RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 DNMBPQ6XZF7 1577 aa16.18■□□□□ 0.18
ATP2B1-207ENST00000550716 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
ATP2B1-207ENST00000550716 FBLN2P98095 1184 aa16.17■□□□□ 0.18
ATP2B1-207ENST00000550716 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
ATP2B1-207ENST00000550716 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
ATP2B1-207ENST00000550716 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
ATP2B1-207ENST00000550716 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATP2B1-207ENST00000550716 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
ATP2B1-207ENST00000550716 TARBP1Q13395 1621 aaKnown RBP16.13■□□□□ 0.17
ATP2B1-207ENST00000550716 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
ATP2B1-207ENST00000550716 ARHGEF11O15085 1522 aa16.11■□□□□ 0.17
ATP2B1-207ENST00000550716 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
ATP2B1-207ENST00000550716 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
ATP2B1-207ENST00000550716 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
ATP2B1-207ENST00000550716 CHD1O14646 1710 aa16.03■□□□□ 0.16
ATP2B1-207ENST00000550716 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
ATP2B1-207ENST00000550716 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
ATP2B1-207ENST00000550716 SOGA1O94964 1423 aa16■□□□□ 0.15
ATP2B1-207ENST00000550716 CUX1P39880 1505 aa15.99■□□□□ 0.15
ATP2B1-207ENST00000550716 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
ATP2B1-207ENST00000550716 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
ATP2B1-207ENST00000550716 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
ATP2B1-207ENST00000550716 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
ATP2B1-207ENST00000550716 WDR97A6NE52 1622 aa15.87■□□□□ 0.13
ATP2B1-207ENST00000550716 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
ATP2B1-207ENST00000550716 MAGI1Q96QZ7 1491 aaPredicted RBP15.86■□□□□ 0.13
ATP2B1-207ENST00000550716 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
ATP2B1-207ENST00000550716 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
ATP2B1-207ENST00000550716 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
ATP2B1-207ENST00000550716 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
ATP2B1-207ENST00000550716 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
ATP2B1-207ENST00000550716 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
ATP2B1-207ENST00000550716 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
ATP2B1-207ENST00000550716 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
ATP2B1-207ENST00000550716 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
ATP2B1-207ENST00000550716 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
ATP2B1-207ENST00000550716 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
ATP2B1-207ENST00000550716 PBRM1Q86U86 1689 aa15.78■□□□□ 0.12
ATP2B1-207ENST00000550716 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
ATP2B1-207ENST00000550716 SSUH2Q9Y2M2 353 aa15.7■□□□□ 0.1
ATP2B1-207ENST00000550716 ERCC6L2Q5T890 1561 aa15.7■□□□□ 0.1
ATP2B1-207ENST00000550716 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
ATP2B1-207ENST00000550716 ADAMTS12P58397 1594 aa15.68■□□□□ 0.1
ATP2B1-207ENST00000550716 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
ATP2B1-207ENST00000550716 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
ATP2B1-207ENST00000550716 BIVM-ERCC5R4GMW8 1640 aa15.66■□□□□ 0.1
ATP2B1-207ENST00000550716 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
ATP2B1-207ENST00000550716 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
ATP2B1-207ENST00000550716 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
ATP2B1-207ENST00000550716 NUP160Q12769 1436 aa15.64■□□□□ 0.09
ATP2B1-207ENST00000550716 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
ATP2B1-207ENST00000550716 ERICH3Q5RHP9 1530 aa15.56■□□□□ 0.08
ATP2B1-207ENST00000550716 SHROOM2Q13796 1616 aa15.56■□□□□ 0.08
ATP2B1-207ENST00000550716 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
ATP2B1-207ENST00000550716 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
ATP2B1-207ENST00000550716 PRG4Q92954 1404 aaPredicted RBP15.49■□□□□ 0.07
ATP2B1-207ENST00000550716 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
ATP2B1-207ENST00000550716 FKBP8Q14318 412 aa15.45■□□□□ 0.06
ATP2B1-207ENST00000550716 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
ATP2B1-207ENST00000550716 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
ATP2B1-207ENST00000550716 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
ATP2B1-207ENST00000550716 IGF1RP08069 1367 aa15.39■□□□□ 0.05
ATP2B1-207ENST00000550716 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
ATP2B1-207ENST00000550716 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
ATP2B1-207ENST00000550716 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
ATP2B1-207ENST00000550716 ADCY10Q96PN6 1610 aa15.33■□□□□ 0.04
ATP2B1-207ENST00000550716 ABCC10Q5T3U5 1492 aa15.31■□□□□ 0.04
ATP2B1-207ENST00000550716 CUL7Q14999 1698 aa15.3■□□□□ 0.04
ATP2B1-207ENST00000550716 MAPKBP1O60336 1514 aa15.29■□□□□ 0.04
ATP2B1-207ENST00000550716 POTEHQ6S545 545 aa15.29■□□□□ 0.04
ATP2B1-207ENST00000550716 PROM2Q8N271 834 aa15.29■□□□□ 0.04
ATP2B1-207ENST00000550716 DIP2BQ9P265 1576 aa15.28■□□□□ 0.04
ATP2B1-207ENST00000550716 FAM69CQ0P6D2 419 aa15.28■□□□□ 0.04
ATP2B1-207ENST00000550716 CARMIL1Q5VZK9 1371 aa15.25■□□□□ 0.03
ATP2B1-207ENST00000550716 PIP4P2Q8N4L2 257 aa15.25■□□□□ 0.03
ATP2B1-207ENST00000550716 NPM1P06748 294 aaKnown RBP eCLIP15.24■□□□□ 0.03
ATP2B1-207ENST00000550716 TTBK1Q5TCY1 1321 aaPredicted RBP15.22■□□□□ 0.03
ATP2B1-207ENST00000550716 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
ATP2B1-207ENST00000550716 FXR2P51116 673 aaKnown RBP eCLIP15.22■□□□□ 0.03
ATP2B1-207ENST00000550716 PTPRGP23470 1445 aa15.21■□□□□ 0.03
ATP2B1-207ENST00000550716 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
ATP2B1-207ENST00000550716 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
ATP2B1-207ENST00000550716 IQGAP2Q13576 1575 aa15.18■□□□□ 0.02
ATP2B1-207ENST00000550716 ABCC2Q92887 1545 aa15.16■□□□□ 0.02
ATP2B1-207ENST00000550716 DISP1Q96F81 1524 aa15.16■□□□□ 0.02
ATP2B1-207ENST00000550716 CARMIL2Q6F5E8 1435 aa15.15■□□□□ 0.02
ATP2B1-207ENST00000550716 KDM6BO15054 1643 aa15.14■□□□□ 0.01
ATP2B1-207ENST00000550716 ASXL2Q76L83 1435 aa15.12■□□□□ 0.01
ATP2B1-207ENST00000550716 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
ATP2B1-207ENST00000550716 RAPGEF2Q9Y4G8 1499 aa15.11■□□□□ 0.01
ATP2B1-207ENST00000550716 TSPOAP1O95153 1857 aa15.11■□□□□ 0.01
ATP2B1-207ENST00000550716 UHRF1BP1LA0JNW5 1464 aa15.1■□□□□ 0.01
ATP2B1-207ENST00000550716 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
ATP2B1-207ENST00000550716 UGGT2Q9NYU1 1516 aa15.09■□□□□ 0.01
ATP2B1-207ENST00000550716 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
ATP2B1-207ENST00000550716 CHADLQ6NUI6 762 aa15.08■□□□□ 0
ATP2B1-207ENST00000550716 PPRC1Q5VV67 1664 aaKnown RBP15.08■□□□□ 0
ATP2B1-207ENST00000550716 PLB1Q6P1J6 1458 aa15.07■□□□□ 0
ATP2B1-207ENST00000550716 KIAA0556O60303 1618 aa15.06■□□□□ 0
ATP2B1-207ENST00000550716 GLI2P10070 1586 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms