RNA–Protein interactions for RNA: ENST00000548882.5

MMP19-207, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-207ENST00000548882 KIF21BO75037 1637 aa12.69□□□□□ -0.38
MMP19-207ENST00000548882 RRP7BPQ9NSQ0 103 aa12.68□□□□□ -0.38
MMP19-207ENST00000548882 FAM9BQ8IZU0 186 aa12.67□□□□□ -0.38
MMP19-207ENST00000548882 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
MMP19-207ENST00000548882 EIF4G2P78344 907 aaKnown RBP eCLIP12.66□□□□□ -0.38
MMP19-207ENST00000548882 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
MMP19-207ENST00000548882 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
MMP19-207ENST00000548882 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
MMP19-207ENST00000548882 IRX6P78412 446 aaPredicted RBP12.62□□□□□ -0.39
MMP19-207ENST00000548882 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
MMP19-207ENST00000548882 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
MMP19-207ENST00000548882 MRS2Q9HD23 443 aa12.62□□□□□ -0.39
MMP19-207ENST00000548882 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
MMP19-207ENST00000548882 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
MMP19-207ENST00000548882 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
MMP19-207ENST00000548882 FBLN2P98095 1184 aa12.58□□□□□ -0.4
MMP19-207ENST00000548882 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
MMP19-207ENST00000548882 IGF1RP08069 1367 aa12.57□□□□□ -0.4
MMP19-207ENST00000548882 CADPSQ9ULU8 1353 aa12.57□□□□□ -0.4
MMP19-207ENST00000548882 EIF4G1Q04637 1599 aaKnown RBP12.57□□□□□ -0.4
MMP19-207ENST00000548882 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
MMP19-207ENST00000548882 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
MMP19-207ENST00000548882 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
MMP19-207ENST00000548882 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
MMP19-207ENST00000548882 ERICH3Q5RHP9 1530 aa12.55□□□□□ -0.4
MMP19-207ENST00000548882 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
MMP19-207ENST00000548882 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
MMP19-207ENST00000548882 FHOD3Q2V2M9 1422 aa12.52□□□□□ -0.41
MMP19-207ENST00000548882 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
MMP19-207ENST00000548882 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
MMP19-207ENST00000548882 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
MMP19-207ENST00000548882 RBM19Q9Y4C8 960 aaKnown RBP12.51□□□□□ -0.41
MMP19-207ENST00000548882 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
MMP19-207ENST00000548882 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
MMP19-207ENST00000548882 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
MMP19-207ENST00000548882 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
MMP19-207ENST00000548882 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
MMP19-207ENST00000548882 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
MMP19-207ENST00000548882 BICRAQ9NZM4 1560 aa12.47□□□□□ -0.41
MMP19-207ENST00000548882 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
MMP19-207ENST00000548882 LRRC9Q6ZRR7 1453 aa12.45□□□□□ -0.42
MMP19-207ENST00000548882 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
MMP19-207ENST00000548882 CFTRP13569 1480 aa12.44□□□□□ -0.42
MMP19-207ENST00000548882 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
MMP19-207ENST00000548882 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
MMP19-207ENST00000548882 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
MMP19-207ENST00000548882 CUX1P39880 1505 aa12.43□□□□□ -0.42
MMP19-207ENST00000548882 MPHOSPH9Q99550 1183 aa12.43□□□□□ -0.42
MMP19-207ENST00000548882 CFDP1Q9UEE9 299 aaPredicted RBP12.42□□□□□ -0.42
MMP19-207ENST00000548882 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
MMP19-207ENST00000548882 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
MMP19-207ENST00000548882 FOXD1Q16676 465 aa12.41□□□□□ -0.42
MMP19-207ENST00000548882 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
MMP19-207ENST00000548882 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
MMP19-207ENST00000548882 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
MMP19-207ENST00000548882 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
MMP19-207ENST00000548882 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
MMP19-207ENST00000548882 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
MMP19-207ENST00000548882 CCDC18Q5T9S5 1454 aa12.37□□□□□ -0.43
MMP19-207ENST00000548882 SENP3-EIF4A1A0A087X0R7 540 aa12.37□□□□□ -0.43
MMP19-207ENST00000548882 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
MMP19-207ENST00000548882 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
MMP19-207ENST00000548882 FGD6Q6ZV73 1430 aa12.36□□□□□ -0.43
MMP19-207ENST00000548882 NBR1Q14596 966 aa12.35□□□□□ -0.43
MMP19-207ENST00000548882 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
MMP19-207ENST00000548882 HMGXB3Q12766 1538 aa12.34□□□□□ -0.43
MMP19-207ENST00000548882 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
MMP19-207ENST00000548882 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
MMP19-207ENST00000548882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
MMP19-207ENST00000548882 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
MMP19-207ENST00000548882 TIAM1Q13009 1591 aa12.33□□□□□ -0.44
MMP19-207ENST00000548882 PDS5BQ9NTI5 1447 aa12.31□□□□□ -0.44
MMP19-207ENST00000548882 PRKRIP1Q9H875 184 aaPredicted RBP12.3□□□□□ -0.44
MMP19-207ENST00000548882 WDR97A6NE52 1622 aa12.3□□□□□ -0.44
MMP19-207ENST00000548882 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
MMP19-207ENST00000548882 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
MMP19-207ENST00000548882 PKD2Q13563 968 aa12.29□□□□□ -0.44
MMP19-207ENST00000548882 MYOM3Q5VTT5 1437 aa12.28□□□□□ -0.44
MMP19-207ENST00000548882 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
MMP19-207ENST00000548882 MAP3K1Q13233 1512 aa12.27□□□□□ -0.45
MMP19-207ENST00000548882 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
MMP19-207ENST00000548882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
MMP19-207ENST00000548882 WASHC2AQ641Q2 1341 aa12.26□□□□□ -0.45
MMP19-207ENST00000548882 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
MMP19-207ENST00000548882 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
MMP19-207ENST00000548882 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
MMP19-207ENST00000548882 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
MMP19-207ENST00000548882 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
MMP19-207ENST00000548882 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
MMP19-207ENST00000548882 GAPVD1Q14C86 1478 aa12.23□□□□□ -0.45
MMP19-207ENST00000548882 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
MMP19-207ENST00000548882 ZBED9Q6R2W3 1325 aa12.22□□□□□ -0.45
MMP19-207ENST00000548882 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
MMP19-207ENST00000548882 NUDCQ9Y266 331 aa12.22□□□□□ -0.45
MMP19-207ENST00000548882 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
MMP19-207ENST00000548882 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.45
MMP19-207ENST00000548882 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
MMP19-207ENST00000548882 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
MMP19-207ENST00000548882 NUP155O75694 1391 aa12.19□□□□□ -0.46
MMP19-207ENST00000548882 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms