RNA–Protein interactions for RNA: ENST00000543730.1

LRTM2-207, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 2

Gene LRTM2, Length 2,787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-207ENST00000543730 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
LRTM2-207ENST00000543730 RAD54L2Q9Y4B4 1467 aa21.09■□□□□ 0.97
LRTM2-207ENST00000543730 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
LRTM2-207ENST00000543730 PRDM2Q13029 1718 aa21.08■□□□□ 0.96
LRTM2-207ENST00000543730 TIAM1Q13009 1591 aa21.07■□□□□ 0.96
LRTM2-207ENST00000543730 MAP3K1Q13233 1512 aa21.07■□□□□ 0.96
LRTM2-207ENST00000543730 SETD5Q9C0A6 1442 aa21.03■□□□□ 0.96
LRTM2-207ENST00000543730 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
LRTM2-207ENST00000543730 TSHZ2Q9NRE2 1034 aa21■□□□□ 0.95
LRTM2-207ENST00000543730 LRRC9Q6ZRR7 1453 aa20.99■□□□□ 0.95
LRTM2-207ENST00000543730 PHLDB1Q86UU1 1377 aa20.95■□□□□ 0.94
LRTM2-207ENST00000543730 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
LRTM2-207ENST00000543730 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
LRTM2-207ENST00000543730 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
LRTM2-207ENST00000543730 FAM50AQ14320 339 aaKnown RBP20.93■□□□□ 0.94
LRTM2-207ENST00000543730 TOPBP1Q92547 1522 aa20.93■□□□□ 0.94
LRTM2-207ENST00000543730 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
LRTM2-207ENST00000543730 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
LRTM2-207ENST00000543730 FHOD3Q2V2M9 1422 aa20.9■□□□□ 0.94
LRTM2-207ENST00000543730 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
LRTM2-207ENST00000543730 TIMELESSQ9UNS1 1208 aa20.9■□□□□ 0.94
LRTM2-207ENST00000543730 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
LRTM2-207ENST00000543730 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
LRTM2-207ENST00000543730 PPP1R15AO75807 674 aaPredicted RBP20.85■□□□□ 0.93
LRTM2-207ENST00000543730 PCF11O94913 1555 aaKnown RBP20.84■□□□□ 0.93
LRTM2-207ENST00000543730 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
LRTM2-207ENST00000543730 FKBP8Q14318 412 aa20.82■□□□□ 0.92
LRTM2-207ENST00000543730 BCANQ96GW7 911 aa20.82■□□□□ 0.92
LRTM2-207ENST00000543730 URB2Q14146 1524 aaKnown RBP20.81■□□□□ 0.92
LRTM2-207ENST00000543730 ANP32EQ9BTT0 268 aa20.78■□□□□ 0.92
LRTM2-207ENST00000543730 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
LRTM2-207ENST00000543730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.91
LRTM2-207ENST00000543730 ANP32CO43423 234 aa20.75■□□□□ 0.91
LRTM2-207ENST00000543730 HIRIP3Q9BW71 556 aaPredicted RBP20.74■□□□□ 0.91
LRTM2-207ENST00000543730 NEFLP07196 543 aa20.74■□□□□ 0.91
LRTM2-207ENST00000543730 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
LRTM2-207ENST00000543730 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
LRTM2-207ENST00000543730 EFCAB5A4FU69 1503 aa20.7■□□□□ 0.9
LRTM2-207ENST00000543730 TRIM52Q96A61 297 aa20.69■□□□□ 0.9
LRTM2-207ENST00000543730 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
LRTM2-207ENST00000543730 TONSLQ96HA7 1378 aa20.68■□□□□ 0.9
LRTM2-207ENST00000543730 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
LRTM2-207ENST00000543730 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
LRTM2-207ENST00000543730 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
LRTM2-207ENST00000543730 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
LRTM2-207ENST00000543730 FGD6Q6ZV73 1430 aa20.65■□□□□ 0.9
LRTM2-207ENST00000543730 CCDC18Q5T9S5 1454 aa20.63■□□□□ 0.89
LRTM2-207ENST00000543730 CUL7Q14999 1698 aa20.62■□□□□ 0.89
LRTM2-207ENST00000543730 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
LRTM2-207ENST00000543730 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
LRTM2-207ENST00000543730 UACAQ9BZF9 1416 aa20.6■□□□□ 0.89
LRTM2-207ENST00000543730 MTUS2Q5JR59 1369 aa20.6■□□□□ 0.89
LRTM2-207ENST00000543730 CTTNBP2Q8WZ74 1663 aa20.6■□□□□ 0.89
LRTM2-207ENST00000543730 HFM1A2PYH4 1435 aa20.59■□□□□ 0.89
LRTM2-207ENST00000543730 RBM19Q9Y4C8 960 aaKnown RBP20.57■□□□□ 0.88
LRTM2-207ENST00000543730 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
LRTM2-207ENST00000543730 PTPRKQ15262 1439 aa20.55■□□□□ 0.88
LRTM2-207ENST00000543730 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
LRTM2-207ENST00000543730 ABCA5Q8WWZ7 1642 aa20.54■□□□□ 0.88
LRTM2-207ENST00000543730 NAIPQ13075 1403 aa20.51■□□□□ 0.87
LRTM2-207ENST00000543730 CHIC2Q9UKJ5 165 aa20.49■□□□□ 0.87
LRTM2-207ENST00000543730 MYOM3Q5VTT5 1437 aa20.48■□□□□ 0.87
LRTM2-207ENST00000543730 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
LRTM2-207ENST00000543730 HNRNPUQ00839 825 aaKnown RBP eCLIP20.45■□□□□ 0.86
LRTM2-207ENST00000543730 KDM5BQ9UGL1 1544 aa20.45■□□□□ 0.86
LRTM2-207ENST00000543730 LRRIQ1Q96JM4 1722 aa20.45■□□□□ 0.86
LRTM2-207ENST00000543730 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
LRTM2-207ENST00000543730 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
LRTM2-207ENST00000543730 SUPT6HQ7KZ85 1726 aaKnown RBP20.43■□□□□ 0.86
LRTM2-207ENST00000543730 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
LRTM2-207ENST00000543730 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
LRTM2-207ENST00000543730 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
LRTM2-207ENST00000543730 EHBP1L1Q8N3D4 1523 aa20.4■□□□□ 0.86
LRTM2-207ENST00000543730 ZNF608Q9ULD9 1512 aaPredicted RBP20.39■□□□□ 0.85
LRTM2-207ENST00000543730 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
LRTM2-207ENST00000543730 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
LRTM2-207ENST00000543730 MAGI3Q5TCQ9 1506 aa20.36■□□□□ 0.85
LRTM2-207ENST00000543730 UGGT2Q9NYU1 1516 aa20.35■□□□□ 0.85
LRTM2-207ENST00000543730 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.84
LRTM2-207ENST00000543730 FBLN2P98095 1184 aa20.33■□□□□ 0.84
LRTM2-207ENST00000543730 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.84
LRTM2-207ENST00000543730 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
LRTM2-207ENST00000543730 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
LRTM2-207ENST00000543730 HECW1Q76N89 1606 aa20.32■□□□□ 0.84
LRTM2-207ENST00000543730 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
LRTM2-207ENST00000543730 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
LRTM2-207ENST00000543730 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
LRTM2-207ENST00000543730 GCC2Q8IWJ2 1684 aa20.32■□□□□ 0.84
LRTM2-207ENST00000543730 DENND4BO75064 1496 aaPredicted RBP20.29■□□□□ 0.84
LRTM2-207ENST00000543730 TCOF1Q13428 1488 aaKnown RBP20.29■□□□□ 0.84
LRTM2-207ENST00000543730 ERICH6BQ5W0A0 696 aa20.29■□□□□ 0.84
LRTM2-207ENST00000543730 MSH5O43196 834 aa20.29■□□□□ 0.84
LRTM2-207ENST00000543730 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
LRTM2-207ENST00000543730 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
LRTM2-207ENST00000543730 IQGAP2Q13576 1575 aa20.28■□□□□ 0.84
LRTM2-207ENST00000543730 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
LRTM2-207ENST00000543730 FOXD1Q16676 465 aa20.27■□□□□ 0.83
LRTM2-207ENST00000543730 BCL11AQ9H165 835 aa20.27■□□□□ 0.83
LRTM2-207ENST00000543730 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
LRTM2-207ENST00000543730 EPRSP07814 1512 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms