RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, human

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-208	ENST00000547061	POTEH	Q6S545	545 aa		12.1	□□□□□ -0.47
RACGAP1-208	ENST00000547061	PROM2	Q8N271	834 aa		12.05	□□□□□ -0.48
RACGAP1-208	ENST00000547061	RSF1	Q96T23	1441 aa	Predicted RBP	12.04	□□□□□ -0.48
RACGAP1-208	ENST00000547061	PIP4P2	Q8N4L2	257 aa		12.04	□□□□□ -0.48
RACGAP1-208	ENST00000547061	NES	P48681	1621 aa		12.03	□□□□□ -0.48
RACGAP1-208	ENST00000547061	FXR2	P51116	673 aa	Known RBP eCLIP	12.02	□□□□□ -0.49	2e-7	■□□□□ 9.2
RACGAP1-208	ENST00000547061	PRKAR2A	P13861	404 aa	Known RBP	11.99	□□□□□ -0.49
RACGAP1-208	ENST00000547061	CFTR	P13569	1480 aa		11.98	□□□□□ -0.49
RACGAP1-208	ENST00000547061	PLEKHG5	O94827	1062 aa		11.97	□□□□□ -0.49
RACGAP1-208	ENST00000547061	FBXO3	Q9UK99	471 aa		11.97	□□□□□ -0.49
RACGAP1-208	ENST00000547061	THOC2	Q8NI27	1593 aa	Known RBP	11.93	□□□□□ -0.5
RACGAP1-208	ENST00000547061	TOP2A	P11388	1531 aa	Known RBP	11.93	□□□□□ -0.5
RACGAP1-208	ENST00000547061	WIZ	O95785	1651 aa		11.93	□□□□□ -0.5
RACGAP1-208	ENST00000547061	MRC2	Q9UBG0	1479 aa		11.91	□□□□□ -0.5
RACGAP1-208	ENST00000547061	CHADL	Q6NUI6	762 aa		11.9	□□□□□ -0.5
RACGAP1-208	ENST00000547061	WDR62	O43379	1518 aa		11.89	□□□□□ -0.51
RACGAP1-208	ENST00000547061	FANCD2	Q9BXW9	1451 aa		11.87	□□□□□ -0.51
RACGAP1-208	ENST00000547061	CEP164	Q9UPV0	1460 aa		11.86	□□□□□ -0.51
RACGAP1-208	ENST00000547061	PLCD3	Q8N3E9	789 aa		11.85	□□□□□ -0.51
RACGAP1-208	ENST00000547061	MIER1	Q8N108	512 aa		11.84	□□□□□ -0.51
RACGAP1-208	ENST00000547061	HAX1	O00165	279 aa		11.81	□□□□□ -0.52
RACGAP1-208	ENST00000547061	CREBZF	Q9NS37	354 aa		11.81	□□□□□ -0.52
RACGAP1-208	ENST00000547061	CCDC88B	A6NC98	1476 aa		11.8	□□□□□ -0.52
RACGAP1-208	ENST00000547061	KIF21A	Q7Z4S6	1674 aa		11.8	□□□□□ -0.52
RACGAP1-208	ENST00000547061	NPM1	P06748	294 aa	Known RBP eCLIP	11.79	□□□□□ -0.52
RACGAP1-208	ENST00000547061	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.79	□□□□□ -0.52
RACGAP1-208	ENST00000547061	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.79	□□□□□ -0.52
RACGAP1-208	ENST00000547061	ABCC8	Q09428	1581 aa		11.79	□□□□□ -0.52
RACGAP1-208	ENST00000547061	URB2	Q14146	1524 aa	Known RBP	11.72	□□□□□ -0.53
RACGAP1-208	ENST00000547061	PAK3	O75914	559 aa	Predicted RBP	11.71	□□□□□ -0.53
RACGAP1-208	ENST00000547061	VASP	P50552	380 aa	Predicted RBP	11.71	□□□□□ -0.53
RACGAP1-208	ENST00000547061	IFT140	Q96RY7	1462 aa		11.7	□□□□□ -0.54
RACGAP1-208	ENST00000547061	CD44	P16070	742 aa	Known RBP	11.66	□□□□□ -0.54
RACGAP1-208	ENST00000547061	KLHL34	Q8N239	644 aa		11.66	□□□□□ -0.54
RACGAP1-208	ENST00000547061	PRDM2	Q13029	1718 aa		11.64	□□□□□ -0.55
RACGAP1-208	ENST00000547061	TOPBP1	Q92547	1522 aa		11.64	□□□□□ -0.55
RACGAP1-208	ENST00000547061	C19orf67	A6NJJ6	358 aa		11.63	□□□□□ -0.55
RACGAP1-208	ENST00000547061	DNMBP	Q6XZF7	1577 aa		11.6	□□□□□ -0.55
RACGAP1-208	ENST00000547061	MNX1	P50219	401 aa	Predicted RBP	11.6	□□□□□ -0.55
RACGAP1-208	ENST00000547061	SP7	Q8TDD2	431 aa	Predicted RBP	11.56	□□□□□ -0.56
RACGAP1-208	ENST00000547061	ZRANB1	Q9UGI0	708 aa		11.56	□□□□□ -0.56
RACGAP1-208	ENST00000547061	WDR97	A6NE52	1622 aa		11.56	□□□□□ -0.56
RACGAP1-208	ENST00000547061	POLA1	P09884	1462 aa	Predicted RBP	11.53	□□□□□ -0.56
RACGAP1-208	ENST00000547061	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.53	□□□□□ -0.56
RACGAP1-208	ENST00000547061	FAM212A	Q96EL1	285 aa		11.52	□□□□□ -0.57
RACGAP1-208	ENST00000547061	SOGA1	O94964	1423 aa		11.52	□□□□□ -0.57
RACGAP1-208	ENST00000547061	TARBP1	Q13395	1621 aa	Known RBP	11.51	□□□□□ -0.57
RACGAP1-208	ENST00000547061	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.51	□□□□□ -0.57
RACGAP1-208	ENST00000547061	CLCN6	P51797	869 aa		11.48	□□□□□ -0.57
RACGAP1-208	ENST00000547061	SPOCK2	Q92563	424 aa		11.47	□□□□□ -0.57
RACGAP1-208	ENST00000547061	AQR	O60306	1485 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	1e-6	■■■□□ 15.3
RACGAP1-208	ENST00000547061	EVX2	Q03828	476 aa		11.46	□□□□□ -0.57
RACGAP1-208	ENST00000547061	ZNF579	Q8NAF0	562 aa	Known RBP	11.46	□□□□□ -0.57
RACGAP1-208	ENST00000547061	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.44	□□□□□ -0.58
RACGAP1-208	ENST00000547061	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.44	□□□□□ -0.58
RACGAP1-208	ENST00000547061	RASEF	Q8IZ41	740 aa		11.44	□□□□□ -0.58
RACGAP1-208	ENST00000547061	FGD5	Q6ZNL6	1462 aa		11.44	□□□□□ -0.58
RACGAP1-208	ENST00000547061	EIF4G3	O43432	1585 aa	Known RBP	11.43	□□□□□ -0.58
RACGAP1-208	ENST00000547061	DCAF8	Q5TAQ9	597 aa		11.43	□□□□□ -0.58
RACGAP1-208	ENST00000547061	CUX1	P39880	1505 aa		11.43	□□□□□ -0.58
RACGAP1-208	ENST00000547061	GRIN2B	Q13224	1484 aa		11.43	□□□□□ -0.58
RACGAP1-208	ENST00000547061	NUBP1	P53384	320 aa		11.42	□□□□□ -0.58
RACGAP1-208	ENST00000547061	TDRD9	Q8NDG6	1382 aa	Known RBP	11.41	□□□□□ -0.58
RACGAP1-208	ENST00000547061	ABCA10	Q8WWZ4	1543 aa		11.41	□□□□□ -0.58
RACGAP1-208	ENST00000547061	RAD54L2	Q9Y4B4	1467 aa		11.41	□□□□□ -0.58
RACGAP1-208	ENST00000547061	GSE1	Q14687	1217 aa		11.41	□□□□□ -0.58
RACGAP1-208	ENST00000547061	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.41	□□□□□ -0.58
RACGAP1-208	ENST00000547061	SUPT5H	O00267	1087 aa	Known RBP	11.4	□□□□□ -0.58
RACGAP1-208	ENST00000547061	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.38	□□□□□ -0.59
RACGAP1-208	ENST00000547061	PHF12	Q96QT6	1004 aa		11.38	□□□□□ -0.59
RACGAP1-208	ENST00000547061	SYNJ2	O15056	1496 aa		11.38	□□□□□ -0.59
RACGAP1-208	ENST00000547061	ARHGEF11	O15085	1522 aa		11.37	□□□□□ -0.59
RACGAP1-208	ENST00000547061	TRIM41	Q8WV44	630 aa		11.37	□□□□□ -0.59
RACGAP1-208	ENST00000547061	GAPVD1	Q14C86	1478 aa		11.37	□□□□□ -0.59
RACGAP1-208	ENST00000547061	GABBR2	O75899	941 aa		11.36	□□□□□ -0.59
RACGAP1-208	ENST00000547061	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.36	□□□□□ -0.59
RACGAP1-208	ENST00000547061	CCDC61	Q9Y6R9	512 aa		11.35	□□□□□ -0.59
RACGAP1-208	ENST00000547061	SNAPC4	Q5SXM2	1469 aa		11.33	□□□□□ -0.6
RACGAP1-208	ENST00000547061	RIMBP3C	A6NJZ7	1639 aa		11.31	□□□□□ -0.6
RACGAP1-208	ENST00000547061	RIMBP3B	A6NNM3	1639 aa		11.31	□□□□□ -0.6
RACGAP1-208	ENST00000547061	TOP2B	Q02880	1626 aa		11.31	□□□□□ -0.6
RACGAP1-208	ENST00000547061	RIMBP3	Q9UFD9	1639 aa		11.31	□□□□□ -0.6
RACGAP1-208	ENST00000547061	CLASP1	Q7Z460	1538 aa		11.3	□□□□□ -0.6
RACGAP1-208	ENST00000547061	SYNJ1	O43426	1573 aa		11.3	□□□□□ -0.6
RACGAP1-208	ENST00000547061	ABCA5	Q8WWZ7	1642 aa		11.29	□□□□□ -0.6
RACGAP1-208	ENST00000547061	DCBLD2	Q96PD2	775 aa		11.29	□□□□□ -0.6
RACGAP1-208	ENST00000547061	FHAD1	B1AJZ9	1412 aa		11.28	□□□□□ -0.6
RACGAP1-208	ENST00000547061	CYB5RL	Q6IPT4	315 aa		11.28	□□□□□ -0.6
RACGAP1-208	ENST00000547061	ERICH3	Q5RHP9	1530 aa		11.28	□□□□□ -0.6
RACGAP1-208	ENST00000547061	BIVM-ERCC5	R4GMW8	1640 aa		11.27	□□□□□ -0.6
RACGAP1-208	ENST00000547061	NUP160	Q12769	1436 aa		11.26	□□□□□ -0.61
RACGAP1-208	ENST00000547061	KIF12	Q96FN5	646 aa		11.26	□□□□□ -0.61
RACGAP1-208	ENST00000547061	PCDHB13	Q9Y5F0	798 aa		11.26	□□□□□ -0.61
RACGAP1-208	ENST00000547061	PYGB	P11216	843 aa		11.25	□□□□□ -0.61
RACGAP1-208	ENST00000547061	ARAP1	Q96P48	1450 aa		11.25	□□□□□ -0.61
RACGAP1-208	ENST00000547061	CHD1	O14646	1710 aa		11.24	□□□□□ -0.61
RACGAP1-208	ENST00000547061	GALR2	O43603	387 aa	Predicted RBP	11.24	□□□□□ -0.61
RACGAP1-208	ENST00000547061	MS4A3	Q96HJ5	214 aa		11.24	□□□□□ -0.61
RACGAP1-208	ENST00000547061	GRIN2A	Q12879	1464 aa		11.24	□□□□□ -0.61
RACGAP1-208	ENST00000547061	MAP3K13	O43283	966 aa		11.23	□□□□□ -0.61

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