RNA–Protein interactions for RNA: ENST00000554960.1

SIPA1L1-208, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 5

Gene SIPA1L1, Length 1,136 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-208ENST00000554960 AEBP2Q6ZN18 517 aaPredicted RBP32.63■■■□□ 2.81
SIPA1L1-208ENST00000554960 CHIC1Q5VXU3 224 aa31.47■■■□□ 2.63
SIPA1L1-208ENST00000554960 SENP3Q9H4L4 574 aaPredicted RBP27.74■■■□□ 2.03
SIPA1L1-208ENST00000554960 PHF23Q9BUL5 403 aaPredicted RBP27.64■■■□□ 2.02
SIPA1L1-208ENST00000554960 FOXD1Q16676 465 aa25.8■■□□□ 1.72
SIPA1L1-208ENST00000554960 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
SIPA1L1-208ENST00000554960 PPP6R1Q9UPN7 881 aa24.52■■□□□ 1.52
SIPA1L1-208ENST00000554960 ADRA2BP18089 450 aa24.5■■□□□ 1.51
SIPA1L1-208ENST00000554960 PIAS4Q8N2W9 510 aaPredicted RBP24.26■■□□□ 1.47
SIPA1L1-208ENST00000554960 MSH5O43196 834 aa23.94■■□□□ 1.42
SIPA1L1-208ENST00000554960 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
SIPA1L1-208ENST00000554960 POTEDQ86YR6 584 aa22.5■■□□□ 1.19
SIPA1L1-208ENST00000554960 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
SIPA1L1-208ENST00000554960 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
SIPA1L1-208ENST00000554960 PPP4R3CPQ6ZMV5 832 aa22.33■■□□□ 1.17
SIPA1L1-208ENST00000554960 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
SIPA1L1-208ENST00000554960 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
SIPA1L1-208ENST00000554960 NCBP3Q53F19 620 aaKnown RBP21.63■■□□□ 1.05
SIPA1L1-208ENST00000554960 HOXD11P31277 338 aaPredicted RBP21.44■■□□□ 1.02
SIPA1L1-208ENST00000554960 RNF216Q9NWF9 866 aaPredicted RBP21.44■■□□□ 1.02
SIPA1L1-208ENST00000554960 KCNA4P22459 653 aa21.39■■□□□ 1.01
SIPA1L1-208ENST00000554960 NPM3O75607 178 aaKnown RBP21.32■■□□□ 1
SIPA1L1-208ENST00000554960 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
SIPA1L1-208ENST00000554960 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
SIPA1L1-208ENST00000554960 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
SIPA1L1-208ENST00000554960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.87
SIPA1L1-208ENST00000554960 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
SIPA1L1-208ENST00000554960 ABCC9O60706 1549 aa20.4■□□□□ 0.86
SIPA1L1-208ENST00000554960 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
SIPA1L1-208ENST00000554960 CACNB1Q02641 598 aaPredicted RBP20.27■□□□□ 0.84
SIPA1L1-208ENST00000554960 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
SIPA1L1-208ENST00000554960 C1QBPQ07021 282 aaKnown RBP20.19■□□□□ 0.82
SIPA1L1-208ENST00000554960 U3KPZ7 1027 aaPredicted RBP20.1■□□□□ 0.81
SIPA1L1-208ENST00000554960 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
SIPA1L1-208ENST00000554960 FOXD4L1Q9NU39 408 aa19.79■□□□□ 0.76
SIPA1L1-208ENST00000554960 ZCCHC6Q5VYS8 1495 aaKnown RBP19.79■□□□□ 0.76
SIPA1L1-208ENST00000554960 MYCNP04198 464 aaPredicted RBP19.71■□□□□ 0.75
SIPA1L1-208ENST00000554960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
SIPA1L1-208ENST00000554960 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
SIPA1L1-208ENST00000554960 NACADO15069 1562 aa19.69■□□□□ 0.74
SIPA1L1-208ENST00000554960 RB1CC1Q8TDY2 1594 aa19.69■□□□□ 0.74
SIPA1L1-208ENST00000554960 ZBTB22O15209 634 aa19.68■□□□□ 0.74
SIPA1L1-208ENST00000554960 SPINK5Q9NQ38 1064 aaPredicted RBP19.68■□□□□ 0.74
SIPA1L1-208ENST00000554960 CAPN15O75808 1086 aa19.64■□□□□ 0.73
SIPA1L1-208ENST00000554960 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
SIPA1L1-208ENST00000554960 APLP2Q06481 763 aa19.6■□□□□ 0.73
SIPA1L1-208ENST00000554960 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
SIPA1L1-208ENST00000554960 MYO15BQ96JP2 1530 aa19.58■□□□□ 0.73
SIPA1L1-208ENST00000554960 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
SIPA1L1-208ENST00000554960 ZNF219Q9P2Y4 722 aaPredicted RBP19.4■□□□□ 0.7
SIPA1L1-208ENST00000554960 DSG3P32926 999 aa19.35■□□□□ 0.69
SIPA1L1-208ENST00000554960 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
SIPA1L1-208ENST00000554960 ABCB7O75027 752 aa19.24■□□□□ 0.67
SIPA1L1-208ENST00000554960 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
SIPA1L1-208ENST00000554960 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
SIPA1L1-208ENST00000554960 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
SIPA1L1-208ENST00000554960 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
SIPA1L1-208ENST00000554960 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
SIPA1L1-208ENST00000554960 ATXN8OSP0DMR3 200 aa19.1■□□□□ 0.65
SIPA1L1-208ENST00000554960 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
SIPA1L1-208ENST00000554960 POLA2Q14181 598 aa19.01■□□□□ 0.63
SIPA1L1-208ENST00000554960 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
SIPA1L1-208ENST00000554960 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
SIPA1L1-208ENST00000554960 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
SIPA1L1-208ENST00000554960 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
SIPA1L1-208ENST00000554960 FBLN2P98095 1184 aa18.45■□□□□ 0.54
SIPA1L1-208ENST00000554960 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
SIPA1L1-208ENST00000554960 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
SIPA1L1-208ENST00000554960 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
SIPA1L1-208ENST00000554960 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
SIPA1L1-208ENST00000554960 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
SIPA1L1-208ENST00000554960 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
SIPA1L1-208ENST00000554960 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
SIPA1L1-208ENST00000554960 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
SIPA1L1-208ENST00000554960 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
SIPA1L1-208ENST00000554960 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
SIPA1L1-208ENST00000554960 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
SIPA1L1-208ENST00000554960 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
SIPA1L1-208ENST00000554960 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
SIPA1L1-208ENST00000554960 WIZO95785 1651 aa18.12■□□□□ 0.49
SIPA1L1-208ENST00000554960 SPDYE2BA6NHP3 402 aa18.12■□□□□ 0.49
SIPA1L1-208ENST00000554960 SPDYE6P0CI01 402 aa18.12■□□□□ 0.49
SIPA1L1-208ENST00000554960 SPDYE2Q495Y8 402 aa18.12■□□□□ 0.49
SIPA1L1-208ENST00000554960 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
SIPA1L1-208ENST00000554960 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
SIPA1L1-208ENST00000554960 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
SIPA1L1-208ENST00000554960 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.48
SIPA1L1-208ENST00000554960 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
SIPA1L1-208ENST00000554960 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
SIPA1L1-208ENST00000554960 SSUH2Q9Y2M2 353 aa17.93■□□□□ 0.46
SIPA1L1-208ENST00000554960 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
SIPA1L1-208ENST00000554960 PITPNM1O00562 1244 aa17.79■□□□□ 0.44
SIPA1L1-208ENST00000554960 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
SIPA1L1-208ENST00000554960 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
SIPA1L1-208ENST00000554960 POTEHQ6S545 545 aa17.74■□□□□ 0.43
SIPA1L1-208ENST00000554960 SPDYE1Q8NFV5 336 aaPredicted RBP17.69■□□□□ 0.42
SIPA1L1-208ENST00000554960 NESP48681 1621 aa17.69■□□□□ 0.42
SIPA1L1-208ENST00000554960 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
SIPA1L1-208ENST00000554960 CLEC11AQ9Y240 323 aa17.67■□□□□ 0.42
SIPA1L1-208ENST00000554960 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms