RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 MIER1Q8N108 512 aa13.66□□□□□ -0.22
THBS3-211ENST00000541990 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
THBS3-211ENST00000541990 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
THBS3-211ENST00000541990 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
THBS3-211ENST00000541990 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
THBS3-211ENST00000541990 KIF21BO75037 1637 aa13.62□□□□□ -0.23
THBS3-211ENST00000541990 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
THBS3-211ENST00000541990 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
THBS3-211ENST00000541990 ARAP1Q96P48 1450 aa13.55□□□□□ -0.24
THBS3-211ENST00000541990 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
THBS3-211ENST00000541990 WDR62O43379 1518 aa13.53□□□□□ -0.24
THBS3-211ENST00000541990 APLP2Q06481 763 aa13.53□□□□□ -0.24
THBS3-211ENST00000541990 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
THBS3-211ENST00000541990 FHOD3Q2V2M9 1422 aa13.51□□□□□ -0.25
THBS3-211ENST00000541990 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
THBS3-211ENST00000541990 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
THBS3-211ENST00000541990 SNAPC4Q5SXM2 1469 aa13.49□□□□□ -0.25
THBS3-211ENST00000541990 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
THBS3-211ENST00000541990 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
THBS3-211ENST00000541990 VPS8Q8N3P4 1428 aa13.47□□□□□ -0.25
THBS3-211ENST00000541990 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
THBS3-211ENST00000541990 ITGAEP38570 1179 aa13.45□□□□□ -0.26
THBS3-211ENST00000541990 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
THBS3-211ENST00000541990 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
THBS3-211ENST00000541990 EIF4G3O43432 1585 aaKnown RBP13.43□□□□□ -0.26
THBS3-211ENST00000541990 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
THBS3-211ENST00000541990 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
THBS3-211ENST00000541990 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
THBS3-211ENST00000541990 CUL7Q14999 1698 aa13.35□□□□□ -0.27
THBS3-211ENST00000541990 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
THBS3-211ENST00000541990 JPH4Q96JJ6 628 aa13.33□□□□□ -0.27
THBS3-211ENST00000541990 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
THBS3-211ENST00000541990 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
THBS3-211ENST00000541990 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
THBS3-211ENST00000541990 SYNJ2O15056 1496 aa13.27□□□□□ -0.28
THBS3-211ENST00000541990 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
THBS3-211ENST00000541990 CEP170Q5SW79 1584 aa13.26□□□□□ -0.29
THBS3-211ENST00000541990 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
THBS3-211ENST00000541990 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
THBS3-211ENST00000541990 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
THBS3-211ENST00000541990 KCNH8Q96L42 1107 aa13.23□□□□□ -0.29
THBS3-211ENST00000541990 ANP32EQ9BTT0 268 aa13.23□□□□□ -0.29
THBS3-211ENST00000541990 PHLDB1Q86UU1 1377 aa13.22□□□□□ -0.29
THBS3-211ENST00000541990 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
THBS3-211ENST00000541990 DHX57Q6P158 1386 aaKnown RBP13.21□□□□□ -0.3
THBS3-211ENST00000541990 DISP1Q96F81 1524 aa13.2□□□□□ -0.3
THBS3-211ENST00000541990 BCANQ96GW7 911 aa13.2□□□□□ -0.3
THBS3-211ENST00000541990 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
THBS3-211ENST00000541990 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
THBS3-211ENST00000541990 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
THBS3-211ENST00000541990 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
THBS3-211ENST00000541990 PRG4Q92954 1404 aaPredicted RBP13.18□□□□□ -0.3
THBS3-211ENST00000541990 BCL11AQ9H165 835 aa13.18□□□□□ -0.3
THBS3-211ENST00000541990 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
THBS3-211ENST00000541990 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
THBS3-211ENST00000541990 NUP160Q12769 1436 aa13.16□□□□□ -0.3
THBS3-211ENST00000541990 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
THBS3-211ENST00000541990 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
THBS3-211ENST00000541990 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
THBS3-211ENST00000541990 SAMD9Q5K651 1589 aa13.15□□□□□ -0.3
THBS3-211ENST00000541990 CHIC2Q9UKJ5 165 aa13.15□□□□□ -0.3
THBS3-211ENST00000541990 EFCAB5A4FU69 1503 aa13.15□□□□□ -0.31
THBS3-211ENST00000541990 CHD1O14646 1710 aa13.13□□□□□ -0.31
THBS3-211ENST00000541990 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
THBS3-211ENST00000541990 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
THBS3-211ENST00000541990 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
THBS3-211ENST00000541990 MAGI3Q5TCQ9 1506 aa13.11□□□□□ -0.31
THBS3-211ENST00000541990 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
THBS3-211ENST00000541990 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
THBS3-211ENST00000541990 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
THBS3-211ENST00000541990 LRRIQ1Q96JM4 1722 aa13.09□□□□□ -0.31
THBS3-211ENST00000541990 PTPRGP23470 1445 aa13.09□□□□□ -0.31
THBS3-211ENST00000541990 CARMIL2Q6F5E8 1435 aa13.08□□□□□ -0.32
THBS3-211ENST00000541990 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.32
THBS3-211ENST00000541990 NUP153P49790 1475 aaKnown RBP13.07□□□□□ -0.32
THBS3-211ENST00000541990 FKBP8Q14318 412 aa13.06□□□□□ -0.32
THBS3-211ENST00000541990 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
THBS3-211ENST00000541990 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
THBS3-211ENST00000541990 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
THBS3-211ENST00000541990 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
THBS3-211ENST00000541990 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
THBS3-211ENST00000541990 PTPRKQ15262 1439 aa13□□□□□ -0.33
THBS3-211ENST00000541990 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
THBS3-211ENST00000541990 ATP10BO94823 1461 aa12.98□□□□□ -0.33
THBS3-211ENST00000541990 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
THBS3-211ENST00000541990 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
THBS3-211ENST00000541990 CFAP43Q8NDM7 1665 aa12.97□□□□□ -0.33
THBS3-211ENST00000541990 RAPGEF6Q8TEU7 1601 aa12.97□□□□□ -0.33
THBS3-211ENST00000541990 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
THBS3-211ENST00000541990 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
THBS3-211ENST00000541990 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.33
THBS3-211ENST00000541990 HECW1Q76N89 1606 aa12.96□□□□□ -0.33
THBS3-211ENST00000541990 RAB3GAP2Q9H2M9 1393 aa12.95□□□□□ -0.34
THBS3-211ENST00000541990 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
THBS3-211ENST00000541990 HIRIP3Q9BW71 556 aaPredicted RBP12.95□□□□□ -0.34
THBS3-211ENST00000541990 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
THBS3-211ENST00000541990 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
THBS3-211ENST00000541990 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
THBS3-211ENST00000541990 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
THBS3-211ENST00000541990 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms