RNA–Protein interactions for RNA: ENST00000552915.5

CNOT2-241, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-241ENST00000552915 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
CNOT2-241ENST00000552915 MKRN4PQ13434 485 aaPredicted RBP20.31■□□□□ 0.84
CNOT2-241ENST00000552915 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
CNOT2-241ENST00000552915 WDR62O43379 1518 aa20.27■□□□□ 0.83
CNOT2-241ENST00000552915 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
CNOT2-241ENST00000552915 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
CNOT2-241ENST00000552915 FBLN2P98095 1184 aa20.18■□□□□ 0.82
CNOT2-241ENST00000552915 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
CNOT2-241ENST00000552915 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
CNOT2-241ENST00000552915 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
CNOT2-241ENST00000552915 DNAJC5Q9H3Z4 198 aa20.12■□□□□ 0.81
CNOT2-241ENST00000552915 SOGA1O94964 1423 aa20.11■□□□□ 0.81
CNOT2-241ENST00000552915 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
CNOT2-241ENST00000552915 CUX2O14529 1486 aa20.07■□□□□ 0.8
CNOT2-241ENST00000552915 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
CNOT2-241ENST00000552915 OSCARQ8IYS5 282 aa20.04■□□□□ 0.8
CNOT2-241ENST00000552915 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
CNOT2-241ENST00000552915 ABCA10Q8WWZ4 1543 aa20.03■□□□□ 0.8
CNOT2-241ENST00000552915 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
CNOT2-241ENST00000552915 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
CNOT2-241ENST00000552915 EEA1Q15075 1411 aa19.98■□□□□ 0.79
CNOT2-241ENST00000552915 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
CNOT2-241ENST00000552915 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
CNOT2-241ENST00000552915 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.79
CNOT2-241ENST00000552915 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
CNOT2-241ENST00000552915 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
CNOT2-241ENST00000552915 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
CNOT2-241ENST00000552915 CUL7Q14999 1698 aa19.84■□□□□ 0.77
CNOT2-241ENST00000552915 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
CNOT2-241ENST00000552915 KIF21BO75037 1637 aa19.82■□□□□ 0.76
CNOT2-241ENST00000552915 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
CNOT2-241ENST00000552915 IGF1RP08069 1367 aa19.78■□□□□ 0.76
CNOT2-241ENST00000552915 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
CNOT2-241ENST00000552915 ADAMTS12P58397 1594 aa19.77■□□□□ 0.76
CNOT2-241ENST00000552915 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
CNOT2-241ENST00000552915 RBM42Q9BTD8 480 aaKnown RBP19.76■□□□□ 0.75
CNOT2-241ENST00000552915 GOLGA3Q08378 1498 aa19.75■□□□□ 0.75
CNOT2-241ENST00000552915 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
CNOT2-241ENST00000552915 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
CNOT2-241ENST00000552915 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
CNOT2-241ENST00000552915 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
CNOT2-241ENST00000552915 SPDYE4A6NLX3 237 aa19.73■□□□□ 0.75
CNOT2-241ENST00000552915 FKBP8Q14318 412 aa19.73■□□□□ 0.75
CNOT2-241ENST00000552915 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
CNOT2-241ENST00000552915 RAPGEF2Q9Y4G8 1499 aa19.73■□□□□ 0.75
CNOT2-241ENST00000552915 ZNF692Q9BU19 519 aaPredicted RBP19.69■□□□□ 0.74
CNOT2-241ENST00000552915 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
CNOT2-241ENST00000552915 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
CNOT2-241ENST00000552915 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
CNOT2-241ENST00000552915 CHD1O14646 1710 aa19.66■□□□□ 0.74
CNOT2-241ENST00000552915 SSUH2Q9Y2M2 353 aa19.66■□□□□ 0.74
CNOT2-241ENST00000552915 CTTNBP2Q8WZ74 1663 aa19.64■□□□□ 0.73
CNOT2-241ENST00000552915 SYNJ2O15056 1496 aa19.61■□□□□ 0.73
CNOT2-241ENST00000552915 CHMP7Q8WUX9 453 aaPredicted RBP19.58■□□□□ 0.72
CNOT2-241ENST00000552915 GRIN2AQ12879 1464 aa19.58■□□□□ 0.72
CNOT2-241ENST00000552915 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
CNOT2-241ENST00000552915 AKT1S1Q96B36 256 aa19.54■□□□□ 0.72
CNOT2-241ENST00000552915 TNIKQ9UKE5 1360 aa19.53■□□□□ 0.72
CNOT2-241ENST00000552915 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
CNOT2-241ENST00000552915 IQGAP2Q13576 1575 aa19.46■□□□□ 0.71
CNOT2-241ENST00000552915 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
CNOT2-241ENST00000552915 PROM2Q8N271 834 aa19.44■□□□□ 0.7
CNOT2-241ENST00000552915 REM2Q8IYK8 340 aaPredicted RBP19.41■□□□□ 0.7
CNOT2-241ENST00000552915 CLIP1P30622 1438 aa19.4■□□□□ 0.7
CNOT2-241ENST00000552915 NUP160Q12769 1436 aa19.4■□□□□ 0.7
CNOT2-241ENST00000552915 KIAA0586Q9BVV6 1533 aa19.37■□□□□ 0.69
CNOT2-241ENST00000552915 EFCAB5A4FU69 1503 aa19.31■□□□□ 0.68
CNOT2-241ENST00000552915 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
CNOT2-241ENST00000552915 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
CNOT2-241ENST00000552915 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
CNOT2-241ENST00000552915 SAMD9Q5K651 1589 aa19.3■□□□□ 0.68
CNOT2-241ENST00000552915 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
CNOT2-241ENST00000552915 KIAA0556O60303 1618 aa19.27■□□□□ 0.68
CNOT2-241ENST00000552915 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
CNOT2-241ENST00000552915 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
CNOT2-241ENST00000552915 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
CNOT2-241ENST00000552915 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
CNOT2-241ENST00000552915 PITPNM1O00562 1244 aa19.21■□□□□ 0.67
CNOT2-241ENST00000552915 JPH4Q96JJ6 628 aa19.21■□□□□ 0.67
CNOT2-241ENST00000552915 DISP1Q96F81 1524 aa19.2■□□□□ 0.66
CNOT2-241ENST00000552915 CARMIL2Q6F5E8 1435 aa19.19■□□□□ 0.66
CNOT2-241ENST00000552915 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
CNOT2-241ENST00000552915 SPDYE1Q8NFV5 336 aaPredicted RBP19.17■□□□□ 0.66
CNOT2-241ENST00000552915 ERCC6L2Q5T890 1561 aa19.17■□□□□ 0.66
CNOT2-241ENST00000552915 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
CNOT2-241ENST00000552915 PCF11O94913 1555 aaKnown RBP19.15■□□□□ 0.66
CNOT2-241ENST00000552915 CLEC11AQ9Y240 323 aa19.14■□□□□ 0.65
CNOT2-241ENST00000552915 FMN1Q68DA7 1419 aa19.1■□□□□ 0.65
CNOT2-241ENST00000552915 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
CNOT2-241ENST00000552915 HECW1Q76N89 1606 aa19.05■□□□□ 0.64
CNOT2-241ENST00000552915 RAPGEF6Q8TEU7 1601 aa19.05■□□□□ 0.64
CNOT2-241ENST00000552915 CHRDL2Q6WN34 429 aa19.03■□□□□ 0.64
CNOT2-241ENST00000552915 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
CNOT2-241ENST00000552915 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
CNOT2-241ENST00000552915 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
CNOT2-241ENST00000552915 PTPRGP23470 1445 aa19.01■□□□□ 0.63
CNOT2-241ENST00000552915 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
CNOT2-241ENST00000552915 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
CNOT2-241ENST00000552915 ARHGEF11O15085 1522 aa19■□□□□ 0.63
CNOT2-241ENST00000552915 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms