RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 SETD5Q9C0A6 1442 aa9.8□□□□□ -0.84
NKRF-204ENST00000542113 CC2D2AQ9P2K1 1620 aa9.8□□□□□ -0.84
NKRF-204ENST00000542113 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
NKRF-204ENST00000542113 RAB3GAP2Q9H2M9 1393 aa9.79□□□□□ -0.84
NKRF-204ENST00000542113 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.84
NKRF-204ENST00000542113 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
NKRF-204ENST00000542113 FYCO1Q9BQS8 1478 aa9.79□□□□□ -0.84
NKRF-204ENST00000542113 CUL7Q14999 1698 aa9.79□□□□□ -0.84
NKRF-204ENST00000542113 ABCA10Q8WWZ4 1543 aa9.79□□□□□ -0.84
NKRF-204ENST00000542113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.79□□□□□ -0.84
NKRF-204ENST00000542113 PCF11O94913 1555 aaKnown RBP9.76□□□□□ -0.85
NKRF-204ENST00000542113 CASKIN1Q8WXD9 1431 aa9.76□□□□□ -0.85
NKRF-204ENST00000542113 FMN1Q68DA7 1419 aa9.75□□□□□ -0.85
NKRF-204ENST00000542113 MAPKBP1O60336 1514 aa9.75□□□□□ -0.85
NKRF-204ENST00000542113 ITGAEP38570 1179 aa9.75□□□□□ -0.85
NKRF-204ENST00000542113 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
NKRF-204ENST00000542113 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
NKRF-204ENST00000542113 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
NKRF-204ENST00000542113 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
NKRF-204ENST00000542113 FAM50AQ14320 339 aaKnown RBP9.72□□□□□ -0.85
NKRF-204ENST00000542113 FHOD3Q2V2M9 1422 aa9.7□□□□□ -0.86
NKRF-204ENST00000542113 LAMC3Q9Y6N6 1575 aa9.7□□□□□ -0.86
NKRF-204ENST00000542113 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
NKRF-204ENST00000542113 RAD54L2Q9Y4B4 1467 aa9.68□□□□□ -0.86
NKRF-204ENST00000542113 FGD6Q6ZV73 1430 aa9.67□□□□□ -0.86
NKRF-204ENST00000542113 ATP1B4Q9UN42 357 aaPredicted RBP9.67□□□□□ -0.86
NKRF-204ENST00000542113 WDR97A6NE52 1622 aa9.67□□□□□ -0.86
NKRF-204ENST00000542113 MTUS2Q5JR59 1369 aa9.66□□□□□ -0.86
NKRF-204ENST00000542113 KIF21AQ7Z4S6 1674 aa9.66□□□□□ -0.86
NKRF-204ENST00000542113 SNAPC4Q5SXM2 1469 aa9.65□□□□□ -0.86
NKRF-204ENST00000542113 SAMD9Q5K651 1589 aa9.65□□□□□ -0.86
NKRF-204ENST00000542113 P3H3Q8IVL6 736 aa9.64□□□□□ -0.87
NKRF-204ENST00000542113 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
NKRF-204ENST00000542113 PDS5BQ9NTI5 1447 aa9.64□□□□□ -0.87
NKRF-204ENST00000542113 EHBP1L1Q8N3D4 1523 aa9.64□□□□□ -0.87
NKRF-204ENST00000542113 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
NKRF-204ENST00000542113 SUPT16HQ9Y5B9 1047 aaKnown RBP9.63□□□□□ -0.87
NKRF-204ENST00000542113 UACAQ9BZF9 1416 aa9.63□□□□□ -0.87
NKRF-204ENST00000542113 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
NKRF-204ENST00000542113 TONSLQ96HA7 1378 aa9.63□□□□□ -0.87
NKRF-204ENST00000542113 GAPVD1Q14C86 1478 aa9.62□□□□□ -0.87
NKRF-204ENST00000542113 SUPT6HQ7KZ85 1726 aaKnown RBP9.62□□□□□ -0.87
NKRF-204ENST00000542113 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
NKRF-204ENST00000542113 CCER2I3L3R5 266 aa9.61□□□□□ -0.87
NKRF-204ENST00000542113 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
NKRF-204ENST00000542113 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
NKRF-204ENST00000542113 GRIN2BQ13224 1484 aa9.61□□□□□ -0.87
NKRF-204ENST00000542113 NESP48681 1621 aa9.6□□□□□ -0.87
NKRF-204ENST00000542113 NCOA2Q15596 1464 aa9.6□□□□□ -0.87
NKRF-204ENST00000542113 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
NKRF-204ENST00000542113 PTPN23Q9H3S7 1636 aa9.59□□□□□ -0.87
NKRF-204ENST00000542113 ANP32CO43423 234 aa9.59□□□□□ -0.87
NKRF-204ENST00000542113 AKNAQ7Z591 1439 aa9.58□□□□□ -0.88
NKRF-204ENST00000542113 DDX10Q13206 875 aaKnown RBP9.58□□□□□ -0.88
NKRF-204ENST00000542113 HECW1Q76N89 1606 aa9.57□□□□□ -0.88
NKRF-204ENST00000542113 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
NKRF-204ENST00000542113 NAIPQ13075 1403 aa9.56□□□□□ -0.88
NKRF-204ENST00000542113 NEFLP07196 543 aa9.56□□□□□ -0.88
NKRF-204ENST00000542113 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
NKRF-204ENST00000542113 TDRD9Q8NDG6 1382 aaKnown RBP9.56□□□□□ -0.88
NKRF-204ENST00000542113 TCOF1Q13428 1488 aaKnown RBP9.55□□□□□ -0.88
NKRF-204ENST00000542113 MIA2Q96PC5 1412 aa9.54□□□□□ -0.88
NKRF-204ENST00000542113 GCC2Q8IWJ2 1684 aa9.53□□□□□ -0.88
NKRF-204ENST00000542113 IQGAP2Q13576 1575 aa9.52□□□□□ -0.88
NKRF-204ENST00000542113 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
NKRF-204ENST00000542113 TARBP1Q13395 1621 aaKnown RBP9.52□□□□□ -0.89
NKRF-204ENST00000542113 LRRIQ1Q96JM4 1722 aa9.52□□□□□ -0.89
NKRF-204ENST00000542113 PBRM1Q86U86 1689 aa9.5□□□□□ -0.89
NKRF-204ENST00000542113 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
NKRF-204ENST00000542113 EPRSP07814 1512 aaKnown RBP9.49□□□□□ -0.89
NKRF-204ENST00000542113 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
NKRF-204ENST00000542113 WDR62O43379 1518 aa9.47□□□□□ -0.89
NKRF-204ENST00000542113 ROCK1Q13464 1354 aa9.47□□□□□ -0.89
NKRF-204ENST00000542113 MRC2Q9UBG0 1479 aa9.46□□□□□ -0.89
NKRF-204ENST00000542113 MAGI3Q5TCQ9 1506 aa9.46□□□□□ -0.89
NKRF-204ENST00000542113 FKBP8Q14318 412 aa9.46□□□□□ -0.9
NKRF-204ENST00000542113 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.9
NKRF-204ENST00000542113 KDM5BQ9UGL1 1544 aa9.45□□□□□ -0.9
NKRF-204ENST00000542113 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
NKRF-204ENST00000542113 TRIM52Q96A61 297 aa9.44□□□□□ -0.9
NKRF-204ENST00000542113 CDK11AQ9UQ88 783 aaPredicted RBP9.44□□□□□ -0.9
NKRF-204ENST00000542113 IFT140Q96RY7 1462 aa9.44□□□□□ -0.9
NKRF-204ENST00000542113 RRP7BPQ9NSQ0 103 aa9.43□□□□□ -0.9
NKRF-204ENST00000542113 HIRIP3Q9BW71 556 aaPredicted RBP9.43□□□□□ -0.9
NKRF-204ENST00000542113 KIAA0586Q9BVV6 1533 aa9.42□□□□□ -0.9
NKRF-204ENST00000542113 MPHOSPH9Q99550 1183 aa9.41□□□□□ -0.9
NKRF-204ENST00000542113 CDK13Q14004 1512 aaKnown RBP9.41□□□□□ -0.9
NKRF-204ENST00000542113 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
NKRF-204ENST00000542113 ERICH6BQ5W0A0 696 aa9.41□□□□□ -0.9
NKRF-204ENST00000542113 DAPK1P53355 1430 aa9.41□□□□□ -0.9
NKRF-204ENST00000542113 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
NKRF-204ENST00000542113 KIAA0556O60303 1618 aa9.41□□□□□ -0.9
NKRF-204ENST00000542113 HSPA5P11021 654 aaKnown RBP9.4□□□□□ -0.9
NKRF-204ENST00000542113 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
NKRF-204ENST00000542113 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.9
NKRF-204ENST00000542113 DENND4BO75064 1496 aaPredicted RBP9.39□□□□□ -0.91
NKRF-204ENST00000542113 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
NKRF-204ENST00000542113 BCANQ96GW7 911 aa9.38□□□□□ -0.91
NKRF-204ENST00000542113 WASHC2AQ641Q2 1341 aa9.38□□□□□ -0.91
NKRF-204ENST00000542113 NCOA1Q15788 1441 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms