RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
FOXN3-208ENST00000555034 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
FOXN3-208ENST00000555034 CHMP7Q8WUX9 453 aaPredicted RBP13.8□□□□□ -0.2
FOXN3-208ENST00000555034 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
FOXN3-208ENST00000555034 CUX1P39880 1505 aa13.77□□□□□ -0.21
FOXN3-208ENST00000555034 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
FOXN3-208ENST00000555034 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
FOXN3-208ENST00000555034 SNAPC4Q5SXM2 1469 aa13.75□□□□□ -0.21
FOXN3-208ENST00000555034 CHD1O14646 1710 aa13.75□□□□□ -0.21
FOXN3-208ENST00000555034 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
FOXN3-208ENST00000555034 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
FOXN3-208ENST00000555034 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
FOXN3-208ENST00000555034 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
FOXN3-208ENST00000555034 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
FOXN3-208ENST00000555034 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.22
FOXN3-208ENST00000555034 ARAP1Q96P48 1450 aa13.69□□□□□ -0.22
FOXN3-208ENST00000555034 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
FOXN3-208ENST00000555034 APLP2Q06481 763 aa13.68□□□□□ -0.22
FOXN3-208ENST00000555034 KCNA4P22459 653 aa13.64□□□□□ -0.23
FOXN3-208ENST00000555034 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
FOXN3-208ENST00000555034 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
FOXN3-208ENST00000555034 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
FOXN3-208ENST00000555034 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
FOXN3-208ENST00000555034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
FOXN3-208ENST00000555034 HNRNPUL2Q1KMD3 747 aaKnown RBP13.58□□□□□ -0.24
FOXN3-208ENST00000555034 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
FOXN3-208ENST00000555034 GRIN2AQ12879 1464 aa13.57□□□□□ -0.24
FOXN3-208ENST00000555034 ERICH3Q5RHP9 1530 aa13.56□□□□□ -0.24
FOXN3-208ENST00000555034 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
FOXN3-208ENST00000555034 NUP160Q12769 1436 aa13.55□□□□□ -0.24
FOXN3-208ENST00000555034 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
FOXN3-208ENST00000555034 ADAMTS12P58397 1594 aa13.52□□□□□ -0.25
FOXN3-208ENST00000555034 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
FOXN3-208ENST00000555034 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
FOXN3-208ENST00000555034 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
FOXN3-208ENST00000555034 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
FOXN3-208ENST00000555034 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
FOXN3-208ENST00000555034 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
FOXN3-208ENST00000555034 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
FOXN3-208ENST00000555034 IGF1RP08069 1367 aa13.37□□□□□ -0.27
FOXN3-208ENST00000555034 POLA2Q14181 598 aa13.37□□□□□ -0.27
FOXN3-208ENST00000555034 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
FOXN3-208ENST00000555034 KIAA0586Q9BVV6 1533 aa13.36□□□□□ -0.27
FOXN3-208ENST00000555034 CUL7Q14999 1698 aa13.34□□□□□ -0.27
FOXN3-208ENST00000555034 RUSC2Q8N2Y8 1516 aa13.33□□□□□ -0.28
FOXN3-208ENST00000555034 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
FOXN3-208ENST00000555034 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
FOXN3-208ENST00000555034 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
FOXN3-208ENST00000555034 MAPKBP1O60336 1514 aa13.28□□□□□ -0.28
FOXN3-208ENST00000555034 ABCC10Q5T3U5 1492 aa13.25□□□□□ -0.29
FOXN3-208ENST00000555034 FAM69CQ0P6D2 419 aa13.24□□□□□ -0.29
FOXN3-208ENST00000555034 PTPRGP23470 1445 aa13.23□□□□□ -0.29
FOXN3-208ENST00000555034 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
FOXN3-208ENST00000555034 TNIKQ9UKE5 1360 aa13.22□□□□□ -0.29
FOXN3-208ENST00000555034 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
FOXN3-208ENST00000555034 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
FOXN3-208ENST00000555034 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
FOXN3-208ENST00000555034 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
FOXN3-208ENST00000555034 UHRF1BP1LA0JNW5 1464 aa13.16□□□□□ -0.3
FOXN3-208ENST00000555034 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
FOXN3-208ENST00000555034 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
FOXN3-208ENST00000555034 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
FOXN3-208ENST00000555034 PLB1Q6P1J6 1458 aa13.15□□□□□ -0.3
FOXN3-208ENST00000555034 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
FOXN3-208ENST00000555034 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
FOXN3-208ENST00000555034 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
FOXN3-208ENST00000555034 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
FOXN3-208ENST00000555034 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
FOXN3-208ENST00000555034 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
FOXN3-208ENST00000555034 GLI2P10070 1586 aa13.08□□□□□ -0.32
FOXN3-208ENST00000555034 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
FOXN3-208ENST00000555034 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
FOXN3-208ENST00000555034 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
FOXN3-208ENST00000555034 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
FOXN3-208ENST00000555034 KDM6BO15054 1643 aa13.06□□□□□ -0.32
FOXN3-208ENST00000555034 TTBK1Q5TCY1 1321 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-208ENST00000555034 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
FOXN3-208ENST00000555034 KIAA0556O60303 1618 aa13.02□□□□□ -0.32
FOXN3-208ENST00000555034 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
FOXN3-208ENST00000555034 EPRSP07814 1512 aaKnown RBP13□□□□□ -0.33
FOXN3-208ENST00000555034 HAX1O00165 279 aa12.99□□□□□ -0.33
FOXN3-208ENST00000555034 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
FOXN3-208ENST00000555034 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-208ENST00000555034 WDR7Q9Y4E6 1490 aa12.97□□□□□ -0.33
FOXN3-208ENST00000555034 EEA1Q15075 1411 aa12.96□□□□□ -0.34
FOXN3-208ENST00000555034 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.34
FOXN3-208ENST00000555034 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
FOXN3-208ENST00000555034 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
FOXN3-208ENST00000555034 MAP3K4Q9Y6R4 1608 aa12.94□□□□□ -0.34
FOXN3-208ENST00000555034 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
FOXN3-208ENST00000555034 TSPOAP1O95153 1857 aa12.93□□□□□ -0.34
FOXN3-208ENST00000555034 KDM4FA0A1W2PPD8 638 aa12.92□□□□□ -0.34
FOXN3-208ENST00000555034 ABCA8O94911 1581 aa12.92□□□□□ -0.34
FOXN3-208ENST00000555034 MAGI3Q5TCQ9 1506 aa12.92□□□□□ -0.34
FOXN3-208ENST00000555034 CD109Q6YHK3 1445 aa12.91□□□□□ -0.34
FOXN3-208ENST00000555034 PHLDB1Q86UU1 1377 aa12.91□□□□□ -0.34
FOXN3-208ENST00000555034 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
FOXN3-208ENST00000555034 EVX2Q03828 476 aa12.88□□□□□ -0.35
FOXN3-208ENST00000555034 KCNH8Q96L42 1107 aa12.87□□□□□ -0.35
FOXN3-208ENST00000555034 CFAP43Q8NDM7 1665 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms