RNA–Protein interactions for RNA: ENST00000554960.1

SIPA1L1-208, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 5

Gene SIPA1L1, Length 1,136 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-208ENST00000554960 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
SIPA1L1-208ENST00000554960 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
SIPA1L1-208ENST00000554960 CFTRP13569 1480 aa17.58■□□□□ 0.41
SIPA1L1-208ENST00000554960 PIP4P2Q8N4L2 257 aa17.54■□□□□ 0.4
SIPA1L1-208ENST00000554960 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
SIPA1L1-208ENST00000554960 FANCD2Q9BXW9 1451 aa17.49■□□□□ 0.39
SIPA1L1-208ENST00000554960 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
SIPA1L1-208ENST00000554960 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
SIPA1L1-208ENST00000554960 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
SIPA1L1-208ENST00000554960 FKBP8Q14318 412 aa17.44■□□□□ 0.38
SIPA1L1-208ENST00000554960 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
SIPA1L1-208ENST00000554960 PROM2Q8N271 834 aa17.37■□□□□ 0.37
SIPA1L1-208ENST00000554960 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
SIPA1L1-208ENST00000554960 MRC2Q9UBG0 1479 aa17.36■□□□□ 0.37
SIPA1L1-208ENST00000554960 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
SIPA1L1-208ENST00000554960 THOC2Q8NI27 1593 aaKnown RBP17.31■□□□□ 0.36
SIPA1L1-208ENST00000554960 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
SIPA1L1-208ENST00000554960 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
SIPA1L1-208ENST00000554960 CUX2O14529 1486 aa17.25■□□□□ 0.35
SIPA1L1-208ENST00000554960 ABCC8Q09428 1581 aa17.25■□□□□ 0.35
SIPA1L1-208ENST00000554960 WDR62O43379 1518 aa17.25■□□□□ 0.35
SIPA1L1-208ENST00000554960 TOPBP1Q92547 1522 aa17.21■□□□□ 0.34
SIPA1L1-208ENST00000554960 DNMBPQ6XZF7 1577 aa17.2■□□□□ 0.34
SIPA1L1-208ENST00000554960 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
SIPA1L1-208ENST00000554960 CUX1P39880 1505 aa17.15■□□□□ 0.34
SIPA1L1-208ENST00000554960 HAX1O00165 279 aa17.11■□□□□ 0.33
SIPA1L1-208ENST00000554960 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
SIPA1L1-208ENST00000554960 FGD5Q6ZNL6 1462 aa17.08■□□□□ 0.32
SIPA1L1-208ENST00000554960 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
SIPA1L1-208ENST00000554960 SOGA1O94964 1423 aa17.07■□□□□ 0.32
SIPA1L1-208ENST00000554960 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
SIPA1L1-208ENST00000554960 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
SIPA1L1-208ENST00000554960 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
SIPA1L1-208ENST00000554960 FARP1Q9Y4F1 1045 aaPredicted RBP17.05■□□□□ 0.32
SIPA1L1-208ENST00000554960 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
SIPA1L1-208ENST00000554960 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
SIPA1L1-208ENST00000554960 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
SIPA1L1-208ENST00000554960 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
SIPA1L1-208ENST00000554960 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
SIPA1L1-208ENST00000554960 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
SIPA1L1-208ENST00000554960 C19orf67A6NJJ6 358 aa16.93■□□□□ 0.3
SIPA1L1-208ENST00000554960 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
SIPA1L1-208ENST00000554960 EVX2Q03828 476 aa16.91■□□□□ 0.3
SIPA1L1-208ENST00000554960 MIER1Q8N108 512 aa16.91■□□□□ 0.3
SIPA1L1-208ENST00000554960 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
SIPA1L1-208ENST00000554960 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
SIPA1L1-208ENST00000554960 EIF4G3O43432 1585 aaKnown RBP16.88■□□□□ 0.29
SIPA1L1-208ENST00000554960 SP7Q8TDD2 431 aaPredicted RBP16.87■□□□□ 0.29
SIPA1L1-208ENST00000554960 MNX1P50219 401 aaPredicted RBP16.86■□□□□ 0.29
SIPA1L1-208ENST00000554960 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
SIPA1L1-208ENST00000554960 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
SIPA1L1-208ENST00000554960 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
SIPA1L1-208ENST00000554960 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
SIPA1L1-208ENST00000554960 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
SIPA1L1-208ENST00000554960 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
SIPA1L1-208ENST00000554960 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
SIPA1L1-208ENST00000554960 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
SIPA1L1-208ENST00000554960 ABCA5Q8WWZ7 1642 aa16.79■□□□□ 0.28
SIPA1L1-208ENST00000554960 PBRM1Q86U86 1689 aa16.77■□□□□ 0.28
SIPA1L1-208ENST00000554960 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
SIPA1L1-208ENST00000554960 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
SIPA1L1-208ENST00000554960 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
SIPA1L1-208ENST00000554960 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
SIPA1L1-208ENST00000554960 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
SIPA1L1-208ENST00000554960 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
SIPA1L1-208ENST00000554960 RUSC2Q8N2Y8 1516 aa16.69■□□□□ 0.26
SIPA1L1-208ENST00000554960 IGF1RP08069 1367 aa16.68■□□□□ 0.26
SIPA1L1-208ENST00000554960 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
SIPA1L1-208ENST00000554960 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
SIPA1L1-208ENST00000554960 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
SIPA1L1-208ENST00000554960 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
SIPA1L1-208ENST00000554960 ZBTB47Q9UFB7 747 aaPredicted RBP16.65■□□□□ 0.26
SIPA1L1-208ENST00000554960 CHD1O14646 1710 aa16.64■□□□□ 0.25
SIPA1L1-208ENST00000554960 ADAMTS12P58397 1594 aa16.63■□□□□ 0.25
SIPA1L1-208ENST00000554960 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
SIPA1L1-208ENST00000554960 EEA1Q15075 1411 aa16.62■□□□□ 0.25
SIPA1L1-208ENST00000554960 CUL7Q14999 1698 aa16.62■□□□□ 0.25
SIPA1L1-208ENST00000554960 GRIN2AQ12879 1464 aa16.58■□□□□ 0.24
SIPA1L1-208ENST00000554960 ZNF579Q8NAF0 562 aaKnown RBP16.57■□□□□ 0.24
SIPA1L1-208ENST00000554960 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
SIPA1L1-208ENST00000554960 GABBR2O75899 941 aa16.56■□□□□ 0.24
SIPA1L1-208ENST00000554960 RASEFQ8IZ41 740 aa16.54■□□□□ 0.24
SIPA1L1-208ENST00000554960 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
SIPA1L1-208ENST00000554960 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
SIPA1L1-208ENST00000554960 PHF12Q96QT6 1004 aa16.51■□□□□ 0.23
SIPA1L1-208ENST00000554960 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
SIPA1L1-208ENST00000554960 NUBP1P53384 320 aa16.49■□□□□ 0.23
SIPA1L1-208ENST00000554960 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
SIPA1L1-208ENST00000554960 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
SIPA1L1-208ENST00000554960 NUP160Q12769 1436 aa16.46■□□□□ 0.23
SIPA1L1-208ENST00000554960 UBTFP17480 764 aaKnown RBP16.43■□□□□ 0.22
SIPA1L1-208ENST00000554960 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
SIPA1L1-208ENST00000554960 CLCN6P51797 869 aa16.42■□□□□ 0.22
SIPA1L1-208ENST00000554960 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
SIPA1L1-208ENST00000554960 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
SIPA1L1-208ENST00000554960 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
SIPA1L1-208ENST00000554960 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
SIPA1L1-208ENST00000554960 KIF21BO75037 1637 aa16.39■□□□□ 0.21
SIPA1L1-208ENST00000554960 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
SIPA1L1-208ENST00000554960 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms