RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 FBLN2P98095 1184 aa12.02□□□□□ -0.49
PSEN1-216ENST00000556066 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.49
PSEN1-216ENST00000556066 CUX1P39880 1505 aa12.01□□□□□ -0.49
PSEN1-216ENST00000556066 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
PSEN1-216ENST00000556066 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
PSEN1-216ENST00000556066 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
PSEN1-216ENST00000556066 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-216ENST00000556066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
PSEN1-216ENST00000556066 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
PSEN1-216ENST00000556066 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
PSEN1-216ENST00000556066 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
PSEN1-216ENST00000556066 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
PSEN1-216ENST00000556066 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
PSEN1-216ENST00000556066 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
PSEN1-216ENST00000556066 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
PSEN1-216ENST00000556066 MAGI1Q96QZ7 1491 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-216ENST00000556066 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
PSEN1-216ENST00000556066 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
PSEN1-216ENST00000556066 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
PSEN1-216ENST00000556066 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
PSEN1-216ENST00000556066 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
PSEN1-216ENST00000556066 ABCB7O75027 752 aa11.85□□□□□ -0.51
PSEN1-216ENST00000556066 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
PSEN1-216ENST00000556066 CLASP1Q7Z460 1538 aa11.84□□□□□ -0.51
PSEN1-216ENST00000556066 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
PSEN1-216ENST00000556066 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
PSEN1-216ENST00000556066 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
PSEN1-216ENST00000556066 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
PSEN1-216ENST00000556066 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
PSEN1-216ENST00000556066 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
PSEN1-216ENST00000556066 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
PSEN1-216ENST00000556066 CSRNP3Q8WYN3 585 aa11.75□□□□□ -0.53
PSEN1-216ENST00000556066 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
PSEN1-216ENST00000556066 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.53
PSEN1-216ENST00000556066 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.53
PSEN1-216ENST00000556066 NUP160Q12769 1436 aa11.69□□□□□ -0.54
PSEN1-216ENST00000556066 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
PSEN1-216ENST00000556066 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
PSEN1-216ENST00000556066 ZBTB22O15209 634 aa11.63□□□□□ -0.55
PSEN1-216ENST00000556066 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
PSEN1-216ENST00000556066 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-216ENST00000556066 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
PSEN1-216ENST00000556066 RUSC2Q8N2Y8 1516 aa11.6□□□□□ -0.55
PSEN1-216ENST00000556066 CUL7Q14999 1698 aa11.59□□□□□ -0.55
PSEN1-216ENST00000556066 IGF1RP08069 1367 aa11.57□□□□□ -0.56
PSEN1-216ENST00000556066 FOXD4L1Q9NU39 408 aa11.57□□□□□ -0.56
PSEN1-216ENST00000556066 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
PSEN1-216ENST00000556066 KIAA0586Q9BVV6 1533 aa11.52□□□□□ -0.57
PSEN1-216ENST00000556066 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
PSEN1-216ENST00000556066 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-216ENST00000556066 POLA2Q14181 598 aa11.51□□□□□ -0.57
PSEN1-216ENST00000556066 KIF13AQ9H1H9 1805 aa11.5□□□□□ -0.57
PSEN1-216ENST00000556066 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
PSEN1-216ENST00000556066 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-216ENST00000556066 KDM4FA0A1W2PPD8 638 aa11.48□□□□□ -0.57
PSEN1-216ENST00000556066 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
PSEN1-216ENST00000556066 ADCY10Q96PN6 1610 aa11.47□□□□□ -0.57
PSEN1-216ENST00000556066 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
PSEN1-216ENST00000556066 ABCC10Q5T3U5 1492 aa11.45□□□□□ -0.58
PSEN1-216ENST00000556066 PTPRGP23470 1445 aa11.43□□□□□ -0.58
PSEN1-216ENST00000556066 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
PSEN1-216ENST00000556066 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
PSEN1-216ENST00000556066 MAPKBP1O60336 1514 aa11.41□□□□□ -0.58
PSEN1-216ENST00000556066 TSPOAP1O95153 1857 aa11.4□□□□□ -0.58
PSEN1-216ENST00000556066 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-216ENST00000556066 TNIKQ9UKE5 1360 aa11.4□□□□□ -0.59
PSEN1-216ENST00000556066 DIP2BQ9P265 1576 aa11.39□□□□□ -0.59
PSEN1-216ENST00000556066 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
PSEN1-216ENST00000556066 CTTNBP2Q8WZ74 1663 aa11.38□□□□□ -0.59
PSEN1-216ENST00000556066 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
PSEN1-216ENST00000556066 AKT1S1Q96B36 256 aa11.36□□□□□ -0.59
PSEN1-216ENST00000556066 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
PSEN1-216ENST00000556066 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
PSEN1-216ENST00000556066 KIAA0556O60303 1618 aa11.34□□□□□ -0.59
PSEN1-216ENST00000556066 UACAQ9BZF9 1416 aa11.33□□□□□ -0.6
PSEN1-216ENST00000556066 KDM6BO15054 1643 aa11.32□□□□□ -0.6
PSEN1-216ENST00000556066 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
PSEN1-216ENST00000556066 UHRF1BP1LA0JNW5 1464 aa11.31□□□□□ -0.6
PSEN1-216ENST00000556066 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-216ENST00000556066 ZCCHC11Q5TAX3 1644 aaKnown RBP11.3□□□□□ -0.6
PSEN1-216ENST00000556066 PLB1Q6P1J6 1458 aa11.3□□□□□ -0.6
PSEN1-216ENST00000556066 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
PSEN1-216ENST00000556066 GOLGA3Q08378 1498 aa11.28□□□□□ -0.6
PSEN1-216ENST00000556066 KDM5BQ9UGL1 1544 aa11.27□□□□□ -0.61
PSEN1-216ENST00000556066 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-216ENST00000556066 GLI2P10070 1586 aa11.25□□□□□ -0.61
PSEN1-216ENST00000556066 PPRC1Q5VV67 1664 aaKnown RBP11.25□□□□□ -0.61
PSEN1-216ENST00000556066 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
PSEN1-216ENST00000556066 ADGRL1O94910 1474 aa11.24□□□□□ -0.61
PSEN1-216ENST00000556066 EPRSP07814 1512 aaKnown RBP11.24□□□□□ -0.61
PSEN1-216ENST00000556066 FAM9AQ8IZU1 332 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-216ENST00000556066 ABCA8O94911 1581 aa11.22□□□□□ -0.61
PSEN1-216ENST00000556066 MAP3K4Q9Y6R4 1608 aa11.22□□□□□ -0.61
PSEN1-216ENST00000556066 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.61
PSEN1-216ENST00000556066 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-216ENST00000556066 ARID3CA6NKF2 412 aa11.2□□□□□ -0.62
PSEN1-216ENST00000556066 KCNH8Q96L42 1107 aa11.2□□□□□ -0.62
PSEN1-216ENST00000556066 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-216ENST00000556066 EEA1Q15075 1411 aa11.18□□□□□ -0.62
PSEN1-216ENST00000556066 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms