RNA–Protein interactions for RNA: ENST00000548882.5

MMP19-207, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-207ENST00000548882 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
MMP19-207ENST00000548882 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
MMP19-207ENST00000548882 SUPT5HO00267 1087 aaKnown RBP15.65■□□□□ 0.1
MMP19-207ENST00000548882 SHROOM4Q9ULL8 1493 aa15.61■□□□□ 0.09
MMP19-207ENST00000548882 PCGF6Q9BYE7 350 aa14.9□□□□□ -0.02
MMP19-207ENST00000548882 CHIC1Q5VXU3 224 aa14.77□□□□□ -0.05
MMP19-207ENST00000548882 HRCP23327 699 aa14.67□□□□□ -0.06
MMP19-207ENST00000548882 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
MMP19-207ENST00000548882 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
MMP19-207ENST00000548882 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
MMP19-207ENST00000548882 LOC105371045A0A1W2PR82 267 aa14.51□□□□□ -0.09
MMP19-207ENST00000548882 ZCCHC6Q5VYS8 1495 aaKnown RBP14.44□□□□□ -0.1
MMP19-207ENST00000548882 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
MMP19-207ENST00000548882 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
MMP19-207ENST00000548882 PPARGC1BQ86YN6 1023 aaKnown RBP14.35□□□□□ -0.11
MMP19-207ENST00000548882 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.14
MMP19-207ENST00000548882 CCER1Q8TC90 406 aaPredicted RBP14.18□□□□□ -0.14
MMP19-207ENST00000548882 TTBK1Q5TCY1 1321 aaPredicted RBP14.17□□□□□ -0.14
MMP19-207ENST00000548882 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
MMP19-207ENST00000548882 DCAF1Q9Y4B6 1507 aa14.07□□□□□ -0.16
MMP19-207ENST00000548882 APLP2Q06481 763 aa14.06□□□□□ -0.16
MMP19-207ENST00000548882 UBTFP17480 764 aaKnown RBP14.02□□□□□ -0.16
MMP19-207ENST00000548882 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
MMP19-207ENST00000548882 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
MMP19-207ENST00000548882 ABCC9O60706 1549 aa13.93□□□□□ -0.18
MMP19-207ENST00000548882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
MMP19-207ENST00000548882 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
MMP19-207ENST00000548882 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
MMP19-207ENST00000548882 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
MMP19-207ENST00000548882 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
MMP19-207ENST00000548882 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
MMP19-207ENST00000548882 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.22
MMP19-207ENST00000548882 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
MMP19-207ENST00000548882 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
MMP19-207ENST00000548882 ACIN1Q9UKV3 1341 aaKnown RBP13.58□□□□□ -0.24
MMP19-207ENST00000548882 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
MMP19-207ENST00000548882 RB1CC1Q8TDY2 1594 aa13.56□□□□□ -0.24
MMP19-207ENST00000548882 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
MMP19-207ENST00000548882 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
MMP19-207ENST00000548882 MYT1Q01538 1121 aa13.5□□□□□ -0.25
MMP19-207ENST00000548882 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
MMP19-207ENST00000548882 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
MMP19-207ENST00000548882 NACADO15069 1562 aa13.47□□□□□ -0.25
MMP19-207ENST00000548882 ITGAEP38570 1179 aa13.46□□□□□ -0.25
MMP19-207ENST00000548882 NEUROD1Q13562 356 aa13.44□□□□□ -0.26
MMP19-207ENST00000548882 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
MMP19-207ENST00000548882 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
MMP19-207ENST00000548882 EEA1Q15075 1411 aa13.34□□□□□ -0.27
MMP19-207ENST00000548882 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
MMP19-207ENST00000548882 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
MMP19-207ENST00000548882 NEFLP07196 543 aa13.31□□□□□ -0.28
MMP19-207ENST00000548882 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
MMP19-207ENST00000548882 CLIP1P30622 1438 aa13.25□□□□□ -0.29
MMP19-207ENST00000548882 SOGA1O94964 1423 aa13.25□□□□□ -0.29
MMP19-207ENST00000548882 MIER1Q8N108 512 aa13.24□□□□□ -0.29
MMP19-207ENST00000548882 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
MMP19-207ENST00000548882 WIZO95785 1651 aa13.22□□□□□ -0.29
MMP19-207ENST00000548882 CCDC88BA6NC98 1476 aa13.21□□□□□ -0.29
MMP19-207ENST00000548882 FAM50AQ14320 339 aaKnown RBP13.21□□□□□ -0.29
MMP19-207ENST00000548882 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
MMP19-207ENST00000548882 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
MMP19-207ENST00000548882 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
MMP19-207ENST00000548882 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
MMP19-207ENST00000548882 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
MMP19-207ENST00000548882 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
MMP19-207ENST00000548882 ANP32CO43423 234 aa13.04□□□□□ -0.32
MMP19-207ENST00000548882 BCANQ96GW7 911 aa13.04□□□□□ -0.32
MMP19-207ENST00000548882 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
MMP19-207ENST00000548882 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.32
MMP19-207ENST00000548882 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
MMP19-207ENST00000548882 DDX10Q13206 875 aaKnown RBP12.99□□□□□ -0.33
MMP19-207ENST00000548882 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
MMP19-207ENST00000548882 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
MMP19-207ENST00000548882 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
MMP19-207ENST00000548882 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
MMP19-207ENST00000548882 FKBP8Q14318 412 aa12.92□□□□□ -0.34
MMP19-207ENST00000548882 KANK4Q5T7N3 995 aaPredicted RBP12.91□□□□□ -0.34
MMP19-207ENST00000548882 POLR3GLQ9BT43 218 aa12.9□□□□□ -0.34
MMP19-207ENST00000548882 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
MMP19-207ENST00000548882 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
MMP19-207ENST00000548882 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
MMP19-207ENST00000548882 CNGB1Q14028 1251 aaPredicted RBP12.87□□□□□ -0.35
MMP19-207ENST00000548882 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
MMP19-207ENST00000548882 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
MMP19-207ENST00000548882 SUPT16HQ9Y5B9 1047 aaKnown RBP12.82□□□□□ -0.36
MMP19-207ENST00000548882 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
MMP19-207ENST00000548882 CDK11AQ9UQ88 783 aaPredicted RBP12.81□□□□□ -0.36
MMP19-207ENST00000548882 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
MMP19-207ENST00000548882 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
MMP19-207ENST00000548882 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
MMP19-207ENST00000548882 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
MMP19-207ENST00000548882 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
MMP19-207ENST00000548882 ARID3CA6NKF2 412 aa12.75□□□□□ -0.37
MMP19-207ENST00000548882 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
MMP19-207ENST00000548882 CHIC2Q9UKJ5 165 aa12.74□□□□□ -0.37
MMP19-207ENST00000548882 CUX2O14529 1486 aa12.74□□□□□ -0.37
MMP19-207ENST00000548882 RAB3GAP2Q9H2M9 1393 aa12.73□□□□□ -0.37
MMP19-207ENST00000548882 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
MMP19-207ENST00000548882 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
MMP19-207ENST00000548882 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms