RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 CFTRP13569 1480 aa12.46□□□□□ -0.42
CCNK-203ENST00000553865 NEFMP07197 916 aa12.44□□□□□ -0.42
CCNK-203ENST00000553865 MTUS2Q5JR59 1369 aa12.43□□□□□ -0.42
CCNK-203ENST00000553865 CC2D2AQ9P2K1 1620 aa12.43□□□□□ -0.42
CCNK-203ENST00000553865 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
CCNK-203ENST00000553865 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
CCNK-203ENST00000553865 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCNK-203ENST00000553865 CANXP27824 592 aaKnown RBP12.39□□□□□ -0.43
CCNK-203ENST00000553865 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
CCNK-203ENST00000553865 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
CCNK-203ENST00000553865 FMN1Q68DA7 1419 aa12.37□□□□□ -0.43
CCNK-203ENST00000553865 CARMIL2Q6F5E8 1435 aa12.36□□□□□ -0.43
CCNK-203ENST00000553865 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
CCNK-203ENST00000553865 NPM2Q86SE8 214 aaKnown RBP12.34□□□□□ -0.43
CCNK-203ENST00000553865 TOP2BQ02880 1626 aa12.34□□□□□ -0.43
CCNK-203ENST00000553865 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
CCNK-203ENST00000553865 KIF21BO75037 1637 aa12.32□□□□□ -0.44
CCNK-203ENST00000553865 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
CCNK-203ENST00000553865 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
CCNK-203ENST00000553865 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
CCNK-203ENST00000553865 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
CCNK-203ENST00000553865 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
CCNK-203ENST00000553865 FKBP8Q14318 412 aa12.28□□□□□ -0.44
CCNK-203ENST00000553865 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.44
CCNK-203ENST00000553865 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.44
CCNK-203ENST00000553865 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
CCNK-203ENST00000553865 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
CCNK-203ENST00000553865 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
CCNK-203ENST00000553865 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCNK-203ENST00000553865 TSPY4P0CV99 314 aa12.25□□□□□ -0.45
CCNK-203ENST00000553865 TSPY10P0CW01 314 aa12.25□□□□□ -0.45
CCNK-203ENST00000553865 CHIC2Q9UKJ5 165 aa12.25□□□□□ -0.45
CCNK-203ENST00000553865 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
CCNK-203ENST00000553865 ESF1Q9H501 851 aaKnown RBP12.24□□□□□ -0.45
CCNK-203ENST00000553865 MIER1Q8N108 512 aa12.24□□□□□ -0.45
CCNK-203ENST00000553865 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
CCNK-203ENST00000553865 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
CCNK-203ENST00000553865 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
CCNK-203ENST00000553865 ARHGAP35Q9NRY4 1499 aa12.21□□□□□ -0.46
CCNK-203ENST00000553865 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
CCNK-203ENST00000553865 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
CCNK-203ENST00000553865 TOPBP1Q92547 1522 aa12.19□□□□□ -0.46
CCNK-203ENST00000553865 CCNB3Q8WWL7 1395 aa12.19□□□□□ -0.46
CCNK-203ENST00000553865 IGF1RP08069 1367 aa12.19□□□□□ -0.46
CCNK-203ENST00000553865 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
CCNK-203ENST00000553865 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCNK-203ENST00000553865 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
CCNK-203ENST00000553865 EFCAB5A4FU69 1503 aa12.17□□□□□ -0.46
CCNK-203ENST00000553865 CUX1P39880 1505 aa12.17□□□□□ -0.46
CCNK-203ENST00000553865 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
CCNK-203ENST00000553865 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
CCNK-203ENST00000553865 NBR1Q14596 966 aa12.16□□□□□ -0.46
CCNK-203ENST00000553865 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
CCNK-203ENST00000553865 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
CCNK-203ENST00000553865 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CCNK-203ENST00000553865 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
CCNK-203ENST00000553865 CFDP1Q9UEE9 299 aaPredicted RBP12.14□□□□□ -0.47
CCNK-203ENST00000553865 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
CCNK-203ENST00000553865 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CCNK-203ENST00000553865 RRP7BPQ9NSQ0 103 aa12.13□□□□□ -0.47
CCNK-203ENST00000553865 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
CCNK-203ENST00000553865 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
CCNK-203ENST00000553865 ARXQ96QS3 562 aa12.11□□□□□ -0.47
CCNK-203ENST00000553865 RUSC2Q8N2Y8 1516 aa12.11□□□□□ -0.47
CCNK-203ENST00000553865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCNK-203ENST00000553865 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
CCNK-203ENST00000553865 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
CCNK-203ENST00000553865 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
CCNK-203ENST00000553865 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
CCNK-203ENST00000553865 CCDC136Q96JN2 1154 aa12.09□□□□□ -0.47
CCNK-203ENST00000553865 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
CCNK-203ENST00000553865 ANP32EQ9BTT0 268 aa12.08□□□□□ -0.48
CCNK-203ENST00000553865 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
CCNK-203ENST00000553865 WDR43Q15061 677 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCNK-203ENST00000553865 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
CCNK-203ENST00000553865 PRDM2Q13029 1718 aa12.06□□□□□ -0.48
CCNK-203ENST00000553865 NESP48681 1621 aa12.05□□□□□ -0.48
CCNK-203ENST00000553865 FHOD3Q2V2M9 1422 aa12.05□□□□□ -0.48
CCNK-203ENST00000553865 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
CCNK-203ENST00000553865 FYCO1Q9BQS8 1478 aa12.04□□□□□ -0.48
CCNK-203ENST00000553865 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
CCNK-203ENST00000553865 JPH4Q96JJ6 628 aa12.02□□□□□ -0.48
CCNK-203ENST00000553865 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
CCNK-203ENST00000553865 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
CCNK-203ENST00000553865 NCLP19338 710 aaKnown RBP11.99□□□□□ -0.49
CCNK-203ENST00000553865 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
CCNK-203ENST00000553865 KANK1Q14678 1352 aa11.98□□□□□ -0.49
CCNK-203ENST00000553865 PTPRGP23470 1445 aa11.98□□□□□ -0.49
CCNK-203ENST00000553865 ANKRD30AQ9BXX3 1397 aa11.97□□□□□ -0.49
CCNK-203ENST00000553865 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
CCNK-203ENST00000553865 SIN3AQ96ST3 1273 aa11.97□□□□□ -0.49
CCNK-203ENST00000553865 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
CCNK-203ENST00000553865 DDRGK1Q96HY6 314 aa11.97□□□□□ -0.49
CCNK-203ENST00000553865 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
CCNK-203ENST00000553865 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■■■■□ 20
CCNK-203ENST00000553865 GOLGA6L22H0YM25 854 aa11.96□□□□□ -0.49
CCNK-203ENST00000553865 EFCAB2Q5VUJ9 269 aa11.95□□□□□ -0.5
CCNK-203ENST00000553865 BECN1Q14457 450 aa11.95□□□□□ -0.5
CCNK-203ENST00000553865 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
CCNK-203ENST00000553865 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms