RNA–Protein interactions for RNA: ENST00000542946.1

TMEM138-209, Transcript of transmembrane protein 138, humanhuman

TSL 1 (best) BASIC

Gene TMEM138, Length 2,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM138-209ENST00000542946 ABCA5Q8WWZ7 1642 aa11.48□□□□□ -0.57
TMEM138-209ENST00000542946 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
TMEM138-209ENST00000542946 WDR62O43379 1518 aa11.46□□□□□ -0.57
TMEM138-209ENST00000542946 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
TMEM138-209ENST00000542946 TARBP1Q13395 1621 aaKnown RBP11.44□□□□□ -0.58
TMEM138-209ENST00000542946 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
TMEM138-209ENST00000542946 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
TMEM138-209ENST00000542946 EFCAB5A4FU69 1503 aa11.42□□□□□ -0.58
TMEM138-209ENST00000542946 APLP2Q06481 763 aa11.41□□□□□ -0.58
TMEM138-209ENST00000542946 MAP3K1Q13233 1512 aa11.41□□□□□ -0.58
TMEM138-209ENST00000542946 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
TMEM138-209ENST00000542946 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.586e-7■■□□□ 12.6
TMEM138-209ENST00000542946 PBRM1Q86U86 1689 aa11.4□□□□□ -0.58
TMEM138-209ENST00000542946 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
TMEM138-209ENST00000542946 NPM3O75607 178 aaKnown RBP11.39□□□□□ -0.59
TMEM138-209ENST00000542946 PPARGC1BQ86YN6 1023 aaKnown RBP11.39□□□□□ -0.59
TMEM138-209ENST00000542946 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
TMEM138-209ENST00000542946 GRIN2BQ13224 1484 aa11.36□□□□□ -0.59
TMEM138-209ENST00000542946 FHAD1B1AJZ9 1412 aa11.35□□□□□ -0.59
TMEM138-209ENST00000542946 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
TMEM138-209ENST00000542946 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
TMEM138-209ENST00000542946 SAMD9Q5K651 1589 aa11.3□□□□□ -0.6
TMEM138-209ENST00000542946 TIAM1Q13009 1591 aa11.3□□□□□ -0.6
TMEM138-209ENST00000542946 TTBK1Q5TCY1 1321 aaPredicted RBP11.3□□□□□ -0.6
TMEM138-209ENST00000542946 EIF4G3O43432 1585 aaKnown RBP11.29□□□□□ -0.6
TMEM138-209ENST00000542946 FYCO1Q9BQS8 1478 aa11.29□□□□□ -0.6
TMEM138-209ENST00000542946 P3H3Q8IVL6 736 aa11.27□□□□□ -0.6
TMEM138-209ENST00000542946 SNAPC4Q5SXM2 1469 aa11.27□□□□□ -0.61
TMEM138-209ENST00000542946 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
TMEM138-209ENST00000542946 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
TMEM138-209ENST00000542946 CHMP7Q8WUX9 453 aaPredicted RBP11.25□□□□□ -0.61
TMEM138-209ENST00000542946 PCF11O94913 1555 aaKnown RBP11.25□□□□□ -0.61
TMEM138-209ENST00000542946 FBLN2P98095 1184 aa11.25□□□□□ -0.61
TMEM138-209ENST00000542946 CASKIN1Q8WXD9 1431 aa11.25□□□□□ -0.61
TMEM138-209ENST00000542946 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
TMEM138-209ENST00000542946 MAGI1Q96QZ7 1491 aaPredicted RBP11.24□□□□□ -0.61
TMEM138-209ENST00000542946 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
TMEM138-209ENST00000542946 IQGAP2Q13576 1575 aa11.22□□□□□ -0.61
TMEM138-209ENST00000542946 LRRC9Q6ZRR7 1453 aa11.21□□□□□ -0.62
TMEM138-209ENST00000542946 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.62
TMEM138-209ENST00000542946 SYNJ2O15056 1496 aa11.2□□□□□ -0.62
TMEM138-209ENST00000542946 GRIN2AQ12879 1464 aa11.2□□□□□ -0.62
TMEM138-209ENST00000542946 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
TMEM138-209ENST00000542946 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
TMEM138-209ENST00000542946 UGGT2Q9NYU1 1516 aa11.18□□□□□ -0.62
TMEM138-209ENST00000542946 KIAA0586Q9BVV6 1533 aa11.17□□□□□ -0.62
TMEM138-209ENST00000542946 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
TMEM138-209ENST00000542946 CCDC18Q5T9S5 1454 aa11.16□□□□□ -0.62
TMEM138-209ENST00000542946 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
TMEM138-209ENST00000542946 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.62
TMEM138-209ENST00000542946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM138-209ENST00000542946 CLSPNQ9HAW4 1339 aa11.14□□□□□ -0.63
TMEM138-209ENST00000542946 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
TMEM138-209ENST00000542946 LRRIQ1Q96JM4 1722 aa11.13□□□□□ -0.63
TMEM138-209ENST00000542946 SUPT6HQ7KZ85 1726 aaKnown RBP11.13□□□□□ -0.63
TMEM138-209ENST00000542946 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
TMEM138-209ENST00000542946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
TMEM138-209ENST00000542946 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
TMEM138-209ENST00000542946 NUP160Q12769 1436 aa11.11□□□□□ -0.63
TMEM138-209ENST00000542946 KIAA0556O60303 1618 aa11.11□□□□□ -0.63
TMEM138-209ENST00000542946 JPH4Q96JJ6 628 aa11.09□□□□□ -0.63
TMEM138-209ENST00000542946 HNRNPUL2Q1KMD3 747 aaKnown RBP11.07□□□□□ -0.64
TMEM138-209ENST00000542946 CARMIL2Q6F5E8 1435 aa11.06□□□□□ -0.64
TMEM138-209ENST00000542946 DISP1Q96F81 1524 aa11.06□□□□□ -0.64
TMEM138-209ENST00000542946 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
TMEM138-209ENST00000542946 RAPGEF6Q8TEU7 1601 aa11.04□□□□□ -0.64
TMEM138-209ENST00000542946 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
TMEM138-209ENST00000542946 PHLDB1Q86UU1 1377 aa11.04□□□□□ -0.64
TMEM138-209ENST00000542946 CHD1O14646 1710 aa11.04□□□□□ -0.64
TMEM138-209ENST00000542946 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
TMEM138-209ENST00000542946 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
TMEM138-209ENST00000542946 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
TMEM138-209ENST00000542946 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
TMEM138-209ENST00000542946 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
TMEM138-209ENST00000542946 PRG4Q92954 1404 aaPredicted RBP11□□□□□ -0.65
TMEM138-209ENST00000542946 SETD5Q9C0A6 1442 aa10.99□□□□□ -0.65
TMEM138-209ENST00000542946 PTPN23Q9H3S7 1636 aa10.99□□□□□ -0.65
TMEM138-209ENST00000542946 TCOF1Q13428 1488 aaKnown RBP10.99□□□□□ -0.65
TMEM138-209ENST00000542946 DHX57Q6P158 1386 aaKnown RBP10.99□□□□□ -0.65
TMEM138-209ENST00000542946 ADCY10Q96PN6 1610 aa10.98□□□□□ -0.65
TMEM138-209ENST00000542946 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
TMEM138-209ENST00000542946 MIA2Q96PC5 1412 aa10.98□□□□□ -0.65
TMEM138-209ENST00000542946 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
TMEM138-209ENST00000542946 ITSN2Q9NZM3 1697 aa10.96□□□□□ -0.65
TMEM138-209ENST00000542946 ITGAEP38570 1179 aa10.96□□□□□ -0.66
TMEM138-209ENST00000542946 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.66
TMEM138-209ENST00000542946 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.66
TMEM138-209ENST00000542946 MAGI3Q5TCQ9 1506 aa10.95□□□□□ -0.66
TMEM138-209ENST00000542946 PTPRGP23470 1445 aa10.95□□□□□ -0.66
TMEM138-209ENST00000542946 PLB1Q6P1J6 1458 aa10.95□□□□□ -0.66
TMEM138-209ENST00000542946 CDK13Q14004 1512 aaKnown RBP10.95□□□□□ -0.66
TMEM138-209ENST00000542946 NUP153P49790 1475 aaKnown RBP10.95□□□□□ -0.66
TMEM138-209ENST00000542946 GCC2Q8IWJ2 1684 aa10.95□□□□□ -0.66
TMEM138-209ENST00000542946 AKNAQ7Z591 1439 aa10.94□□□□□ -0.66
TMEM138-209ENST00000542946 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
TMEM138-209ENST00000542946 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
TMEM138-209ENST00000542946 ABCA8O94911 1581 aa10.92□□□□□ -0.66
TMEM138-209ENST00000542946 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
TMEM138-209ENST00000542946 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
TMEM138-209ENST00000542946 FKBP8Q14318 412 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms