RNA–Protein interactions for RNA: ENST00000547061.5

RACGAP1-208, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3

Gene RACGAP1, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-208ENST00000547061 AEBP2Q6ZN18 517 aaPredicted RBP22.29■■□□□ 1.16
RACGAP1-208ENST00000547061 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
RACGAP1-208ENST00000547061 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
RACGAP1-208ENST00000547061 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
RACGAP1-208ENST00000547061 FOXD1Q16676 465 aa17.67■□□□□ 0.42
RACGAP1-208ENST00000547061 PLPPR3Q6T4P5 718 aa17.65■□□□□ 0.42
RACGAP1-208ENST00000547061 ADRA2BP18089 450 aa16.84■□□□□ 0.29
RACGAP1-208ENST00000547061 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
RACGAP1-208ENST00000547061 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
RACGAP1-208ENST00000547061 MSH5O43196 834 aa16.54■□□□□ 0.24
RACGAP1-208ENST00000547061 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
RACGAP1-208ENST00000547061 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
RACGAP1-208ENST00000547061 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
RACGAP1-208ENST00000547061 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
RACGAP1-208ENST00000547061 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
RACGAP1-208ENST00000547061 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
RACGAP1-208ENST00000547061 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
RACGAP1-208ENST00000547061 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
RACGAP1-208ENST00000547061 KCNA4P22459 653 aa14.85□□□□□ -0.03
RACGAP1-208ENST00000547061 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
RACGAP1-208ENST00000547061 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
RACGAP1-208ENST00000547061 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
RACGAP1-208ENST00000547061 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
RACGAP1-208ENST00000547061 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
RACGAP1-208ENST00000547061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.134e-10■■■□□ 18
RACGAP1-208ENST00000547061 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
RACGAP1-208ENST00000547061 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
RACGAP1-208ENST00000547061 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
RACGAP1-208ENST00000547061 ABCC9O60706 1549 aa13.99□□□□□ -0.17
RACGAP1-208ENST00000547061 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
RACGAP1-208ENST00000547061 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
RACGAP1-208ENST00000547061 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
RACGAP1-208ENST00000547061 U3KPZ7 1027 aaPredicted RBP13.84□□□□□ -0.19
RACGAP1-208ENST00000547061 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
RACGAP1-208ENST00000547061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
RACGAP1-208ENST00000547061 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
RACGAP1-208ENST00000547061 APLP2Q06481 763 aa13.79□□□□□ -0.2
RACGAP1-208ENST00000547061 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
RACGAP1-208ENST00000547061 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
RACGAP1-208ENST00000547061 CAPN15O75808 1086 aa13.61□□□□□ -0.23
RACGAP1-208ENST00000547061 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
RACGAP1-208ENST00000547061 ZBTB22O15209 634 aa13.57□□□□□ -0.24
RACGAP1-208ENST00000547061 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
RACGAP1-208ENST00000547061 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
RACGAP1-208ENST00000547061 NACADO15069 1562 aa13.5□□□□□ -0.25
RACGAP1-208ENST00000547061 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
RACGAP1-208ENST00000547061 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
RACGAP1-208ENST00000547061 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
RACGAP1-208ENST00000547061 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
RACGAP1-208ENST00000547061 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
RACGAP1-208ENST00000547061 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
RACGAP1-208ENST00000547061 DSG3P32926 999 aa13.29□□□□□ -0.28
RACGAP1-208ENST00000547061 ABCB7O75027 752 aa13.27□□□□□ -0.29
RACGAP1-208ENST00000547061 DCAF8L2P0C7V8 631 aa13.21□□□□□ -0.29
RACGAP1-208ENST00000547061 ZCCHC6Q5VYS8 1495 aaKnown RBP13.21□□□□□ -0.3
RACGAP1-208ENST00000547061 ATF5Q9Y2D1 282 aaPredicted RBP13.2□□□□□ -0.3
RACGAP1-208ENST00000547061 POLA2Q14181 598 aa13.15□□□□□ -0.3
RACGAP1-208ENST00000547061 SHROOM4Q9ULL8 1493 aa13.15□□□□□ -0.3
RACGAP1-208ENST00000547061 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
RACGAP1-208ENST00000547061 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
RACGAP1-208ENST00000547061 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
RACGAP1-208ENST00000547061 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
RACGAP1-208ENST00000547061 FBLN2P98095 1184 aa12.94□□□□□ -0.34
RACGAP1-208ENST00000547061 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
RACGAP1-208ENST00000547061 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
RACGAP1-208ENST00000547061 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
RACGAP1-208ENST00000547061 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
RACGAP1-208ENST00000547061 CECR2Q9BXF3 1484 aa12.69□□□□□ -0.38
RACGAP1-208ENST00000547061 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
RACGAP1-208ENST00000547061 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
RACGAP1-208ENST00000547061 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
RACGAP1-208ENST00000547061 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
RACGAP1-208ENST00000547061 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
RACGAP1-208ENST00000547061 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
RACGAP1-208ENST00000547061 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
RACGAP1-208ENST00000547061 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
RACGAP1-208ENST00000547061 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
RACGAP1-208ENST00000547061 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
RACGAP1-208ENST00000547061 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
RACGAP1-208ENST00000547061 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
RACGAP1-208ENST00000547061 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
RACGAP1-208ENST00000547061 HMGXB3Q12766 1538 aa12.36□□□□□ -0.43
RACGAP1-208ENST00000547061 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
RACGAP1-208ENST00000547061 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
RACGAP1-208ENST00000547061 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
RACGAP1-208ENST00000547061 SMARCA4P51532 1647 aa12.31□□□□□ -0.44
RACGAP1-208ENST00000547061 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
RACGAP1-208ENST00000547061 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
RACGAP1-208ENST00000547061 PITPNM1O00562 1244 aa12.25□□□□□ -0.45
RACGAP1-208ENST00000547061 FKBP8Q14318 412 aa12.25□□□□□ -0.45
RACGAP1-208ENST00000547061 CUX2O14529 1486 aa12.22□□□□□ -0.45
RACGAP1-208ENST00000547061 BAZ1BQ9UIG0 1483 aaKnown RBP12.22□□□□□ -0.45
RACGAP1-208ENST00000547061 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
RACGAP1-208ENST00000547061 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
RACGAP1-208ENST00000547061 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
RACGAP1-208ENST00000547061 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
RACGAP1-208ENST00000547061 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
RACGAP1-208ENST00000547061 LAMC3Q9Y6N6 1575 aa12.12□□□□□ -0.47
RACGAP1-208ENST00000547061 PDS5BQ9NTI5 1447 aa12.11□□□□□ -0.47
RACGAP1-208ENST00000547061 CADPSQ9ULU8 1353 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms