RNA–Protein interactions for RNA: ENST00000548599.5

CNOT2-212, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-212ENST00000548599 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
CNOT2-212ENST00000548599 KIF13AQ9H1H9 1805 aa14.11□□□□□ -0.15
CNOT2-212ENST00000548599 PEG3Q9GZU2 1588 aa14.09□□□□□ -0.15
CNOT2-212ENST00000548599 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
CNOT2-212ENST00000548599 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
CNOT2-212ENST00000548599 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
CNOT2-212ENST00000548599 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
CNOT2-212ENST00000548599 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
CNOT2-212ENST00000548599 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
CNOT2-212ENST00000548599 POTEHQ6S545 545 aa13.99□□□□□ -0.17
CNOT2-212ENST00000548599 FBLN2P98095 1184 aa13.97□□□□□ -0.17
CNOT2-212ENST00000548599 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
CNOT2-212ENST00000548599 TPRNQ4KMQ1 711 aa13.95□□□□□ -0.18
CNOT2-212ENST00000548599 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
CNOT2-212ENST00000548599 ADGRL1O94910 1474 aa13.93□□□□□ -0.18
CNOT2-212ENST00000548599 KDM6BO15054 1643 aa13.9□□□□□ -0.19
CNOT2-212ENST00000548599 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT2-212ENST00000548599 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.19
CNOT2-212ENST00000548599 CFTRP13569 1480 aa13.82□□□□□ -0.2
CNOT2-212ENST00000548599 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
CNOT2-212ENST00000548599 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
CNOT2-212ENST00000548599 CAPN15O75808 1086 aa13.76□□□□□ -0.21
CNOT2-212ENST00000548599 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
CNOT2-212ENST00000548599 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
CNOT2-212ENST00000548599 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
CNOT2-212ENST00000548599 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
CNOT2-212ENST00000548599 DSG3P32926 999 aa13.71□□□□□ -0.21
CNOT2-212ENST00000548599 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
CNOT2-212ENST00000548599 ABCC10Q5T3U5 1492 aa13.71□□□□□ -0.21
CNOT2-212ENST00000548599 TSPOAP1O95153 1857 aa13.71□□□□□ -0.21
CNOT2-212ENST00000548599 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
CNOT2-212ENST00000548599 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
CNOT2-212ENST00000548599 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
CNOT2-212ENST00000548599 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
CNOT2-212ENST00000548599 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
CNOT2-212ENST00000548599 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
CNOT2-212ENST00000548599 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
CNOT2-212ENST00000548599 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
CNOT2-212ENST00000548599 ARXQ96QS3 562 aa13.63□□□□□ -0.23
CNOT2-212ENST00000548599 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
CNOT2-212ENST00000548599 TULP1O00294 542 aaPredicted RBP13.59□□□□□ -0.23
CNOT2-212ENST00000548599 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
CNOT2-212ENST00000548599 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
CNOT2-212ENST00000548599 PKD2Q13563 968 aa13.55□□□□□ -0.24
CNOT2-212ENST00000548599 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
CNOT2-212ENST00000548599 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CNOT2-212ENST00000548599 WIZO95785 1651 aa13.53□□□□□ -0.24
CNOT2-212ENST00000548599 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
CNOT2-212ENST00000548599 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
CNOT2-212ENST00000548599 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
CNOT2-212ENST00000548599 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
CNOT2-212ENST00000548599 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
CNOT2-212ENST00000548599 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
CNOT2-212ENST00000548599 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
CNOT2-212ENST00000548599 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
CNOT2-212ENST00000548599 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
CNOT2-212ENST00000548599 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
CNOT2-212ENST00000548599 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
CNOT2-212ENST00000548599 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
CNOT2-212ENST00000548599 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
CNOT2-212ENST00000548599 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
CNOT2-212ENST00000548599 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
CNOT2-212ENST00000548599 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
CNOT2-212ENST00000548599 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
CNOT2-212ENST00000548599 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
CNOT2-212ENST00000548599 PROM2Q8N271 834 aa13.4□□□□□ -0.26
CNOT2-212ENST00000548599 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
CNOT2-212ENST00000548599 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
CNOT2-212ENST00000548599 ABCB7O75027 752 aa13.38□□□□□ -0.27
CNOT2-212ENST00000548599 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
CNOT2-212ENST00000548599 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNOT2-212ENST00000548599 APLP2Q06481 763 aa13.36□□□□□ -0.27
CNOT2-212ENST00000548599 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
CNOT2-212ENST00000548599 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
CNOT2-212ENST00000548599 SOGA1O94964 1423 aa13.35□□□□□ -0.27
CNOT2-212ENST00000548599 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
CNOT2-212ENST00000548599 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
CNOT2-212ENST00000548599 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
CNOT2-212ENST00000548599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
CNOT2-212ENST00000548599 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
CNOT2-212ENST00000548599 PTPRMP28827 1452 aa13.29□□□□□ -0.28
CNOT2-212ENST00000548599 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
CNOT2-212ENST00000548599 NUP160Q12769 1436 aa13.27□□□□□ -0.29
CNOT2-212ENST00000548599 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
CNOT2-212ENST00000548599 KIF21BO75037 1637 aa13.25□□□□□ -0.29
CNOT2-212ENST00000548599 NBR1Q14596 966 aa13.25□□□□□ -0.29
CNOT2-212ENST00000548599 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
CNOT2-212ENST00000548599 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
CNOT2-212ENST00000548599 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
CNOT2-212ENST00000548599 HSPA2P54652 639 aa13.22□□□□□ -0.29
CNOT2-212ENST00000548599 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
CNOT2-212ENST00000548599 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
CNOT2-212ENST00000548599 GLI2P10070 1586 aa13.2□□□□□ -0.3
CNOT2-212ENST00000548599 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
CNOT2-212ENST00000548599 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
CNOT2-212ENST00000548599 TMEM132AQ24JP5 1023 aa13.18□□□□□ -0.3
CNOT2-212ENST00000548599 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
CNOT2-212ENST00000548599 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
CNOT2-212ENST00000548599 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
CNOT2-212ENST00000548599 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms