RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
LDHC-208ENST00000544105 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.2
LDHC-208ENST00000544105 WDR62O43379 1518 aa16.33■□□□□ 0.2
LDHC-208ENST00000544105 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
LDHC-208ENST00000544105 CEP162Q5TB80 1403 aa16.31■□□□□ 0.2
LDHC-208ENST00000544105 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
LDHC-208ENST00000544105 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
LDHC-208ENST00000544105 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
LDHC-208ENST00000544105 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
LDHC-208ENST00000544105 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
LDHC-208ENST00000544105 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
LDHC-208ENST00000544105 CUL7Q14999 1698 aa16.23■□□□□ 0.19
LDHC-208ENST00000544105 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
LDHC-208ENST00000544105 CLIP1P30622 1438 aa16.22■□□□□ 0.19
LDHC-208ENST00000544105 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
LDHC-208ENST00000544105 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
LDHC-208ENST00000544105 APLP2Q06481 763 aa16.17■□□□□ 0.18
LDHC-208ENST00000544105 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
LDHC-208ENST00000544105 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.18
LDHC-208ENST00000544105 DSG3P32926 999 aa16.15■□□□□ 0.18
LDHC-208ENST00000544105 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
LDHC-208ENST00000544105 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
LDHC-208ENST00000544105 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
LDHC-208ENST00000544105 ZNF608Q9ULD9 1512 aaPredicted RBP16.09■□□□□ 0.17
LDHC-208ENST00000544105 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
LDHC-208ENST00000544105 TRHP20396 242 aaPredicted RBP16.08■□□□□ 0.16
LDHC-208ENST00000544105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
LDHC-208ENST00000544105 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
LDHC-208ENST00000544105 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
LDHC-208ENST00000544105 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
LDHC-208ENST00000544105 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
LDHC-208ENST00000544105 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
LDHC-208ENST00000544105 MAGI1Q96QZ7 1491 aaPredicted RBP16.02■□□□□ 0.15
LDHC-208ENST00000544105 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
LDHC-208ENST00000544105 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
LDHC-208ENST00000544105 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
LDHC-208ENST00000544105 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
LDHC-208ENST00000544105 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
LDHC-208ENST00000544105 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
LDHC-208ENST00000544105 PPARGC1BQ86YN6 1023 aaKnown RBP15.97■□□□□ 0.15
LDHC-208ENST00000544105 EFCAB5A4FU69 1503 aa15.97■□□□□ 0.15
LDHC-208ENST00000544105 FBLN2P98095 1184 aa15.96■□□□□ 0.15
LDHC-208ENST00000544105 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
LDHC-208ENST00000544105 ABCB7O75027 752 aa15.94■□□□□ 0.14
LDHC-208ENST00000544105 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
LDHC-208ENST00000544105 P3H3Q8IVL6 736 aa15.93■□□□□ 0.14
LDHC-208ENST00000544105 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
LDHC-208ENST00000544105 KIAA0586Q9BVV6 1533 aa15.89■□□□□ 0.13
LDHC-208ENST00000544105 IQGAP2Q13576 1575 aa15.89■□□□□ 0.13
LDHC-208ENST00000544105 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
LDHC-208ENST00000544105 TTBK1Q5TCY1 1321 aaPredicted RBP15.87■□□□□ 0.13
LDHC-208ENST00000544105 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
LDHC-208ENST00000544105 FHOD3Q2V2M9 1422 aa15.85■□□□□ 0.13
LDHC-208ENST00000544105 SAMD9Q5K651 1589 aa15.82■□□□□ 0.12
LDHC-208ENST00000544105 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
LDHC-208ENST00000544105 NUP160Q12769 1436 aa15.8■□□□□ 0.12
LDHC-208ENST00000544105 MAP3K1Q13233 1512 aa15.79■□□□□ 0.12
LDHC-208ENST00000544105 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
LDHC-208ENST00000544105 FYCO1Q9BQS8 1478 aa15.78■□□□□ 0.12
LDHC-208ENST00000544105 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
LDHC-208ENST00000544105 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.12
LDHC-208ENST00000544105 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
LDHC-208ENST00000544105 POTEHQ6S545 545 aa15.75■□□□□ 0.11
LDHC-208ENST00000544105 PCF11O94913 1555 aaKnown RBP15.74■□□□□ 0.11
LDHC-208ENST00000544105 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
LDHC-208ENST00000544105 TIAM1Q13009 1591 aa15.72■□□□□ 0.11
LDHC-208ENST00000544105 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
LDHC-208ENST00000544105 DISP1Q96F81 1524 aa15.69■□□□□ 0.1
LDHC-208ENST00000544105 KIAA0556O60303 1618 aa15.69■□□□□ 0.1
LDHC-208ENST00000544105 CHD1O14646 1710 aa15.69■□□□□ 0.1
LDHC-208ENST00000544105 LRRC9Q6ZRR7 1453 aa15.67■□□□□ 0.1
LDHC-208ENST00000544105 CCDC18Q5T9S5 1454 aa15.66■□□□□ 0.1
LDHC-208ENST00000544105 HECW1Q76N89 1606 aa15.65■□□□□ 0.1
LDHC-208ENST00000544105 CFAP43Q8NDM7 1665 aa15.65■□□□□ 0.1
LDHC-208ENST00000544105 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
LDHC-208ENST00000544105 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
LDHC-208ENST00000544105 PRG4Q92954 1404 aaPredicted RBP15.62■□□□□ 0.09
LDHC-208ENST00000544105 SLC4A1APQ9BWU0 796 aaKnown RBP15.59■□□□□ 0.09
LDHC-208ENST00000544105 PTPRGP23470 1445 aa15.58■□□□□ 0.08
LDHC-208ENST00000544105 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.08
LDHC-208ENST00000544105 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
LDHC-208ENST00000544105 HRCP23327 699 aa15.56■□□□□ 0.08
LDHC-208ENST00000544105 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
LDHC-208ENST00000544105 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
LDHC-208ENST00000544105 RRBP1Q9P2E9 1410 aaKnown RBP15.56■□□□□ 0.08
LDHC-208ENST00000544105 EHBP1L1Q8N3D4 1523 aa15.54■□□□□ 0.08
LDHC-208ENST00000544105 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
LDHC-208ENST00000544105 POLA2Q14181 598 aa15.54■□□□□ 0.08
LDHC-208ENST00000544105 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
LDHC-208ENST00000544105 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
LDHC-208ENST00000544105 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
LDHC-208ENST00000544105 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
LDHC-208ENST00000544105 NUP153P49790 1475 aaKnown RBP15.51■□□□□ 0.07
LDHC-208ENST00000544105 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
LDHC-208ENST00000544105 FAM50AQ14320 339 aaKnown RBP15.5■□□□□ 0.07
LDHC-208ENST00000544105 SUPT6HQ7KZ85 1726 aaKnown RBP15.5■□□□□ 0.07
LDHC-208ENST00000544105 PHLDB1Q86UU1 1377 aa15.49■□□□□ 0.07
LDHC-208ENST00000544105 CDK13Q14004 1512 aaKnown RBP15.49■□□□□ 0.07
LDHC-208ENST00000544105 LRRIQ1Q96JM4 1722 aa15.49■□□□□ 0.07
LDHC-208ENST00000544105 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms