 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
CGRRF1-203ENST00000556172 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
CGRRF1-203ENST00000556172 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
CGRRF1-203ENST00000556172 PTPRGP23470 1445 aa12.28□□□□□ -0.44
CGRRF1-203ENST00000556172 SAMD9Q5K651 1589 aa12.27□□□□□ -0.44
CGRRF1-203ENST00000556172 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CGRRF1-203ENST00000556172 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
CGRRF1-203ENST00000556172 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
CGRRF1-203ENST00000556172 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
CGRRF1-203ENST00000556172 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
CGRRF1-203ENST00000556172 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
CGRRF1-203ENST00000556172 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CGRRF1-203ENST00000556172 LOC105371045A0A1W2PR82 267 aa12.21□□□□□ -0.45
CGRRF1-203ENST00000556172 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms