RNA–Protein interactions for RNA: ENST00000550262.1

ATP2A2-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 2

Gene ATP2A2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-210ENST00000550262 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
ATP2A2-210ENST00000550262 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
ATP2A2-210ENST00000550262 MYT1LQ9UL68 1186 aa9.68□□□□□ -0.86
ATP2A2-210ENST00000550262 NCOA2Q15596 1464 aa9.67□□□□□ -0.86
ATP2A2-210ENST00000550262 WASHC2AQ641Q2 1341 aa9.67□□□□□ -0.86
ATP2A2-210ENST00000550262 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
ATP2A2-210ENST00000550262 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
ATP2A2-210ENST00000550262 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
ATP2A2-210ENST00000550262 CEP164Q9UPV0 1460 aa9.65□□□□□ -0.87
ATP2A2-210ENST00000550262 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
ATP2A2-210ENST00000550262 CLIP1P30622 1438 aa9.64□□□□□ -0.87
ATP2A2-210ENST00000550262 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
ATP2A2-210ENST00000550262 SOGA1O94964 1423 aa9.63□□□□□ -0.87
ATP2A2-210ENST00000550262 E9PCH4 1651 aa9.63□□□□□ -0.87
ATP2A2-210ENST00000550262 RIMBP3CA6NJZ7 1639 aa9.63□□□□□ -0.87
ATP2A2-210ENST00000550262 RIMBP3BA6NNM3 1639 aa9.63□□□□□ -0.87
ATP2A2-210ENST00000550262 RIMBP3Q9UFD9 1639 aa9.63□□□□□ -0.87
ATP2A2-210ENST00000550262 BCANQ96GW7 911 aa9.62□□□□□ -0.87
ATP2A2-210ENST00000550262 PHF23Q9BUL5 403 aaPredicted RBP9.62□□□□□ -0.87
ATP2A2-210ENST00000550262 TOP2BQ02880 1626 aa9.61□□□□□ -0.87
ATP2A2-210ENST00000550262 RUSC2Q8N2Y8 1516 aa9.61□□□□□ -0.87
ATP2A2-210ENST00000550262 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
ATP2A2-210ENST00000550262 UBTFP17480 764 aaKnown RBP9.6□□□□□ -0.87
ATP2A2-210ENST00000550262 NESP48681 1621 aa9.59□□□□□ -0.87
ATP2A2-210ENST00000550262 LRRIQ1Q96JM4 1722 aa9.59□□□□□ -0.87
ATP2A2-210ENST00000550262 RNF123Q5XPI4 1314 aa9.58□□□□□ -0.88
ATP2A2-210ENST00000550262 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
ATP2A2-210ENST00000550262 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
ATP2A2-210ENST00000550262 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
ATP2A2-210ENST00000550262 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
ATP2A2-210ENST00000550262 GCC2Q8IWJ2 1684 aa9.54□□□□□ -0.88
ATP2A2-210ENST00000550262 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
ATP2A2-210ENST00000550262 KIF13AQ9H1H9 1805 aa9.53□□□□□ -0.88
ATP2A2-210ENST00000550262 HECW1Q76N89 1606 aa9.52□□□□□ -0.88
ATP2A2-210ENST00000550262 RANGAP1P46060 587 aaPredicted RBP9.52□□□□□ -0.89
ATP2A2-210ENST00000550262 DENND4BO75064 1496 aaPredicted RBP9.52□□□□□ -0.89
ATP2A2-210ENST00000550262 ATAD2BQ9ULI0 1458 aa9.5□□□□□ -0.89
ATP2A2-210ENST00000550262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATP2A2-210ENST00000550262 TIAM1Q13009 1591 aa9.48□□□□□ -0.89
ATP2A2-210ENST00000550262 MRC2Q9UBG0 1479 aa9.48□□□□□ -0.89
ATP2A2-210ENST00000550262 ITGAEP38570 1179 aa9.48□□□□□ -0.89
ATP2A2-210ENST00000550262 FKBP8Q14318 412 aa9.48□□□□□ -0.89
ATP2A2-210ENST00000550262 CTTNBP2Q8WZ74 1663 aa9.48□□□□□ -0.89
ATP2A2-210ENST00000550262 NCBP3Q53F19 620 aaKnown RBP9.47□□□□□ -0.89
ATP2A2-210ENST00000550262 ARHGEF11O15085 1522 aa9.46□□□□□ -0.89
ATP2A2-210ENST00000550262 CCER2I3L3R5 266 aa9.46□□□□□ -0.89
ATP2A2-210ENST00000550262 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
ATP2A2-210ENST00000550262 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
ATP2A2-210ENST00000550262 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
ATP2A2-210ENST00000550262 KDM6BO15054 1643 aa9.43□□□□□ -0.9
ATP2A2-210ENST00000550262 MYOM3Q5VTT5 1437 aa9.41□□□□□ -0.9
ATP2A2-210ENST00000550262 CHD1O14646 1710 aa9.41□□□□□ -0.9
ATP2A2-210ENST00000550262 GLI2P10070 1586 aa9.39□□□□□ -0.91
ATP2A2-210ENST00000550262 DEKP35659 375 aaKnown RBP9.38□□□□□ -0.91
ATP2A2-210ENST00000550262 RAPGEF2Q9Y4G8 1499 aa9.38□□□□□ -0.91
ATP2A2-210ENST00000550262 PBRM1Q86U86 1689 aa9.38□□□□□ -0.91
ATP2A2-210ENST00000550262 TRIM52Q96A61 297 aa9.38□□□□□ -0.91
ATP2A2-210ENST00000550262 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
ATP2A2-210ENST00000550262 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
ATP2A2-210ENST00000550262 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
ATP2A2-210ENST00000550262 MBD5Q9P267 1494 aa9.35□□□□□ -0.91
ATP2A2-210ENST00000550262 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
ATP2A2-210ENST00000550262 HIRIP3Q9BW71 556 aaPredicted RBP9.35□□□□□ -0.91
ATP2A2-210ENST00000550262 DDX10Q13206 875 aaKnown RBP9.35□□□□□ -0.91
ATP2A2-210ENST00000550262 PTPN23Q9H3S7 1636 aa9.35□□□□□ -0.91
ATP2A2-210ENST00000550262 SPATA31E1Q6ZUB1 1445 aa9.34□□□□□ -0.91
ATP2A2-210ENST00000550262 PPRC1Q5VV67 1664 aaKnown RBP9.34□□□□□ -0.91
ATP2A2-210ENST00000550262 KLHL34Q8N239 644 aa9.33□□□□□ -0.92
ATP2A2-210ENST00000550262 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
ATP2A2-210ENST00000550262 IRX6P78412 446 aaPredicted RBP9.32□□□□□ -0.92
ATP2A2-210ENST00000550262 AQRO60306 1485 aaKnown RBP eCLIP9.31□□□□□ -0.922e-7■■■■■ 29.4
ATP2A2-210ENST00000550262 BCORL1Q5H9F3 1711 aa9.31□□□□□ -0.92
ATP2A2-210ENST00000550262 CFTRP13569 1480 aa9.3□□□□□ -0.92
ATP2A2-210ENST00000550262 GAPVD1Q14C86 1478 aa9.29□□□□□ -0.92
ATP2A2-210ENST00000550262 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
ATP2A2-210ENST00000550262 SAMD9Q5K651 1589 aa9.28□□□□□ -0.92
ATP2A2-210ENST00000550262 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
ATP2A2-210ENST00000550262 SMG6Q86US8 1419 aaKnown RBP9.28□□□□□ -0.92
ATP2A2-210ENST00000550262 NEFLP07196 543 aa9.28□□□□□ -0.92
ATP2A2-210ENST00000550262 TULP1O00294 542 aaPredicted RBP9.27□□□□□ -0.92
ATP2A2-210ENST00000550262 AKNAQ7Z591 1439 aa9.27□□□□□ -0.93
ATP2A2-210ENST00000550262 DNMBPQ6XZF7 1577 aa9.27□□□□□ -0.93
ATP2A2-210ENST00000550262 CCDC144AA2RUR9 1427 aa9.27□□□□□ -0.93
ATP2A2-210ENST00000550262 INSRP06213 1382 aa9.27□□□□□ -0.93
ATP2A2-210ENST00000550262 LAMC1P11047 1609 aa9.27□□□□□ -0.93
ATP2A2-210ENST00000550262 CENPJQ9HC77 1338 aaPredicted RBP9.26□□□□□ -0.93
ATP2A2-210ENST00000550262 SIN3AQ96ST3 1273 aa9.26□□□□□ -0.93
ATP2A2-210ENST00000550262 NCOA1Q15788 1441 aa9.25□□□□□ -0.93
ATP2A2-210ENST00000550262 PAK3O75914 559 aaPredicted RBP9.25□□□□□ -0.93
ATP2A2-210ENST00000550262 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
ATP2A2-210ENST00000550262 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
ATP2A2-210ENST00000550262 KDM5CP41229 1560 aa9.25□□□□□ -0.93
ATP2A2-210ENST00000550262 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
ATP2A2-210ENST00000550262 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
ATP2A2-210ENST00000550262 TCOF1Q13428 1488 aaKnown RBP9.23□□□□□ -0.93
ATP2A2-210ENST00000550262 ARHGAP31Q2M1Z3 1444 aa9.23□□□□□ -0.93
ATP2A2-210ENST00000550262 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
ATP2A2-210ENST00000550262 RAB3GAP2Q9H2M9 1393 aa9.22□□□□□ -0.93
ATP2A2-210ENST00000550262 SNAPC4Q5SXM2 1469 aa9.21□□□□□ -0.93
ATP2A2-210ENST00000550262 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms