RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
TMEM55B-204ENST00000553602 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
TMEM55B-204ENST00000553602 PRXQ9BXM0 1461 aa7.91□□□□□ -1.14
TMEM55B-204ENST00000553602 DIEXFQ68CQ4 756 aaKnown RBP7.89□□□□□ -1.15
TMEM55B-204ENST00000553602 NCAPD3P42695 1498 aa7.88□□□□□ -1.15
TMEM55B-204ENST00000553602 RAPGEF2Q9Y4G8 1499 aa7.88□□□□□ -1.15
TMEM55B-204ENST00000553602 UBTFP17480 764 aaKnown RBP7.88□□□□□ -1.15
TMEM55B-204ENST00000553602 CUX2O14529 1486 aa7.87□□□□□ -1.15
TMEM55B-204ENST00000553602 PRDM2Q13029 1718 aa7.86□□□□□ -1.15
TMEM55B-204ENST00000553602 SLC24A1O60721 1099 aa7.86□□□□□ -1.15
TMEM55B-204ENST00000553602 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
TMEM55B-204ENST00000553602 MAP3K1Q13233 1512 aa7.84□□□□□ -1.15
TMEM55B-204ENST00000553602 ARAP1Q96P48 1450 aa7.84□□□□□ -1.15
TMEM55B-204ENST00000553602 RRBP1Q9P2E9 1410 aaKnown RBP7.84□□□□□ -1.15
TMEM55B-204ENST00000553602 CFTRP13569 1480 aa7.83□□□□□ -1.16
TMEM55B-204ENST00000553602 CUX1P39880 1505 aa7.83□□□□□ -1.16
TMEM55B-204ENST00000553602 NEUROD1Q13562 356 aa7.82□□□□□ -1.16
TMEM55B-204ENST00000553602 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
TMEM55B-204ENST00000553602 SPDYE4A6NLX3 237 aa7.81□□□□□ -1.16
TMEM55B-204ENST00000553602 FBLN2P98095 1184 aa7.81□□□□□ -1.16
TMEM55B-204ENST00000553602 FBXO3Q9UK99 471 aa7.81□□□□□ -1.16
TMEM55B-204ENST00000553602 TRHP20396 242 aaPredicted RBP7.8□□□□□ -1.16
TMEM55B-204ENST00000553602 MYT1Q01538 1121 aa7.79□□□□□ -1.16
TMEM55B-204ENST00000553602 PABPN1Q86U42 306 aaKnown RBP eCLIP7.79□□□□□ -1.16
TMEM55B-204ENST00000553602 MKRN4PQ13434 485 aaPredicted RBP7.78□□□□□ -1.16
TMEM55B-204ENST00000553602 SPINK5Q9NQ38 1064 aaPredicted RBP7.77□□□□□ -1.17
TMEM55B-204ENST00000553602 DHX57Q6P158 1386 aaKnown RBP7.76□□□□□ -1.17
TMEM55B-204ENST00000553602 CAPN15O75808 1086 aa7.76□□□□□ -1.17
TMEM55B-204ENST00000553602 POLA2Q14181 598 aa7.76□□□□□ -1.17
TMEM55B-204ENST00000553602 ARHGAP35Q9NRY4 1499 aa7.75□□□□□ -1.17
TMEM55B-204ENST00000553602 GTF3C3Q9Y5Q9 886 aa7.74□□□□□ -1.17
TMEM55B-204ENST00000553602 CFAP43Q8NDM7 1665 aa7.73□□□□□ -1.17
TMEM55B-204ENST00000553602 TIAM1Q13009 1591 aa7.73□□□□□ -1.17
TMEM55B-204ENST00000553602 PROM2Q8N271 834 aa7.72□□□□□ -1.17
TMEM55B-204ENST00000553602 CCNB3Q8WWL7 1395 aa7.71□□□□□ -1.17
TMEM55B-204ENST00000553602 ZBTB12Q9Y330 459 aaPredicted RBP7.71□□□□□ -1.18
TMEM55B-204ENST00000553602 EFCAB5A4FU69 1503 aa7.7□□□□□ -1.18
TMEM55B-204ENST00000553602 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
TMEM55B-204ENST00000553602 FHAD1B1AJZ9 1412 aa7.69□□□□□ -1.18
TMEM55B-204ENST00000553602 AQRO60306 1485 aaKnown RBP eCLIP7.69□□□□□ -1.18
TMEM55B-204ENST00000553602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.69□□□□□ -1.18
TMEM55B-204ENST00000553602 CC2D2AQ9P2K1 1620 aa7.68□□□□□ -1.18
TMEM55B-204ENST00000553602 CUL7Q14999 1698 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 MIER1Q8N108 512 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 IGF1RP08069 1367 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 LRRC9Q6ZRR7 1453 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 FYCO1Q9BQS8 1478 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 MAPKBP1O60336 1514 aa7.67□□□□□ -1.18
TMEM55B-204ENST00000553602 VASPP50552 380 aaPredicted RBP7.66□□□□□ -1.18
TMEM55B-204ENST00000553602 DNMBPQ6XZF7 1577 aa7.65□□□□□ -1.18
TMEM55B-204ENST00000553602 FGD5Q6ZNL6 1462 aa7.65□□□□□ -1.18
TMEM55B-204ENST00000553602 PCF11O94913 1555 aaKnown RBP7.64□□□□□ -1.19
TMEM55B-204ENST00000553602 THOC2Q8NI27 1593 aaKnown RBP7.64□□□□□ -1.19
TMEM55B-204ENST00000553602 ABCA10Q8WWZ4 1543 aa7.64□□□□□ -1.19
TMEM55B-204ENST00000553602 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
TMEM55B-204ENST00000553602 TIMELESSQ9UNS1 1208 aa7.64□□□□□ -1.19
TMEM55B-204ENST00000553602 CARMIL1Q5VZK9 1371 aa7.63□□□□□ -1.19
TMEM55B-204ENST00000553602 ABCB7O75027 752 aa7.63□□□□□ -1.19
TMEM55B-204ENST00000553602 SETD5Q9C0A6 1442 aa7.62□□□□□ -1.19
TMEM55B-204ENST00000553602 KIF21AQ7Z4S6 1674 aa7.62□□□□□ -1.19
TMEM55B-204ENST00000553602 CTTNBP2Q8WZ74 1663 aa7.62□□□□□ -1.19
TMEM55B-204ENST00000553602 CASKIN1Q8WXD9 1431 aa7.61□□□□□ -1.19
TMEM55B-204ENST00000553602 RAB3GAP2Q9H2M9 1393 aa7.61□□□□□ -1.19
TMEM55B-204ENST00000553602 WDR97A6NE52 1622 aa7.61□□□□□ -1.19
TMEM55B-204ENST00000553602 FANCD2Q9BXW9 1451 aa7.59□□□□□ -1.19
TMEM55B-204ENST00000553602 SAMD9Q5K651 1589 aa7.59□□□□□ -1.2
TMEM55B-204ENST00000553602 FMN1Q68DA7 1419 aa7.58□□□□□ -1.2
TMEM55B-204ENST00000553602 PHLDB1Q86UU1 1377 aa7.58□□□□□ -1.2
TMEM55B-204ENST00000553602 TOPBP1Q92547 1522 aa7.57□□□□□ -1.2
TMEM55B-204ENST00000553602 SNAPC4Q5SXM2 1469 aa7.57□□□□□ -1.2
TMEM55B-204ENST00000553602 ABCA5Q8WWZ7 1642 aa7.56□□□□□ -1.2
TMEM55B-204ENST00000553602 POLA1P09884 1462 aaPredicted RBP7.56□□□□□ -1.2
TMEM55B-204ENST00000553602 LAMC3Q9Y6N6 1575 aa7.56□□□□□ -1.2
TMEM55B-204ENST00000553602 AKNAQ7Z591 1439 aa7.55□□□□□ -1.2
TMEM55B-204ENST00000553602 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
TMEM55B-204ENST00000553602 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
TMEM55B-204ENST00000553602 HFM1A2PYH4 1435 aa7.54□□□□□ -1.2
TMEM55B-204ENST00000553602 FGD6Q6ZV73 1430 aa7.54□□□□□ -1.2
TMEM55B-204ENST00000553602 EHBP1L1Q8N3D4 1523 aa7.54□□□□□ -1.2
TMEM55B-204ENST00000553602 DSG3P32926 999 aa7.54□□□□□ -1.2
TMEM55B-204ENST00000553602 ARHGEF11O15085 1522 aa7.53□□□□□ -1.2
TMEM55B-204ENST00000553602 UACAQ9BZF9 1416 aa7.52□□□□□ -1.2
TMEM55B-204ENST00000553602 PTPN23Q9H3S7 1636 aa7.52□□□□□ -1.21
TMEM55B-204ENST00000553602 GRIN2BQ13224 1484 aa7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 CCDC18Q5T9S5 1454 aa7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 SUPT16HQ9Y5B9 1047 aaKnown RBP7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 SUPT6HQ7KZ85 1726 aaKnown RBP7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 HECW1Q76N89 1606 aa7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 FHOD3Q2V2M9 1422 aa7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 GCC2Q8IWJ2 1684 aa7.51□□□□□ -1.21
TMEM55B-204ENST00000553602 TCOF1Q13428 1488 aaKnown RBP7.5□□□□□ -1.21
TMEM55B-204ENST00000553602 SPDYE2BA6NHP3 402 aa7.5□□□□□ -1.21
TMEM55B-204ENST00000553602 SPDYE6P0CI01 402 aa7.5□□□□□ -1.21
TMEM55B-204ENST00000553602 RANGAP1P46060 587 aaPredicted RBP7.5□□□□□ -1.21
TMEM55B-204ENST00000553602 SPDYE2Q495Y8 402 aa7.5□□□□□ -1.21
TMEM55B-204ENST00000553602 MYOM3Q5VTT5 1437 aa7.5□□□□□ -1.21
TMEM55B-204ENST00000553602 UGGT2Q9NYU1 1516 aa7.49□□□□□ -1.21
TMEM55B-204ENST00000553602 CCER2I3L3R5 266 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms