RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 IGF1RP08069 1367 aa14.48□□□□□ -0.09
TMEM116-213ENST00000550831 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
TMEM116-213ENST00000550831 PCGF6Q9BYE7 350 aa14.46□□□□□ -0.09
TMEM116-213ENST00000550831 CLIP1P30622 1438 aa14.44□□□□□ -0.1
TMEM116-213ENST00000550831 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
TMEM116-213ENST00000550831 CUL7Q14999 1698 aa14.4□□□□□ -0.1
TMEM116-213ENST00000550831 RAD54L2Q9Y4B4 1467 aa14.4□□□□□ -0.1
TMEM116-213ENST00000550831 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
TMEM116-213ENST00000550831 ABCA5Q8WWZ7 1642 aa14.4□□□□□ -0.1
TMEM116-213ENST00000550831 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
TMEM116-213ENST00000550831 CARMIL1Q5VZK9 1371 aa14.39□□□□□ -0.11
TMEM116-213ENST00000550831 VPS8Q8N3P4 1428 aa14.39□□□□□ -0.11
TMEM116-213ENST00000550831 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
TMEM116-213ENST00000550831 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
TMEM116-213ENST00000550831 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
TMEM116-213ENST00000550831 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
TMEM116-213ENST00000550831 HRCP23327 699 aa14.3□□□□□ -0.12
TMEM116-213ENST00000550831 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
TMEM116-213ENST00000550831 CHD1O14646 1710 aa14.29□□□□□ -0.12
TMEM116-213ENST00000550831 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
TMEM116-213ENST00000550831 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
TMEM116-213ENST00000550831 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
TMEM116-213ENST00000550831 CYB5RLQ6IPT4 315 aa14.24□□□□□ -0.13
TMEM116-213ENST00000550831 EFCAB5A4FU69 1503 aa14.23□□□□□ -0.13
TMEM116-213ENST00000550831 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
TMEM116-213ENST00000550831 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
TMEM116-213ENST00000550831 AQRO60306 1485 aaKnown RBP eCLIP14.21□□□□□ -0.148e-7■■■■■ 28.7
TMEM116-213ENST00000550831 MAP3K1Q13233 1512 aa14.21□□□□□ -0.14
TMEM116-213ENST00000550831 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
TMEM116-213ENST00000550831 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
TMEM116-213ENST00000550831 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
TMEM116-213ENST00000550831 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
TMEM116-213ENST00000550831 SAMD9Q5K651 1589 aa14.14□□□□□ -0.15
TMEM116-213ENST00000550831 APLP2Q06481 763 aa14.14□□□□□ -0.15
TMEM116-213ENST00000550831 FBLN2P98095 1184 aa14.13□□□□□ -0.15
TMEM116-213ENST00000550831 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
TMEM116-213ENST00000550831 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
TMEM116-213ENST00000550831 ZEB1P37275 1124 aaPredicted RBP14.1□□□□□ -0.15
TMEM116-213ENST00000550831 SNAPC4Q5SXM2 1469 aa14.1□□□□□ -0.15
TMEM116-213ENST00000550831 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
TMEM116-213ENST00000550831 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.16
TMEM116-213ENST00000550831 CFAP43Q8NDM7 1665 aa14.07□□□□□ -0.16
TMEM116-213ENST00000550831 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-213ENST00000550831 FMN1Q68DA7 1419 aa14.06□□□□□ -0.16
TMEM116-213ENST00000550831 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
TMEM116-213ENST00000550831 RANGAP1P46060 587 aaPredicted RBP14.06□□□□□ -0.16
TMEM116-213ENST00000550831 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
TMEM116-213ENST00000550831 PCF11O94913 1555 aaKnown RBP14.04□□□□□ -0.16
TMEM116-213ENST00000550831 IQGAP2Q13576 1575 aa14.04□□□□□ -0.16
TMEM116-213ENST00000550831 RRBP1Q9P2E9 1410 aaKnown RBP14.03□□□□□ -0.16
TMEM116-213ENST00000550831 UGGT2Q9NYU1 1516 aa14.03□□□□□ -0.16
TMEM116-213ENST00000550831 FHOD3Q2V2M9 1422 aa14.02□□□□□ -0.17
TMEM116-213ENST00000550831 SYNJ2O15056 1496 aa14.01□□□□□ -0.17
TMEM116-213ENST00000550831 KIAA0586Q9BVV6 1533 aa14□□□□□ -0.17
TMEM116-213ENST00000550831 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
TMEM116-213ENST00000550831 GRIN2AQ12879 1464 aa14□□□□□ -0.17
TMEM116-213ENST00000550831 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
TMEM116-213ENST00000550831 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
TMEM116-213ENST00000550831 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
TMEM116-213ENST00000550831 TTBK1Q5TCY1 1321 aaPredicted RBP13.93□□□□□ -0.18
TMEM116-213ENST00000550831 NUP160Q12769 1436 aa13.93□□□□□ -0.18
TMEM116-213ENST00000550831 LRRIQ1Q96JM4 1722 aa13.91□□□□□ -0.18
TMEM116-213ENST00000550831 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
TMEM116-213ENST00000550831 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
TMEM116-213ENST00000550831 KIAA0556O60303 1618 aa13.9□□□□□ -0.18
TMEM116-213ENST00000550831 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
TMEM116-213ENST00000550831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
TMEM116-213ENST00000550831 P3H3Q8IVL6 736 aa13.9□□□□□ -0.19
TMEM116-213ENST00000550831 HECW1Q76N89 1606 aa13.89□□□□□ -0.19
TMEM116-213ENST00000550831 DISP1Q96F81 1524 aa13.89□□□□□ -0.19
TMEM116-213ENST00000550831 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
TMEM116-213ENST00000550831 ERCC6L2Q5T890 1561 aa13.84□□□□□ -0.19
TMEM116-213ENST00000550831 PHLDB1Q86UU1 1377 aa13.84□□□□□ -0.19
TMEM116-213ENST00000550831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
TMEM116-213ENST00000550831 CCER1Q8TC90 406 aaPredicted RBP13.83□□□□□ -0.2
TMEM116-213ENST00000550831 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
TMEM116-213ENST00000550831 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
TMEM116-213ENST00000550831 SHROOM2Q13796 1616 aa13.81□□□□□ -0.2
TMEM116-213ENST00000550831 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
TMEM116-213ENST00000550831 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
TMEM116-213ENST00000550831 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
TMEM116-213ENST00000550831 MTUS2Q5JR59 1369 aa13.78□□□□□ -0.2
TMEM116-213ENST00000550831 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
TMEM116-213ENST00000550831 NCOA2Q15596 1464 aa13.77□□□□□ -0.21
TMEM116-213ENST00000550831 MAGI3Q5TCQ9 1506 aa13.76□□□□□ -0.21
TMEM116-213ENST00000550831 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
TMEM116-213ENST00000550831 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
TMEM116-213ENST00000550831 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
TMEM116-213ENST00000550831 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
TMEM116-213ENST00000550831 MYOM3Q5VTT5 1437 aa13.75□□□□□ -0.21
TMEM116-213ENST00000550831 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
TMEM116-213ENST00000550831 JPH4Q96JJ6 628 aa13.74□□□□□ -0.21
TMEM116-213ENST00000550831 ATP1B4Q9UN42 357 aaPredicted RBP13.73□□□□□ -0.21
TMEM116-213ENST00000550831 TCOF1Q13428 1488 aaKnown RBP13.73□□□□□ -0.21
TMEM116-213ENST00000550831 ZBTB22O15209 634 aa13.73□□□□□ -0.21
TMEM116-213ENST00000550831 ABCA8O94911 1581 aa13.71□□□□□ -0.21
TMEM116-213ENST00000550831 MIA2Q96PC5 1412 aa13.71□□□□□ -0.22
TMEM116-213ENST00000550831 CDK13Q14004 1512 aaKnown RBP13.7□□□□□ -0.22
TMEM116-213ENST00000550831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM116-213ENST00000550831 DHX57Q6P158 1386 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms