RNA–Protein interactions for RNA: ENST00000552546.5

TMEM106C-219, Transcript of transmembrane protein 106C, humanhuman

TSL 4 BASIC

Gene TMEM106C, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-219ENST00000552546 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
TMEM106C-219ENST00000552546 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
TMEM106C-219ENST00000552546 CUX2O14529 1486 aa13.46□□□□□ -0.25
TMEM106C-219ENST00000552546 URB2Q14146 1524 aaKnown RBP13.45□□□□□ -0.26
TMEM106C-219ENST00000552546 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
TMEM106C-219ENST00000552546 WDR62O43379 1518 aa13.44□□□□□ -0.26
TMEM106C-219ENST00000552546 THOC2Q8NI27 1593 aaKnown RBP13.42□□□□□ -0.26
TMEM106C-219ENST00000552546 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
TMEM106C-219ENST00000552546 PRDM2Q13029 1718 aa13.41□□□□□ -0.26
TMEM106C-219ENST00000552546 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
TMEM106C-219ENST00000552546 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
TMEM106C-219ENST00000552546 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
TMEM106C-219ENST00000552546 CUX1P39880 1505 aa13.35□□□□□ -0.27
TMEM106C-219ENST00000552546 SOGA1O94964 1423 aa13.33□□□□□ -0.28
TMEM106C-219ENST00000552546 IFT140Q96RY7 1462 aa13.32□□□□□ -0.28
TMEM106C-219ENST00000552546 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
TMEM106C-219ENST00000552546 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
TMEM106C-219ENST00000552546 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
TMEM106C-219ENST00000552546 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
TMEM106C-219ENST00000552546 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
TMEM106C-219ENST00000552546 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
TMEM106C-219ENST00000552546 SYNJ1O43426 1573 aa13.25□□□□□ -0.29
TMEM106C-219ENST00000552546 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
TMEM106C-219ENST00000552546 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
TMEM106C-219ENST00000552546 BIVM-ERCC5R4GMW8 1640 aa13.21□□□□□ -0.29
TMEM106C-219ENST00000552546 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
TMEM106C-219ENST00000552546 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.36e-6■■■■□ 25.1
TMEM106C-219ENST00000552546 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
TMEM106C-219ENST00000552546 TARBP1Q13395 1621 aaKnown RBP13.2□□□□□ -0.3
TMEM106C-219ENST00000552546 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
TMEM106C-219ENST00000552546 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
TMEM106C-219ENST00000552546 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
TMEM106C-219ENST00000552546 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
TMEM106C-219ENST00000552546 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
TMEM106C-219ENST00000552546 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
TMEM106C-219ENST00000552546 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
TMEM106C-219ENST00000552546 IGF1RP08069 1367 aa13.09□□□□□ -0.31
TMEM106C-219ENST00000552546 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
TMEM106C-219ENST00000552546 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
TMEM106C-219ENST00000552546 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
TMEM106C-219ENST00000552546 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
TMEM106C-219ENST00000552546 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
TMEM106C-219ENST00000552546 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
TMEM106C-219ENST00000552546 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
TMEM106C-219ENST00000552546 FHAD1B1AJZ9 1412 aa13.02□□□□□ -0.33
TMEM106C-219ENST00000552546 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
TMEM106C-219ENST00000552546 SYNJ2O15056 1496 aa13□□□□□ -0.33
TMEM106C-219ENST00000552546 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
TMEM106C-219ENST00000552546 MIER1Q8N108 512 aa13□□□□□ -0.33
TMEM106C-219ENST00000552546 PLCD3Q8N3E9 789 aa13□□□□□ -0.33
TMEM106C-219ENST00000552546 EEA1Q15075 1411 aa12.99□□□□□ -0.33
TMEM106C-219ENST00000552546 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
TMEM106C-219ENST00000552546 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
TMEM106C-219ENST00000552546 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
TMEM106C-219ENST00000552546 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
TMEM106C-219ENST00000552546 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
TMEM106C-219ENST00000552546 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
TMEM106C-219ENST00000552546 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
TMEM106C-219ENST00000552546 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
TMEM106C-219ENST00000552546 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
TMEM106C-219ENST00000552546 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
TMEM106C-219ENST00000552546 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
TMEM106C-219ENST00000552546 ADAMTS12P58397 1594 aa12.9□□□□□ -0.34
TMEM106C-219ENST00000552546 RAPGEF2Q9Y4G8 1499 aa12.9□□□□□ -0.34
TMEM106C-219ENST00000552546 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
TMEM106C-219ENST00000552546 NUP160Q12769 1436 aa12.88□□□□□ -0.35
TMEM106C-219ENST00000552546 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
TMEM106C-219ENST00000552546 CUL7Q14999 1698 aa12.86□□□□□ -0.35
TMEM106C-219ENST00000552546 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
TMEM106C-219ENST00000552546 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
TMEM106C-219ENST00000552546 SPOCK2Q92563 424 aa12.82□□□□□ -0.36
TMEM106C-219ENST00000552546 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
TMEM106C-219ENST00000552546 CHD1O14646 1710 aa12.8□□□□□ -0.36
TMEM106C-219ENST00000552546 CEP170Q5SW79 1584 aa12.79□□□□□ -0.36
TMEM106C-219ENST00000552546 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
TMEM106C-219ENST00000552546 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
TMEM106C-219ENST00000552546 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
TMEM106C-219ENST00000552546 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
TMEM106C-219ENST00000552546 PRG4Q92954 1404 aaPredicted RBP12.74□□□□□ -0.37
TMEM106C-219ENST00000552546 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMEM106C-219ENST00000552546 KIF21BO75037 1637 aa12.73□□□□□ -0.37
TMEM106C-219ENST00000552546 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
TMEM106C-219ENST00000552546 LOC105371045A0A1W2PR82 267 aa12.7□□□□□ -0.38
TMEM106C-219ENST00000552546 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
TMEM106C-219ENST00000552546 CARMIL2Q6F5E8 1435 aa12.7□□□□□ -0.38
TMEM106C-219ENST00000552546 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
TMEM106C-219ENST00000552546 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
TMEM106C-219ENST00000552546 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
TMEM106C-219ENST00000552546 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
TMEM106C-219ENST00000552546 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
TMEM106C-219ENST00000552546 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
TMEM106C-219ENST00000552546 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
TMEM106C-219ENST00000552546 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMEM106C-219ENST00000552546 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
TMEM106C-219ENST00000552546 PIP4P2Q8N4L2 257 aa12.66□□□□□ -0.38
TMEM106C-219ENST00000552546 PTPRGP23470 1445 aa12.64□□□□□ -0.39
TMEM106C-219ENST00000552546 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
TMEM106C-219ENST00000552546 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
TMEM106C-219ENST00000552546 NUBP1P53384 320 aa12.62□□□□□ -0.39
TMEM106C-219ENST00000552546 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms