RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
PCNX1-210ENST00000555780 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
PCNX1-210ENST00000555780 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
PCNX1-210ENST00000555780 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
PCNX1-210ENST00000555780 FBLN2P98095 1184 aa11.69□□□□□ -0.54
PCNX1-210ENST00000555780 CHD1O14646 1710 aa11.69□□□□□ -0.54
PCNX1-210ENST00000555780 PBRM1Q86U86 1689 aa11.68□□□□□ -0.54
PCNX1-210ENST00000555780 IGF1RP08069 1367 aa11.67□□□□□ -0.54
PCNX1-210ENST00000555780 RUSC2Q8N2Y8 1516 aa11.67□□□□□ -0.54
PCNX1-210ENST00000555780 SYNJ2O15056 1496 aa11.67□□□□□ -0.54
PCNX1-210ENST00000555780 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
PCNX1-210ENST00000555780 ADAMTS12P58397 1594 aa11.65□□□□□ -0.54
PCNX1-210ENST00000555780 ERICH3Q5RHP9 1530 aa11.64□□□□□ -0.55
PCNX1-210ENST00000555780 CLASP1Q7Z460 1538 aa11.63□□□□□ -0.55
PCNX1-210ENST00000555780 FHAD1B1AJZ9 1412 aa11.62□□□□□ -0.55
PCNX1-210ENST00000555780 GRIN2AQ12879 1464 aa11.62□□□□□ -0.55
PCNX1-210ENST00000555780 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
PCNX1-210ENST00000555780 ABCB7O75027 752 aa11.6□□□□□ -0.55
PCNX1-210ENST00000555780 TRHP20396 242 aaPredicted RBP11.6□□□□□ -0.55
PCNX1-210ENST00000555780 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
PCNX1-210ENST00000555780 NUP160Q12769 1436 aa11.6□□□□□ -0.55
PCNX1-210ENST00000555780 CEP170Q5SW79 1584 aa11.59□□□□□ -0.55
PCNX1-210ENST00000555780 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
PCNX1-210ENST00000555780 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.56
PCNX1-210ENST00000555780 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.56
PCNX1-210ENST00000555780 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.56
PCNX1-210ENST00000555780 CARMIL1Q5VZK9 1371 aa11.54□□□□□ -0.56
PCNX1-210ENST00000555780 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
PCNX1-210ENST00000555780 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
PCNX1-210ENST00000555780 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
PCNX1-210ENST00000555780 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
PCNX1-210ENST00000555780 CUL7Q14999 1698 aa11.48□□□□□ -0.57
PCNX1-210ENST00000555780 PRXQ9BXM0 1461 aa11.47□□□□□ -0.57
PCNX1-210ENST00000555780 JPH4Q96JJ6 628 aa11.47□□□□□ -0.57
PCNX1-210ENST00000555780 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
PCNX1-210ENST00000555780 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
PCNX1-210ENST00000555780 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
PCNX1-210ENST00000555780 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
PCNX1-210ENST00000555780 APLP2Q06481 763 aa11.43□□□□□ -0.58
PCNX1-210ENST00000555780 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
PCNX1-210ENST00000555780 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
PCNX1-210ENST00000555780 CHRDL2Q6WN34 429 aa11.4□□□□□ -0.58
PCNX1-210ENST00000555780 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
PCNX1-210ENST00000555780 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
PCNX1-210ENST00000555780 EEA1Q15075 1411 aa11.35□□□□□ -0.59
PCNX1-210ENST00000555780 IQGAP2Q13576 1575 aa11.34□□□□□ -0.59
PCNX1-210ENST00000555780 UGGT2Q9NYU1 1516 aa11.34□□□□□ -0.59
PCNX1-210ENST00000555780 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
PCNX1-210ENST00000555780 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
PCNX1-210ENST00000555780 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
PCNX1-210ENST00000555780 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
PCNX1-210ENST00000555780 PTPRGP23470 1445 aa11.28□□□□□ -0.6
PCNX1-210ENST00000555780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-210ENST00000555780 HNRNPUL2Q1KMD3 747 aaKnown RBP11.28□□□□□ -0.6
PCNX1-210ENST00000555780 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
PCNX1-210ENST00000555780 KIF21BO75037 1637 aa11.27□□□□□ -0.6
PCNX1-210ENST00000555780 KIAA0556O60303 1618 aa11.27□□□□□ -0.61
PCNX1-210ENST00000555780 ADCY10Q96PN6 1610 aa11.26□□□□□ -0.61
PCNX1-210ENST00000555780 CTTNBP2Q8WZ74 1663 aa11.26□□□□□ -0.61
PCNX1-210ENST00000555780 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
PCNX1-210ENST00000555780 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
PCNX1-210ENST00000555780 SAMD9Q5K651 1589 aa11.21□□□□□ -0.61
PCNX1-210ENST00000555780 PLB1Q6P1J6 1458 aa11.21□□□□□ -0.61
PCNX1-210ENST00000555780 UACAQ9BZF9 1416 aa11.21□□□□□ -0.61
PCNX1-210ENST00000555780 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
PCNX1-210ENST00000555780 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
PCNX1-210ENST00000555780 UHRF1BP1LA0JNW5 1464 aa11.19□□□□□ -0.62
PCNX1-210ENST00000555780 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
PCNX1-210ENST00000555780 ABCA8O94911 1581 aa11.18□□□□□ -0.62
PCNX1-210ENST00000555780 ABCC2Q92887 1545 aa11.18□□□□□ -0.62
PCNX1-210ENST00000555780 FHOD3Q2V2M9 1422 aa11.18□□□□□ -0.62
PCNX1-210ENST00000555780 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
PCNX1-210ENST00000555780 KDM5BQ9UGL1 1544 aa11.16□□□□□ -0.62
PCNX1-210ENST00000555780 MAPKBP1O60336 1514 aa11.15□□□□□ -0.62
PCNX1-210ENST00000555780 ARHGAP35Q9NRY4 1499 aa11.15□□□□□ -0.62
PCNX1-210ENST00000555780 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
PCNX1-210ENST00000555780 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
PCNX1-210ENST00000555780 ASXL2Q76L83 1435 aa11.12□□□□□ -0.63
PCNX1-210ENST00000555780 ARID3CA6NKF2 412 aa11.12□□□□□ -0.63
PCNX1-210ENST00000555780 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
PCNX1-210ENST00000555780 ATP10BO94823 1461 aa11.12□□□□□ -0.63
PCNX1-210ENST00000555780 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
PCNX1-210ENST00000555780 DIP2BQ9P265 1576 aa11.11□□□□□ -0.63
PCNX1-210ENST00000555780 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
PCNX1-210ENST00000555780 KIF13AQ9H1H9 1805 aa11.1□□□□□ -0.63
PCNX1-210ENST00000555780 POLA2Q14181 598 aa11.1□□□□□ -0.63
PCNX1-210ENST00000555780 NUP153P49790 1475 aaKnown RBP11.1□□□□□ -0.63
PCNX1-210ENST00000555780 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
PCNX1-210ENST00000555780 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
PCNX1-210ENST00000555780 RAPGEF6Q8TEU7 1601 aa11.06□□□□□ -0.64
PCNX1-210ENST00000555780 GLI2P10070 1586 aa11.04□□□□□ -0.64
PCNX1-210ENST00000555780 WDR7Q9Y4E6 1490 aa11.04□□□□□ -0.64
PCNX1-210ENST00000555780 CLIP1P30622 1438 aa11.02□□□□□ -0.64
PCNX1-210ENST00000555780 HAX1O00165 279 aa11.02□□□□□ -0.65
PCNX1-210ENST00000555780 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
PCNX1-210ENST00000555780 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
PCNX1-210ENST00000555780 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
PCNX1-210ENST00000555780 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
PCNX1-210ENST00000555780 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
PCNX1-210ENST00000555780 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms