RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
PSEN1-214ENST00000555867 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
PSEN1-214ENST00000555867 MKRN4PQ13434 485 aaPredicted RBP11.67□□□□□ -0.54
PSEN1-214ENST00000555867 ARHGEF11O15085 1522 aa11.65□□□□□ -0.54
PSEN1-214ENST00000555867 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
PSEN1-214ENST00000555867 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
PSEN1-214ENST00000555867 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
PSEN1-214ENST00000555867 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-214ENST00000555867 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
PSEN1-214ENST00000555867 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
PSEN1-214ENST00000555867 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
PSEN1-214ENST00000555867 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
PSEN1-214ENST00000555867 PRKAR2AP13861 404 aaKnown RBP11.57□□□□□ -0.56
PSEN1-214ENST00000555867 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
PSEN1-214ENST00000555867 ARAP1Q96P48 1450 aa11.52□□□□□ -0.56
PSEN1-214ENST00000555867 ZNF608Q9ULD9 1512 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-214ENST00000555867 EVX2Q03828 476 aa11.52□□□□□ -0.57
PSEN1-214ENST00000555867 CFTRP13569 1480 aa11.48□□□□□ -0.57
PSEN1-214ENST00000555867 WIZO95785 1651 aa11.46□□□□□ -0.58
PSEN1-214ENST00000555867 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
PSEN1-214ENST00000555867 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
PSEN1-214ENST00000555867 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
PSEN1-214ENST00000555867 CHD1O14646 1710 aa11.38□□□□□ -0.59
PSEN1-214ENST00000555867 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
PSEN1-214ENST00000555867 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-214ENST00000555867 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
PSEN1-214ENST00000555867 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
PSEN1-214ENST00000555867 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.59
PSEN1-214ENST00000555867 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-214ENST00000555867 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
PSEN1-214ENST00000555867 GABBR2O75899 941 aa11.3□□□□□ -0.6
PSEN1-214ENST00000555867 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
PSEN1-214ENST00000555867 TARBP1Q13395 1621 aaKnown RBP11.24□□□□□ -0.61
PSEN1-214ENST00000555867 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
PSEN1-214ENST00000555867 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
PSEN1-214ENST00000555867 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-214ENST00000555867 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
PSEN1-214ENST00000555867 CD44P16070 742 aaKnown RBP11.2□□□□□ -0.62
PSEN1-214ENST00000555867 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
PSEN1-214ENST00000555867 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
PSEN1-214ENST00000555867 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
PSEN1-214ENST00000555867 RAD54L2Q9Y4B4 1467 aa11.18□□□□□ -0.62
PSEN1-214ENST00000555867 CHMP7Q8WUX9 453 aaPredicted RBP11.17□□□□□ -0.62
PSEN1-214ENST00000555867 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
PSEN1-214ENST00000555867 SNAPC4Q5SXM2 1469 aa11.17□□□□□ -0.62
PSEN1-214ENST00000555867 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
PSEN1-214ENST00000555867 CLCN6P51797 869 aa11.15□□□□□ -0.62
PSEN1-214ENST00000555867 KDM4FA0A1W2PPD8 638 aa11.14□□□□□ -0.63
PSEN1-214ENST00000555867 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
PSEN1-214ENST00000555867 SYNJ1O43426 1573 aa11.14□□□□□ -0.63
PSEN1-214ENST00000555867 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
PSEN1-214ENST00000555867 LHX8Q68G74 356 aa11.12□□□□□ -0.63
PSEN1-214ENST00000555867 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
PSEN1-214ENST00000555867 SOGA1O94964 1423 aa11.11□□□□□ -0.63
PSEN1-214ENST00000555867 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
PSEN1-214ENST00000555867 KIF13AQ9H1H9 1805 aa11.07□□□□□ -0.64
PSEN1-214ENST00000555867 SYNJ2O15056 1496 aa11.07□□□□□ -0.64
PSEN1-214ENST00000555867 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-214ENST00000555867 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
PSEN1-214ENST00000555867 CREBZFQ9NS37 354 aa11.06□□□□□ -0.64
PSEN1-214ENST00000555867 GRIN2BQ13224 1484 aa11.05□□□□□ -0.64
PSEN1-214ENST00000555867 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
PSEN1-214ENST00000555867 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
PSEN1-214ENST00000555867 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
PSEN1-214ENST00000555867 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
PSEN1-214ENST00000555867 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
PSEN1-214ENST00000555867 FAM69CQ0P6D2 419 aa10.99□□□□□ -0.65
PSEN1-214ENST00000555867 DCBLD2Q96PD2 775 aa10.99□□□□□ -0.65
PSEN1-214ENST00000555867 CEP170Q5SW79 1584 aa10.97□□□□□ -0.65
PSEN1-214ENST00000555867 CUX1P39880 1505 aa10.94□□□□□ -0.66
PSEN1-214ENST00000555867 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-214ENST00000555867 PBRM1Q86U86 1689 aa10.94□□□□□ -0.66
PSEN1-214ENST00000555867 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
PSEN1-214ENST00000555867 NUP160Q12769 1436 aa10.92□□□□□ -0.66
PSEN1-214ENST00000555867 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
PSEN1-214ENST00000555867 GRIN2AQ12879 1464 aa10.91□□□□□ -0.66
PSEN1-214ENST00000555867 KDM6BO15054 1643 aa10.89□□□□□ -0.67
PSEN1-214ENST00000555867 SHROOM2Q13796 1616 aa10.89□□□□□ -0.67
PSEN1-214ENST00000555867 GALR2O43603 387 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-214ENST00000555867 TSPOAP1O95153 1857 aa10.87□□□□□ -0.67
PSEN1-214ENST00000555867 DIP2BQ9P265 1576 aa10.87□□□□□ -0.67
PSEN1-214ENST00000555867 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
PSEN1-214ENST00000555867 HECW2Q9P2P5 1572 aa10.86□□□□□ -0.67
PSEN1-214ENST00000555867 PRG4Q92954 1404 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-214ENST00000555867 ABCA10Q8WWZ4 1543 aa10.85□□□□□ -0.67
PSEN1-214ENST00000555867 ADGRL1O94910 1474 aa10.85□□□□□ -0.67
PSEN1-214ENST00000555867 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-214ENST00000555867 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
PSEN1-214ENST00000555867 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
PSEN1-214ENST00000555867 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
PSEN1-214ENST00000555867 PHF12Q96QT6 1004 aa10.82□□□□□ -0.68
PSEN1-214ENST00000555867 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
PSEN1-214ENST00000555867 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
PSEN1-214ENST00000555867 FHAD1B1AJZ9 1412 aa10.78□□□□□ -0.68
PSEN1-214ENST00000555867 PROM2Q8N271 834 aa10.77□□□□□ -0.69
PSEN1-214ENST00000555867 COL17A1Q9UMD9 1497 aaPredicted RBP10.76□□□□□ -0.69
PSEN1-214ENST00000555867 PPRC1Q5VV67 1664 aaKnown RBP10.73□□□□□ -0.69
PSEN1-214ENST00000555867 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
PSEN1-214ENST00000555867 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
PSEN1-214ENST00000555867 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms