RNA–Protein interactions for RNA: ENST00000549287.1

TMEM106C-211, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-211ENST00000549287 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
TMEM106C-211ENST00000549287 ATXN8OSP0DMR3 200 aa11.25□□□□□ -0.61
TMEM106C-211ENST00000549287 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
TMEM106C-211ENST00000549287 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
TMEM106C-211ENST00000549287 MAP3K1Q13233 1512 aa11.21□□□□□ -0.61
TMEM106C-211ENST00000549287 RAPGEF2Q9Y4G8 1499 aa11.2□□□□□ -0.62
TMEM106C-211ENST00000549287 CFTRP13569 1480 aa11.19□□□□□ -0.62
TMEM106C-211ENST00000549287 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
TMEM106C-211ENST00000549287 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
TMEM106C-211ENST00000549287 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.62
TMEM106C-211ENST00000549287 CUX2O14529 1486 aa11.14□□□□□ -0.63
TMEM106C-211ENST00000549287 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
TMEM106C-211ENST00000549287 GTF3C3Q9Y5Q9 886 aa11.13□□□□□ -0.63
TMEM106C-211ENST00000549287 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
TMEM106C-211ENST00000549287 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
TMEM106C-211ENST00000549287 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
TMEM106C-211ENST00000549287 CUX1P39880 1505 aa11.09□□□□□ -0.63
TMEM106C-211ENST00000549287 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
TMEM106C-211ENST00000549287 TTBK1Q5TCY1 1321 aaPredicted RBP11.08□□□□□ -0.64
TMEM106C-211ENST00000549287 CCNB3Q8WWL7 1395 aa11.07□□□□□ -0.64
TMEM106C-211ENST00000549287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.07□□□□□ -0.64
TMEM106C-211ENST00000549287 CADPSQ9ULU8 1353 aa11.07□□□□□ -0.64
TMEM106C-211ENST00000549287 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
TMEM106C-211ENST00000549287 IGF1RP08069 1367 aa11.03□□□□□ -0.64
TMEM106C-211ENST00000549287 MIER1Q8N108 512 aa11.03□□□□□ -0.64
TMEM106C-211ENST00000549287 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
TMEM106C-211ENST00000549287 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.65
TMEM106C-211ENST00000549287 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
TMEM106C-211ENST00000549287 CAPN15O75808 1086 aa11□□□□□ -0.65
TMEM106C-211ENST00000549287 ZNF219Q9P2Y4 722 aaPredicted RBP11□□□□□ -0.65
TMEM106C-211ENST00000549287 AQRO60306 1485 aaKnown RBP eCLIP10.99□□□□□ -0.656e-6■■■■□ 25.1
TMEM106C-211ENST00000549287 EFCAB5A4FU69 1503 aa10.98□□□□□ -0.65
TMEM106C-211ENST00000549287 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
TMEM106C-211ENST00000549287 SETD5Q9C0A6 1442 aa10.97□□□□□ -0.65
TMEM106C-211ENST00000549287 TIAM1Q13009 1591 aa10.96□□□□□ -0.65
TMEM106C-211ENST00000549287 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
TMEM106C-211ENST00000549287 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
TMEM106C-211ENST00000549287 CC2D2AQ9P2K1 1620 aa10.94□□□□□ -0.66
TMEM106C-211ENST00000549287 CUL7Q14999 1698 aa10.92□□□□□ -0.66
TMEM106C-211ENST00000549287 RANGAP1P46060 587 aaPredicted RBP10.92□□□□□ -0.66
TMEM106C-211ENST00000549287 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
TMEM106C-211ENST00000549287 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
TMEM106C-211ENST00000549287 FGD5Q6ZNL6 1462 aa10.91□□□□□ -0.66
TMEM106C-211ENST00000549287 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
TMEM106C-211ENST00000549287 CASKIN1Q8WXD9 1431 aa10.9□□□□□ -0.66
TMEM106C-211ENST00000549287 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.67
TMEM106C-211ENST00000549287 RAB3GAP2Q9H2M9 1393 aa10.89□□□□□ -0.67
TMEM106C-211ENST00000549287 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
TMEM106C-211ENST00000549287 CCER2I3L3R5 266 aa10.87□□□□□ -0.67
TMEM106C-211ENST00000549287 POLA2Q14181 598 aa10.87□□□□□ -0.67
TMEM106C-211ENST00000549287 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
TMEM106C-211ENST00000549287 CFAP43Q8NDM7 1665 aa10.87□□□□□ -0.67
TMEM106C-211ENST00000549287 CACNB1Q02641 598 aaPredicted RBP10.86□□□□□ -0.67
TMEM106C-211ENST00000549287 ABCB7O75027 752 aa10.85□□□□□ -0.67
TMEM106C-211ENST00000549287 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
TMEM106C-211ENST00000549287 LAMC3Q9Y6N6 1575 aa10.83□□□□□ -0.68
TMEM106C-211ENST00000549287 PPP1R15AO75807 674 aaPredicted RBP10.82□□□□□ -0.68
TMEM106C-211ENST00000549287 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
TMEM106C-211ENST00000549287 CTTNBP2Q8WZ74 1663 aa10.8□□□□□ -0.68
TMEM106C-211ENST00000549287 DSG3P32926 999 aa10.8□□□□□ -0.68
TMEM106C-211ENST00000549287 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
TMEM106C-211ENST00000549287 ANP32CO43423 234 aa10.79□□□□□ -0.68
TMEM106C-211ENST00000549287 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
TMEM106C-211ENST00000549287 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
TMEM106C-211ENST00000549287 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
TMEM106C-211ENST00000549287 KIF21AQ7Z4S6 1674 aa10.77□□□□□ -0.69
TMEM106C-211ENST00000549287 POLA1P09884 1462 aaPredicted RBP10.77□□□□□ -0.69
TMEM106C-211ENST00000549287 MTUS2Q5JR59 1369 aa10.77□□□□□ -0.69
TMEM106C-211ENST00000549287 UACAQ9BZF9 1416 aa10.76□□□□□ -0.69
TMEM106C-211ENST00000549287 CCDC18Q5T9S5 1454 aa10.76□□□□□ -0.69
TMEM106C-211ENST00000549287 ITGAEP38570 1179 aa10.76□□□□□ -0.69
TMEM106C-211ENST00000549287 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
TMEM106C-211ENST00000549287 HFM1A2PYH4 1435 aa10.75□□□□□ -0.69
TMEM106C-211ENST00000549287 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
TMEM106C-211ENST00000549287 NEFLP07196 543 aa10.75□□□□□ -0.69
TMEM106C-211ENST00000549287 ERICH6BQ5W0A0 696 aa10.75□□□□□ -0.69
TMEM106C-211ENST00000549287 TONSLQ96HA7 1378 aa10.75□□□□□ -0.69
TMEM106C-211ENST00000549287 AKNAQ7Z591 1439 aa10.75□□□□□ -0.69
TMEM106C-211ENST00000549287 PCF11O94913 1555 aaKnown RBP10.74□□□□□ -0.69
TMEM106C-211ENST00000549287 FKBP8Q14318 412 aa10.74□□□□□ -0.69
TMEM106C-211ENST00000549287 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
TMEM106C-211ENST00000549287 ATP1B4Q9UN42 357 aaPredicted RBP10.72□□□□□ -0.69
TMEM106C-211ENST00000549287 MIA2Q96PC5 1412 aa10.72□□□□□ -0.69
TMEM106C-211ENST00000549287 EHBP1L1Q8N3D4 1523 aa10.72□□□□□ -0.69
TMEM106C-211ENST00000549287 SAMD9Q5K651 1589 aa10.72□□□□□ -0.69
TMEM106C-211ENST00000549287 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
TMEM106C-211ENST00000549287 GAPVD1Q14C86 1478 aa10.71□□□□□ -0.69
TMEM106C-211ENST00000549287 MYOM3Q5VTT5 1437 aa10.71□□□□□ -0.69
TMEM106C-211ENST00000549287 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
TMEM106C-211ENST00000549287 FHOD3Q2V2M9 1422 aa10.69□□□□□ -0.7
TMEM106C-211ENST00000549287 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
TMEM106C-211ENST00000549287 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
TMEM106C-211ENST00000549287 DDX10Q13206 875 aaKnown RBP10.68□□□□□ -0.7
TMEM106C-211ENST00000549287 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
TMEM106C-211ENST00000549287 TCOF1Q13428 1488 aaKnown RBP10.68□□□□□ -0.7
TMEM106C-211ENST00000549287 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
TMEM106C-211ENST00000549287 CDK11AQ9UQ88 783 aaPredicted RBP10.67□□□□□ -0.7
TMEM106C-211ENST00000549287 P3H3Q8IVL6 736 aa10.66□□□□□ -0.7
TMEM106C-211ENST00000549287 SIN3AQ96ST3 1273 aa10.66□□□□□ -0.7
TMEM106C-211ENST00000549287 FBLN2P98095 1184 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms