RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTPRR-210ENST00000550661 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
PTPRR-210ENST00000550661 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
PTPRR-210ENST00000550661 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
PTPRR-210ENST00000550661 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
PTPRR-210ENST00000550661 CCDC88BA6NC98 1476 aa10.53□□□□□ -0.72
PTPRR-210ENST00000550661 CREBZFQ9NS37 354 aa10.52□□□□□ -0.73
PTPRR-210ENST00000550661 LAMC3Q9Y6N6 1575 aa10.51□□□□□ -0.73
PTPRR-210ENST00000550661 MIER1Q8N108 512 aa10.48□□□□□ -0.73
PTPRR-210ENST00000550661 CFTRP13569 1480 aa10.48□□□□□ -0.73
PTPRR-210ENST00000550661 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
PTPRR-210ENST00000550661 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
PTPRR-210ENST00000550661 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
PTPRR-210ENST00000550661 PLEKHG5O94827 1062 aa10.44□□□□□ -0.74
PTPRR-210ENST00000550661 NESP48681 1621 aa10.44□□□□□ -0.74
PTPRR-210ENST00000550661 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
PTPRR-210ENST00000550661 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
PTPRR-210ENST00000550661 PDS5BQ9NTI5 1447 aa10.41□□□□□ -0.74
PTPRR-210ENST00000550661 HAX1O00165 279 aa10.39□□□□□ -0.75
PTPRR-210ENST00000550661 MNX1P50219 401 aaPredicted RBP10.38□□□□□ -0.75
PTPRR-210ENST00000550661 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
PTPRR-210ENST00000550661 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
PTPRR-210ENST00000550661 NPM1P06748 294 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRR-210ENST00000550661 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
PTPRR-210ENST00000550661 KIF21AQ7Z4S6 1674 aa10.34□□□□□ -0.75
PTPRR-210ENST00000550661 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
PTPRR-210ENST00000550661 THOC2Q8NI27 1593 aaKnown RBP10.31□□□□□ -0.76
PTPRR-210ENST00000550661 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
PTPRR-210ENST00000550661 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
PTPRR-210ENST00000550661 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
PTPRR-210ENST00000550661 CD44P16070 742 aaKnown RBP10.29□□□□□ -0.76
PTPRR-210ENST00000550661 WDR62O43379 1518 aa10.28□□□□□ -0.76
PTPRR-210ENST00000550661 EVX2Q03828 476 aa10.26□□□□□ -0.77
PTPRR-210ENST00000550661 DNMBPQ6XZF7 1577 aa10.26□□□□□ -0.77
PTPRR-210ENST00000550661 IFNLR1Q8IU57 520 aaPredicted RBP10.25□□□□□ -0.77
PTPRR-210ENST00000550661 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
PTPRR-210ENST00000550661 URB2Q14146 1524 aaKnown RBP10.24□□□□□ -0.77
PTPRR-210ENST00000550661 CUX2O14529 1486 aa10.23□□□□□ -0.77
PTPRR-210ENST00000550661 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
PTPRR-210ENST00000550661 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
PTPRR-210ENST00000550661 ZRANB1Q9UGI0 708 aa10.22□□□□□ -0.77
PTPRR-210ENST00000550661 WRNQ14191 1432 aaPredicted RBP eCLIP10.22□□□□□ -0.77
PTPRR-210ENST00000550661 CUX1P39880 1505 aa10.2□□□□□ -0.78
PTPRR-210ENST00000550661 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
PTPRR-210ENST00000550661 TOP2BQ02880 1626 aa10.19□□□□□ -0.78
PTPRR-210ENST00000550661 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
PTPRR-210ENST00000550661 NUBP1P53384 320 aa10.19□□□□□ -0.78
PTPRR-210ENST00000550661 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
PTPRR-210ENST00000550661 SP7Q8TDD2 431 aaPredicted RBP10.19□□□□□ -0.78
PTPRR-210ENST00000550661 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
PTPRR-210ENST00000550661 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
PTPRR-210ENST00000550661 POLA1P09884 1462 aaPredicted RBP10.16□□□□□ -0.78
PTPRR-210ENST00000550661 FGD5Q6ZNL6 1462 aa10.15□□□□□ -0.78
PTPRR-210ENST00000550661 FAM212AQ96EL1 285 aa10.14□□□□□ -0.79
PTPRR-210ENST00000550661 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
PTPRR-210ENST00000550661 ZNF579Q8NAF0 562 aaKnown RBP10.13□□□□□ -0.79
PTPRR-210ENST00000550661 DCAF8Q5TAQ9 597 aa10.11□□□□□ -0.79
PTPRR-210ENST00000550661 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
PTPRR-210ENST00000550661 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
PTPRR-210ENST00000550661 TARBP1Q13395 1621 aaKnown RBP10.1□□□□□ -0.79
PTPRR-210ENST00000550661 CCDC61Q9Y6R9 512 aa10.09□□□□□ -0.79
PTPRR-210ENST00000550661 ABCA10Q8WWZ4 1543 aa10.08□□□□□ -0.8
PTPRR-210ENST00000550661 SOGA1O94964 1423 aa10.07□□□□□ -0.8
PTPRR-210ENST00000550661 GABBR2O75899 941 aa10.07□□□□□ -0.8
PTPRR-210ENST00000550661 RAD54L2Q9Y4B4 1467 aa10.06□□□□□ -0.8
PTPRR-210ENST00000550661 GSE1Q14687 1217 aa10.06□□□□□ -0.8
PTPRR-210ENST00000550661 CIZ1Q9ULV3 898 aaPredicted RBP10.05□□□□□ -0.8
PTPRR-210ENST00000550661 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
PTPRR-210ENST00000550661 CLCN6P51797 869 aa10.04□□□□□ -0.8
PTPRR-210ENST00000550661 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
PTPRR-210ENST00000550661 ZNF608Q9ULD9 1512 aaPredicted RBP10.02□□□□□ -0.8
PTPRR-210ENST00000550661 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
PTPRR-210ENST00000550661 KIF12Q96FN5 646 aa10.01□□□□□ -0.81
PTPRR-210ENST00000550661 PYGBP11216 843 aa10□□□□□ -0.81
PTPRR-210ENST00000550661 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
PTPRR-210ENST00000550661 GAPVD1Q14C86 1478 aa9.99□□□□□ -0.81
PTPRR-210ENST00000550661 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
PTPRR-210ENST00000550661 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
PTPRR-210ENST00000550661 MAP3K13O43283 966 aa9.98□□□□□ -0.81
PTPRR-210ENST00000550661 TDRD9Q8NDG6 1382 aaKnown RBP9.98□□□□□ -0.81
PTPRR-210ENST00000550661 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
PTPRR-210ENST00000550661 AQRO60306 1485 aaKnown RBP eCLIP9.97□□□□□ -0.81
PTPRR-210ENST00000550661 ERICH3Q5RHP9 1530 aa9.97□□□□□ -0.81
PTPRR-210ENST00000550661 PBRM1Q86U86 1689 aa9.96□□□□□ -0.81
PTPRR-210ENST00000550661 MAGI1Q96QZ7 1491 aaPredicted RBP9.96□□□□□ -0.82
PTPRR-210ENST00000550661 PCDHB13Q9Y5F0 798 aa9.95□□□□□ -0.82
PTPRR-210ENST00000550661 EEA1Q15075 1411 aa9.95□□□□□ -0.82
PTPRR-210ENST00000550661 SNAPC4Q5SXM2 1469 aa9.94□□□□□ -0.82
PTPRR-210ENST00000550661 ADAMTS12P58397 1594 aa9.93□□□□□ -0.82
PTPRR-210ENST00000550661 CUL7Q14999 1698 aa9.93□□□□□ -0.82
PTPRR-210ENST00000550661 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
PTPRR-210ENST00000550661 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
PTPRR-210ENST00000550661 DCBLD2Q96PD2 775 aa9.91□□□□□ -0.82
PTPRR-210ENST00000550661 SYNJ2O15056 1496 aa9.91□□□□□ -0.82
PTPRR-210ENST00000550661 FHAD1B1AJZ9 1412 aa9.9□□□□□ -0.83
PTPRR-210ENST00000550661 IFNL1Q8IU54 200 aa9.89□□□□□ -0.83
PTPRR-210ENST00000550661 RUSC2Q8N2Y8 1516 aa9.88□□□□□ -0.83
PTPRR-210ENST00000550661 IGF1RP08069 1367 aa9.88□□□□□ -0.83
PTPRR-210ENST00000550661 PCDHB8Q9UN66 801 aa9.87□□□□□ -0.83
PTPRR-210ENST00000550661 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms