RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 KCNH8Q96L42 1107 aa7.61□□□□□ -1.19
KDM3B-209ENST00000542866 RAD54L2Q9Y4B4 1467 aa7.61□□□□□ -1.19
KDM3B-209ENST00000542866 ITGAEP38570 1179 aa7.61□□□□□ -1.19
KDM3B-209ENST00000542866 CUX1P39880 1505 aa7.6□□□□□ -1.19
KDM3B-209ENST00000542866 FKBP8Q14318 412 aa7.6□□□□□ -1.19
KDM3B-209ENST00000542866 VPS8Q8N3P4 1428 aa7.6□□□□□ -1.19
KDM3B-209ENST00000542866 DNMBPQ6XZF7 1577 aa7.6□□□□□ -1.19
KDM3B-209ENST00000542866 POLA1P09884 1462 aaPredicted RBP7.6□□□□□ -1.19
KDM3B-209ENST00000542866 DHX57Q6P158 1386 aaKnown RBP7.6□□□□□ -1.19
KDM3B-209ENST00000542866 URB2Q14146 1524 aaKnown RBP7.59□□□□□ -1.19
KDM3B-209ENST00000542866 CARMIL1Q5VZK9 1371 aa7.59□□□□□ -1.19
KDM3B-209ENST00000542866 SYNJ1O43426 1573 aa7.59□□□□□ -1.19
KDM3B-209ENST00000542866 IFT140Q96RY7 1462 aa7.58□□□□□ -1.2
KDM3B-209ENST00000542866 TOP2BQ02880 1626 aa7.57□□□□□ -1.2
KDM3B-209ENST00000542866 AQRO60306 1485 aaKnown RBP eCLIP7.57□□□□□ -1.23e-7■■■■■ 31
KDM3B-209ENST00000542866 P3H3Q8IVL6 736 aa7.57□□□□□ -1.2
KDM3B-209ENST00000542866 GAPVD1Q14C86 1478 aa7.56□□□□□ -1.2
KDM3B-209ENST00000542866 NEFLP07196 543 aa7.56□□□□□ -1.2
KDM3B-209ENST00000542866 KANK4Q5T7N3 995 aaPredicted RBP7.56□□□□□ -1.2
KDM3B-209ENST00000542866 RTN4Q9NQC3 1192 aaKnown RBP7.56□□□□□ -1.2
KDM3B-209ENST00000542866 DDX10Q13206 875 aaKnown RBP7.55□□□□□ -1.2
KDM3B-209ENST00000542866 RAPGEF2Q9Y4G8 1499 aa7.54□□□□□ -1.2
KDM3B-209ENST00000542866 IGF1RP08069 1367 aa7.53□□□□□ -1.2
KDM3B-209ENST00000542866 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
KDM3B-209ENST00000542866 KIF21AQ7Z4S6 1674 aa7.53□□□□□ -1.2
KDM3B-209ENST00000542866 GRIN2BQ13224 1484 aa7.52□□□□□ -1.2
KDM3B-209ENST00000542866 TRIM52Q96A61 297 aa7.52□□□□□ -1.21
KDM3B-209ENST00000542866 KIF21BO75037 1637 aa7.51□□□□□ -1.21
KDM3B-209ENST00000542866 ABCA10Q8WWZ4 1543 aa7.51□□□□□ -1.21
KDM3B-209ENST00000542866 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
KDM3B-209ENST00000542866 WDR62O43379 1518 aa7.5□□□□□ -1.21
KDM3B-209ENST00000542866 OSCARQ8IYS5 282 aa7.49□□□□□ -1.21
KDM3B-209ENST00000542866 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
KDM3B-209ENST00000542866 FHAD1B1AJZ9 1412 aa7.48□□□□□ -1.21
KDM3B-209ENST00000542866 ARID3CA6NKF2 412 aa7.48□□□□□ -1.21
KDM3B-209ENST00000542866 BIVM-ERCC5R4GMW8 1640 aa7.48□□□□□ -1.21
KDM3B-209ENST00000542866 SIN3AQ96ST3 1273 aa7.48□□□□□ -1.21
KDM3B-209ENST00000542866 DNAJC5Q9H3Z4 198 aa7.47□□□□□ -1.21
KDM3B-209ENST00000542866 PRDM2Q13029 1718 aa7.47□□□□□ -1.21
KDM3B-209ENST00000542866 THOC2Q8NI27 1593 aaKnown RBP7.47□□□□□ -1.21
KDM3B-209ENST00000542866 SNAPC4Q5SXM2 1469 aa7.46□□□□□ -1.21
KDM3B-209ENST00000542866 ANP32CO43423 234 aa7.46□□□□□ -1.21
KDM3B-209ENST00000542866 NPM1P06748 294 aaKnown RBP eCLIP7.46□□□□□ -1.22
KDM3B-209ENST00000542866 CCNB3Q8WWL7 1395 aa7.46□□□□□ -1.22
KDM3B-209ENST00000542866 JPH4Q96JJ6 628 aa7.45□□□□□ -1.22
KDM3B-209ENST00000542866 RAB3GAP2Q9H2M9 1393 aa7.45□□□□□ -1.22
KDM3B-209ENST00000542866 IRX6P78412 446 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-209ENST00000542866 FAM50AQ14320 339 aaKnown RBP7.44□□□□□ -1.22
KDM3B-209ENST00000542866 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
KDM3B-209ENST00000542866 CDK11AQ9UQ88 783 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-209ENST00000542866 MSH5O43196 834 aa7.43□□□□□ -1.22
KDM3B-209ENST00000542866 ARAP1Q96P48 1450 aa7.43□□□□□ -1.22
KDM3B-209ENST00000542866 RRBP1Q9P2E9 1410 aaKnown RBP7.43□□□□□ -1.22
KDM3B-209ENST00000542866 EIF5BO60841 1220 aaKnown RBP7.43□□□□□ -1.22
KDM3B-209ENST00000542866 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-209ENST00000542866 ERICH3Q5RHP9 1530 aa7.42□□□□□ -1.22
KDM3B-209ENST00000542866 PRXQ9BXM0 1461 aa7.42□□□□□ -1.22
KDM3B-209ENST00000542866 PPP1R15AO75807 674 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-209ENST00000542866 SYNJ2O15056 1496 aa7.41□□□□□ -1.22
KDM3B-209ENST00000542866 CCER2I3L3R5 266 aa7.4□□□□□ -1.22
KDM3B-209ENST00000542866 HNRNPUQ00839 825 aaKnown RBP eCLIP7.4□□□□□ -1.23
KDM3B-209ENST00000542866 WDR97A6NE52 1622 aa7.39□□□□□ -1.23
KDM3B-209ENST00000542866 SETD5Q9C0A6 1442 aa7.39□□□□□ -1.23
KDM3B-209ENST00000542866 EIF4G3O43432 1585 aaKnown RBP7.38□□□□□ -1.23
KDM3B-209ENST00000542866 GRIN2AQ12879 1464 aa7.38□□□□□ -1.23
KDM3B-209ENST00000542866 MAPKBP1O60336 1514 aa7.38□□□□□ -1.23
KDM3B-209ENST00000542866 ARXQ96QS3 562 aa7.37□□□□□ -1.23
KDM3B-209ENST00000542866 TARBP1Q13395 1621 aaKnown RBP7.37□□□□□ -1.23
KDM3B-209ENST00000542866 CUL7Q14999 1698 aa7.36□□□□□ -1.23
KDM3B-209ENST00000542866 MYT1LQ9UL68 1186 aa7.36□□□□□ -1.23
KDM3B-209ENST00000542866 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
KDM3B-209ENST00000542866 PLEKHG5O94827 1062 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 PTPRGP23470 1445 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 FHOD3Q2V2M9 1422 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 MTUS2Q5JR59 1369 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 CYB5RLQ6IPT4 315 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 KIAA0586Q9BVV6 1533 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 FMN1Q68DA7 1419 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 FANCIQ9NVI1 1328 aa7.35□□□□□ -1.23
KDM3B-209ENST00000542866 PRG4Q92954 1404 aaPredicted RBP7.35□□□□□ -1.23
KDM3B-209ENST00000542866 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
KDM3B-209ENST00000542866 TONSLQ96HA7 1378 aa7.34□□□□□ -1.23
KDM3B-209ENST00000542866 ABCA5Q8WWZ7 1642 aa7.33□□□□□ -1.24
KDM3B-209ENST00000542866 PHLDB1Q86UU1 1377 aa7.32□□□□□ -1.24
KDM3B-209ENST00000542866 ADAMTS12P58397 1594 aa7.32□□□□□ -1.24
KDM3B-209ENST00000542866 DEKP35659 375 aaKnown RBP7.32□□□□□ -1.24
KDM3B-209ENST00000542866 ZNF777Q9ULD5 760 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-209ENST00000542866 NBR1Q14596 966 aa7.31□□□□□ -1.24
KDM3B-209ENST00000542866 B4GALNT3Q6L9W6 998 aa7.31□□□□□ -1.24
KDM3B-209ENST00000542866 PPP4R2Q9NY27 417 aa7.31□□□□□ -1.24
KDM3B-209ENST00000542866 IQGAP2Q13576 1575 aa7.3□□□□□ -1.24
KDM3B-209ENST00000542866 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
KDM3B-209ENST00000542866 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
KDM3B-209ENST00000542866 NUP160Q12769 1436 aa7.28□□□□□ -1.24
KDM3B-209ENST00000542866 TRHP20396 242 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-209ENST00000542866 CNGB1Q14028 1251 aaPredicted RBP7.28□□□□□ -1.24
KDM3B-209ENST00000542866 LRRC9Q6ZRR7 1453 aa7.28□□□□□ -1.24
KDM3B-209ENST00000542866 EFCAB5A4FU69 1503 aa7.27□□□□□ -1.25
KDM3B-209ENST00000542866 TIAM1Q13009 1591 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms