RNA–Protein interactions for RNA: ENST00000542931.6

TDGF1-205, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TDGF1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-205ENST00000542931 IFT140Q96RY7 1462 aa18.39■□□□□ 0.54
TDGF1-205ENST00000542931 TOP2BQ02880 1626 aa18.39■□□□□ 0.53
TDGF1-205ENST00000542931 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
TDGF1-205ENST00000542931 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
TDGF1-205ENST00000542931 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
TDGF1-205ENST00000542931 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
TDGF1-205ENST00000542931 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
TDGF1-205ENST00000542931 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
TDGF1-205ENST00000542931 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
TDGF1-205ENST00000542931 ZNF608Q9ULD9 1512 aaPredicted RBP18.26■□□□□ 0.51
TDGF1-205ENST00000542931 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
TDGF1-205ENST00000542931 SOGA1O94964 1423 aa18.25■□□□□ 0.51
TDGF1-205ENST00000542931 ABCA10Q8WWZ4 1543 aa18.23■□□□□ 0.51
TDGF1-205ENST00000542931 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
TDGF1-205ENST00000542931 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
TDGF1-205ENST00000542931 PBRM1Q86U86 1689 aa18.17■□□□□ 0.5
TDGF1-205ENST00000542931 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
TDGF1-205ENST00000542931 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
TDGF1-205ENST00000542931 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
TDGF1-205ENST00000542931 GRIN2BQ13224 1484 aa18.08■□□□□ 0.49
TDGF1-205ENST00000542931 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
TDGF1-205ENST00000542931 MAGI1Q96QZ7 1491 aaPredicted RBP18.06■□□□□ 0.48
TDGF1-205ENST00000542931 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
TDGF1-205ENST00000542931 CHD1O14646 1710 aa18.04■□□□□ 0.48
TDGF1-205ENST00000542931 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
TDGF1-205ENST00000542931 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
TDGF1-205ENST00000542931 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
TDGF1-205ENST00000542931 FBLN2P98095 1184 aa17.99■□□□□ 0.47
TDGF1-205ENST00000542931 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
TDGF1-205ENST00000542931 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
TDGF1-205ENST00000542931 CUL7Q14999 1698 aa17.94■□□□□ 0.46
TDGF1-205ENST00000542931 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
TDGF1-205ENST00000542931 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
TDGF1-205ENST00000542931 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
TDGF1-205ENST00000542931 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
TDGF1-205ENST00000542931 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
TDGF1-205ENST00000542931 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
TDGF1-205ENST00000542931 IGF1RP08069 1367 aa17.82■□□□□ 0.44
TDGF1-205ENST00000542931 RUSC2Q8N2Y8 1516 aa17.81■□□□□ 0.44
TDGF1-205ENST00000542931 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
TDGF1-205ENST00000542931 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
TDGF1-205ENST00000542931 NUP160Q12769 1436 aa17.8■□□□□ 0.44
TDGF1-205ENST00000542931 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
TDGF1-205ENST00000542931 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
TDGF1-205ENST00000542931 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
TDGF1-205ENST00000542931 EEA1Q15075 1411 aa17.76■□□□□ 0.43
TDGF1-205ENST00000542931 REM2Q8IYK8 340 aaPredicted RBP17.75■□□□□ 0.43
TDGF1-205ENST00000542931 POTEHQ6S545 545 aa17.73■□□□□ 0.43
TDGF1-205ENST00000542931 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
TDGF1-205ENST00000542931 SHROOM2Q13796 1616 aa17.71■□□□□ 0.43
TDGF1-205ENST00000542931 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
TDGF1-205ENST00000542931 CHRDL2Q6WN34 429 aa17.69■□□□□ 0.42
TDGF1-205ENST00000542931 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
TDGF1-205ENST00000542931 RIMBP3CA6NJZ7 1639 aa17.69■□□□□ 0.42
TDGF1-205ENST00000542931 RIMBP3BA6NNM3 1639 aa17.69■□□□□ 0.42
TDGF1-205ENST00000542931 RIMBP3Q9UFD9 1639 aa17.69■□□□□ 0.42
TDGF1-205ENST00000542931 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
TDGF1-205ENST00000542931 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
TDGF1-205ENST00000542931 SSUH2Q9Y2M2 353 aa17.64■□□□□ 0.41
TDGF1-205ENST00000542931 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
TDGF1-205ENST00000542931 KIAA0586Q9BVV6 1533 aa17.62■□□□□ 0.41
TDGF1-205ENST00000542931 KIF21BO75037 1637 aa17.62■□□□□ 0.41
TDGF1-205ENST00000542931 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
TDGF1-205ENST00000542931 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
TDGF1-205ENST00000542931 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
TDGF1-205ENST00000542931 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
TDGF1-205ENST00000542931 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
TDGF1-205ENST00000542931 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
TDGF1-205ENST00000542931 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
TDGF1-205ENST00000542931 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
TDGF1-205ENST00000542931 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
TDGF1-205ENST00000542931 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
TDGF1-205ENST00000542931 DISP1Q96F81 1524 aa17.43■□□□□ 0.38
TDGF1-205ENST00000542931 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
TDGF1-205ENST00000542931 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
TDGF1-205ENST00000542931 PIP4P2Q8N4L2 257 aa17.38■□□□□ 0.37
TDGF1-205ENST00000542931 SPDYE1Q8NFV5 336 aaPredicted RBP17.36■□□□□ 0.37
TDGF1-205ENST00000542931 FXR2P51116 673 aaKnown RBP eCLIP17.35■□□□□ 0.37
TDGF1-205ENST00000542931 EFCAB5A4FU69 1503 aa17.34■□□□□ 0.37
TDGF1-205ENST00000542931 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
TDGF1-205ENST00000542931 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
TDGF1-205ENST00000542931 ADCY10Q96PN6 1610 aa17.31■□□□□ 0.36
TDGF1-205ENST00000542931 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
TDGF1-205ENST00000542931 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
TDGF1-205ENST00000542931 PTPRGP23470 1445 aa17.28■□□□□ 0.36
TDGF1-205ENST00000542931 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
TDGF1-205ENST00000542931 UHRF1BP1LA0JNW5 1464 aa17.24■□□□□ 0.35
TDGF1-205ENST00000542931 ABCA8O94911 1581 aa17.23■□□□□ 0.35
TDGF1-205ENST00000542931 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
TDGF1-205ENST00000542931 UACAQ9BZF9 1416 aa17.21■□□□□ 0.34
TDGF1-205ENST00000542931 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
TDGF1-205ENST00000542931 FHOD3Q2V2M9 1422 aa17.19■□□□□ 0.34
TDGF1-205ENST00000542931 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
TDGF1-205ENST00000542931 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
TDGF1-205ENST00000542931 RAPGEF6Q8TEU7 1601 aa17.18■□□□□ 0.34
TDGF1-205ENST00000542931 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
TDGF1-205ENST00000542931 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
TDGF1-205ENST00000542931 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
TDGF1-205ENST00000542931 CLIP1P30622 1438 aa17.11■□□□□ 0.33
TDGF1-205ENST00000542931 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms