RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 WDR62O43379 1518 aa16■□□□□ 0.15
SMARCC2-208ENST00000550150 ERCC6Q03468 1493 aa16■□□□□ 0.15
SMARCC2-208ENST00000550150 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
SMARCC2-208ENST00000550150 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
SMARCC2-208ENST00000550150 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.145e-7■■■■■ 30.6
SMARCC2-208ENST00000550150 APLP2Q06481 763 aa15.9■□□□□ 0.14
SMARCC2-208ENST00000550150 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
SMARCC2-208ENST00000550150 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
SMARCC2-208ENST00000550150 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
SMARCC2-208ENST00000550150 MYT1Q01538 1121 aa15.85■□□□□ 0.13
SMARCC2-208ENST00000550150 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
SMARCC2-208ENST00000550150 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
SMARCC2-208ENST00000550150 CLIP1P30622 1438 aa15.81■□□□□ 0.12
SMARCC2-208ENST00000550150 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
SMARCC2-208ENST00000550150 CUL7Q14999 1698 aa15.8■□□□□ 0.12
SMARCC2-208ENST00000550150 VPS8Q8N3P4 1428 aa15.8■□□□□ 0.12
SMARCC2-208ENST00000550150 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
SMARCC2-208ENST00000550150 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
SMARCC2-208ENST00000550150 ITGAEP38570 1179 aa15.73■□□□□ 0.11
SMARCC2-208ENST00000550150 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.11
SMARCC2-208ENST00000550150 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
SMARCC2-208ENST00000550150 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
SMARCC2-208ENST00000550150 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
SMARCC2-208ENST00000550150 MAP3K1Q13233 1512 aa15.66■□□□□ 0.1
SMARCC2-208ENST00000550150 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
SMARCC2-208ENST00000550150 BCANQ96GW7 911 aa15.65■□□□□ 0.1
SMARCC2-208ENST00000550150 P3H3Q8IVL6 736 aa15.65■□□□□ 0.1
SMARCC2-208ENST00000550150 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
SMARCC2-208ENST00000550150 SUPT16HQ9Y5B9 1047 aaKnown RBP15.59■□□□□ 0.09
SMARCC2-208ENST00000550150 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
SMARCC2-208ENST00000550150 CEP170Q5SW79 1584 aa15.59■□□□□ 0.09
SMARCC2-208ENST00000550150 SAMD9Q5K651 1589 aa15.58■□□□□ 0.09
SMARCC2-208ENST00000550150 LRRIQ1Q96JM4 1722 aa15.56■□□□□ 0.08
SMARCC2-208ENST00000550150 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
SMARCC2-208ENST00000550150 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
SMARCC2-208ENST00000550150 SYNJ2O15056 1496 aa15.54■□□□□ 0.08
SMARCC2-208ENST00000550150 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
SMARCC2-208ENST00000550150 FBLN2P98095 1184 aa15.54■□□□□ 0.08
SMARCC2-208ENST00000550150 PCF11O94913 1555 aaKnown RBP15.54■□□□□ 0.08
SMARCC2-208ENST00000550150 IQGAP2Q13576 1575 aa15.53■□□□□ 0.08
SMARCC2-208ENST00000550150 KANK4Q5T7N3 995 aaPredicted RBP15.53■□□□□ 0.08
SMARCC2-208ENST00000550150 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
SMARCC2-208ENST00000550150 CHD1O14646 1710 aa15.52■□□□□ 0.07
SMARCC2-208ENST00000550150 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
SMARCC2-208ENST00000550150 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
SMARCC2-208ENST00000550150 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
SMARCC2-208ENST00000550150 NUP160Q12769 1436 aa15.45■□□□□ 0.06
SMARCC2-208ENST00000550150 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
SMARCC2-208ENST00000550150 HIRIP3Q9BW71 556 aaPredicted RBP15.44■□□□□ 0.06
SMARCC2-208ENST00000550150 UGGT2Q9NYU1 1516 aa15.43■□□□□ 0.06
SMARCC2-208ENST00000550150 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
SMARCC2-208ENST00000550150 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
SMARCC2-208ENST00000550150 DHX57Q6P158 1386 aaKnown RBP15.42■□□□□ 0.06
SMARCC2-208ENST00000550150 KIAA0556O60303 1618 aa15.41■□□□□ 0.06
SMARCC2-208ENST00000550150 FKBP8Q14318 412 aa15.41■□□□□ 0.06
SMARCC2-208ENST00000550150 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
SMARCC2-208ENST00000550150 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
SMARCC2-208ENST00000550150 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
SMARCC2-208ENST00000550150 LRRC9Q6ZRR7 1453 aa15.36■□□□□ 0.05
SMARCC2-208ENST00000550150 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
SMARCC2-208ENST00000550150 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
SMARCC2-208ENST00000550150 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
SMARCC2-208ENST00000550150 MAGI3Q5TCQ9 1506 aa15.34■□□□□ 0.05
SMARCC2-208ENST00000550150 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
SMARCC2-208ENST00000550150 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
SMARCC2-208ENST00000550150 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
SMARCC2-208ENST00000550150 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
SMARCC2-208ENST00000550150 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
SMARCC2-208ENST00000550150 ANP32EQ9BTT0 268 aa15.31■□□□□ 0.04
SMARCC2-208ENST00000550150 NEFLP07196 543 aa15.31■□□□□ 0.04
SMARCC2-208ENST00000550150 SIN3AQ96ST3 1273 aa15.3■□□□□ 0.04
SMARCC2-208ENST00000550150 PLB1Q6P1J6 1458 aa15.3■□□□□ 0.04
SMARCC2-208ENST00000550150 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
SMARCC2-208ENST00000550150 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
SMARCC2-208ENST00000550150 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
SMARCC2-208ENST00000550150 CLASP1Q7Z460 1538 aa15.26■□□□□ 0.03
SMARCC2-208ENST00000550150 NUP153P49790 1475 aaKnown RBP15.26■□□□□ 0.03
SMARCC2-208ENST00000550150 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
SMARCC2-208ENST00000550150 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
SMARCC2-208ENST00000550150 RAPGEF6Q8TEU7 1601 aa15.24■□□□□ 0.03
SMARCC2-208ENST00000550150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMARCC2-208ENST00000550150 HECW1Q76N89 1606 aa15.23■□□□□ 0.03
SMARCC2-208ENST00000550150 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.03
SMARCC2-208ENST00000550150 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.02
SMARCC2-208ENST00000550150 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
SMARCC2-208ENST00000550150 MAPKBP1O60336 1514 aa15.19■□□□□ 0.02
SMARCC2-208ENST00000550150 ABCA8O94911 1581 aa15.18■□□□□ 0.02
SMARCC2-208ENST00000550150 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
SMARCC2-208ENST00000550150 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
SMARCC2-208ENST00000550150 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
SMARCC2-208ENST00000550150 ANP32CO43423 234 aa15.16■□□□□ 0.02
SMARCC2-208ENST00000550150 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
SMARCC2-208ENST00000550150 NCOA2Q15596 1464 aa15.15■□□□□ 0.02
SMARCC2-208ENST00000550150 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
SMARCC2-208ENST00000550150 RBM19Q9Y4C8 960 aaKnown RBP15.14■□□□□ 0.01
SMARCC2-208ENST00000550150 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
SMARCC2-208ENST00000550150 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
SMARCC2-208ENST00000550150 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
SMARCC2-208ENST00000550150 KIF14Q15058 1648 aa15.12■□□□□ 0.01
SMARCC2-208ENST00000550150 PTPRGP23470 1445 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms