RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 TNIKQ9UKE5 1360 aa16.78■□□□□ 0.28
TMEM55B-205ENST00000554028 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-205ENST00000554028 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-205ENST00000554028 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
TMEM55B-205ENST00000554028 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.28
TMEM55B-205ENST00000554028 FBLN2P98095 1184 aa16.76■□□□□ 0.27
TMEM55B-205ENST00000554028 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
TMEM55B-205ENST00000554028 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
TMEM55B-205ENST00000554028 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
TMEM55B-205ENST00000554028 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
TMEM55B-205ENST00000554028 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
TMEM55B-205ENST00000554028 CLIP1P30622 1438 aa16.6■□□□□ 0.25
TMEM55B-205ENST00000554028 KIAA0586Q9BVV6 1533 aa16.56■□□□□ 0.24
TMEM55B-205ENST00000554028 NUP160Q12769 1436 aa16.54■□□□□ 0.24
TMEM55B-205ENST00000554028 CTTNBP2Q8WZ74 1663 aa16.53■□□□□ 0.24
TMEM55B-205ENST00000554028 IQGAP2Q13576 1575 aa16.51■□□□□ 0.23
TMEM55B-205ENST00000554028 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
TMEM55B-205ENST00000554028 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
TMEM55B-205ENST00000554028 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
TMEM55B-205ENST00000554028 CHD1O14646 1710 aa16.48■□□□□ 0.23
TMEM55B-205ENST00000554028 P3H3Q8IVL6 736 aa16.47■□□□□ 0.23
TMEM55B-205ENST00000554028 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.23
TMEM55B-205ENST00000554028 ARHGAP35Q9NRY4 1499 aa16.45■□□□□ 0.22
TMEM55B-205ENST00000554028 CARMIL2Q6F5E8 1435 aa16.45■□□□□ 0.22
TMEM55B-205ENST00000554028 UGGT2Q9NYU1 1516 aa16.43■□□□□ 0.22
TMEM55B-205ENST00000554028 APLP2Q06481 763 aa16.41■□□□□ 0.22
TMEM55B-205ENST00000554028 VPS8Q8N3P4 1428 aa16.39■□□□□ 0.21
TMEM55B-205ENST00000554028 ARAP1Q96P48 1450 aa16.39■□□□□ 0.21
TMEM55B-205ENST00000554028 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
TMEM55B-205ENST00000554028 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
TMEM55B-205ENST00000554028 PRG4Q92954 1404 aaPredicted RBP16.37■□□□□ 0.21
TMEM55B-205ENST00000554028 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
TMEM55B-205ENST00000554028 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
TMEM55B-205ENST00000554028 ATP1B4Q9UN42 357 aaPredicted RBP16.34■□□□□ 0.21
TMEM55B-205ENST00000554028 TTBK1Q5TCY1 1321 aaPredicted RBP16.34■□□□□ 0.21
TMEM55B-205ENST00000554028 DISP1Q96F81 1524 aa16.34■□□□□ 0.21
TMEM55B-205ENST00000554028 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
TMEM55B-205ENST00000554028 SHROOM2Q13796 1616 aa16.29■□□□□ 0.2
TMEM55B-205ENST00000554028 PTPRGP23470 1445 aa16.28■□□□□ 0.2
TMEM55B-205ENST00000554028 CASKIN1Q8WXD9 1431 aa16.27■□□□□ 0.19
TMEM55B-205ENST00000554028 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
TMEM55B-205ENST00000554028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
TMEM55B-205ENST00000554028 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
TMEM55B-205ENST00000554028 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
TMEM55B-205ENST00000554028 PPARGC1BQ86YN6 1023 aaKnown RBP16.17■□□□□ 0.18
TMEM55B-205ENST00000554028 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
TMEM55B-205ENST00000554028 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
TMEM55B-205ENST00000554028 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
TMEM55B-205ENST00000554028 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
TMEM55B-205ENST00000554028 MAP3K1Q13233 1512 aa16.15■□□□□ 0.18
TMEM55B-205ENST00000554028 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
TMEM55B-205ENST00000554028 PLB1Q6P1J6 1458 aa16.15■□□□□ 0.18
TMEM55B-205ENST00000554028 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
TMEM55B-205ENST00000554028 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
TMEM55B-205ENST00000554028 ABCA8O94911 1581 aa16.11■□□□□ 0.17
TMEM55B-205ENST00000554028 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-205ENST00000554028 TIAM1Q13009 1591 aa16.1■□□□□ 0.17
TMEM55B-205ENST00000554028 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
TMEM55B-205ENST00000554028 MTUS2Q5JR59 1369 aa16.1■□□□□ 0.17
TMEM55B-205ENST00000554028 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
TMEM55B-205ENST00000554028 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
TMEM55B-205ENST00000554028 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
TMEM55B-205ENST00000554028 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
TMEM55B-205ENST00000554028 UHRF1BP1LA0JNW5 1464 aa16.07■□□□□ 0.16
TMEM55B-205ENST00000554028 LRRC9Q6ZRR7 1453 aa16.07■□□□□ 0.16
TMEM55B-205ENST00000554028 ABCC2Q92887 1545 aa16.06■□□□□ 0.16
TMEM55B-205ENST00000554028 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
TMEM55B-205ENST00000554028 CYB5RLQ6IPT4 315 aa16.04■□□□□ 0.16
TMEM55B-205ENST00000554028 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
TMEM55B-205ENST00000554028 ATP10BO94823 1461 aa16.03■□□□□ 0.16
TMEM55B-205ENST00000554028 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.16
TMEM55B-205ENST00000554028 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
TMEM55B-205ENST00000554028 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
TMEM55B-205ENST00000554028 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
TMEM55B-205ENST00000554028 EHBP1L1Q8N3D4 1523 aa15.99■□□□□ 0.15
TMEM55B-205ENST00000554028 KDM5BQ9UGL1 1544 aa15.98■□□□□ 0.15
TMEM55B-205ENST00000554028 TROQ12816 1431 aaPredicted RBP15.97■□□□□ 0.15
TMEM55B-205ENST00000554028 LRRIQ1Q96JM4 1722 aa15.95■□□□□ 0.14
TMEM55B-205ENST00000554028 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
TMEM55B-205ENST00000554028 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
TMEM55B-205ENST00000554028 KCNH8Q96L42 1107 aa15.92■□□□□ 0.14
TMEM55B-205ENST00000554028 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
TMEM55B-205ENST00000554028 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
TMEM55B-205ENST00000554028 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
TMEM55B-205ENST00000554028 MAGI3Q5TCQ9 1506 aa15.91■□□□□ 0.14
TMEM55B-205ENST00000554028 ZCCHC11Q5TAX3 1644 aaKnown RBP15.9■□□□□ 0.14
TMEM55B-205ENST00000554028 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
TMEM55B-205ENST00000554028 PHLDB1Q86UU1 1377 aa15.88■□□□□ 0.13
TMEM55B-205ENST00000554028 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
TMEM55B-205ENST00000554028 KIF14Q15058 1648 aa15.86■□□□□ 0.13
TMEM55B-205ENST00000554028 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
TMEM55B-205ENST00000554028 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
TMEM55B-205ENST00000554028 WDR7Q9Y4E6 1490 aa15.85■□□□□ 0.13
TMEM55B-205ENST00000554028 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
TMEM55B-205ENST00000554028 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
TMEM55B-205ENST00000554028 CFDP1Q9UEE9 299 aaPredicted RBP15.84■□□□□ 0.13
TMEM55B-205ENST00000554028 RRBP1Q9P2E9 1410 aaKnown RBP15.84■□□□□ 0.13
TMEM55B-205ENST00000554028 FGD6Q6ZV73 1430 aa15.82■□□□□ 0.12
TMEM55B-205ENST00000554028 MIA2Q96PC5 1412 aa15.82■□□□□ 0.12
TMEM55B-205ENST00000554028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms