RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
LMO3-226ENST00000541589 SOGA1O94964 1423 aa14.3□□□□□ -0.12
LMO3-226ENST00000541589 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
LMO3-226ENST00000541589 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
LMO3-226ENST00000541589 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
LMO3-226ENST00000541589 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
LMO3-226ENST00000541589 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.12
LMO3-226ENST00000541589 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
LMO3-226ENST00000541589 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
LMO3-226ENST00000541589 GRIN2BQ13224 1484 aa14.23□□□□□ -0.13
LMO3-226ENST00000541589 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
LMO3-226ENST00000541589 CUX1P39880 1505 aa14.14□□□□□ -0.15
LMO3-226ENST00000541589 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
LMO3-226ENST00000541589 PBRM1Q86U86 1689 aa14.09□□□□□ -0.15
LMO3-226ENST00000541589 CEP170Q5SW79 1584 aa14.06□□□□□ -0.16
LMO3-226ENST00000541589 NUP160Q12769 1436 aa14.05□□□□□ -0.16
LMO3-226ENST00000541589 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
LMO3-226ENST00000541589 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
LMO3-226ENST00000541589 KIF13AQ9H1H9 1805 aa14.05□□□□□ -0.16
LMO3-226ENST00000541589 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
LMO3-226ENST00000541589 ILDR1Q86SU0 546 aaPredicted RBP14.02□□□□□ -0.16
LMO3-226ENST00000541589 SHROOM2Q13796 1616 aa14.02□□□□□ -0.17
LMO3-226ENST00000541589 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
LMO3-226ENST00000541589 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
LMO3-226ENST00000541589 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
LMO3-226ENST00000541589 ADAMTS12P58397 1594 aa13.97□□□□□ -0.17
LMO3-226ENST00000541589 ABCC10Q5T3U5 1492 aa13.97□□□□□ -0.17
LMO3-226ENST00000541589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
LMO3-226ENST00000541589 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
LMO3-226ENST00000541589 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
LMO3-226ENST00000541589 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
LMO3-226ENST00000541589 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
LMO3-226ENST00000541589 ZBTB22O15209 634 aa13.93□□□□□ -0.18
LMO3-226ENST00000541589 CAPN15O75808 1086 aa13.92□□□□□ -0.18
LMO3-226ENST00000541589 PRG4Q92954 1404 aaPredicted RBP13.91□□□□□ -0.18
LMO3-226ENST00000541589 MAPKBP1O60336 1514 aa13.9□□□□□ -0.18
LMO3-226ENST00000541589 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
LMO3-226ENST00000541589 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
LMO3-226ENST00000541589 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
LMO3-226ENST00000541589 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
LMO3-226ENST00000541589 APLP2Q06481 763 aa13.87□□□□□ -0.19
LMO3-226ENST00000541589 KDM6BO15054 1643 aa13.86□□□□□ -0.19
LMO3-226ENST00000541589 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
LMO3-226ENST00000541589 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
LMO3-226ENST00000541589 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
LMO3-226ENST00000541589 DSG3P32926 999 aa13.81□□□□□ -0.2
LMO3-226ENST00000541589 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
LMO3-226ENST00000541589 TOP2BQ02880 1626 aa13.77□□□□□ -0.2
LMO3-226ENST00000541589 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.2
LMO3-226ENST00000541589 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
LMO3-226ENST00000541589 TSPOAP1O95153 1857 aa13.74□□□□□ -0.21
LMO3-226ENST00000541589 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
LMO3-226ENST00000541589 KIAA0586Q9BVV6 1533 aa13.69□□□□□ -0.22
LMO3-226ENST00000541589 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
LMO3-226ENST00000541589 PPRC1Q5VV67 1664 aaKnown RBP13.67□□□□□ -0.22
LMO3-226ENST00000541589 GLI2P10070 1586 aa13.66□□□□□ -0.22
LMO3-226ENST00000541589 COL17A1Q9UMD9 1497 aaPredicted RBP13.66□□□□□ -0.22
LMO3-226ENST00000541589 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
LMO3-226ENST00000541589 ABCB7O75027 752 aa13.64□□□□□ -0.23
LMO3-226ENST00000541589 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
LMO3-226ENST00000541589 PTPRGP23470 1445 aa13.64□□□□□ -0.23
LMO3-226ENST00000541589 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
LMO3-226ENST00000541589 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
LMO3-226ENST00000541589 IGF1RP08069 1367 aa13.59□□□□□ -0.23
LMO3-226ENST00000541589 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
LMO3-226ENST00000541589 UHRF1BP1LA0JNW5 1464 aa13.58□□□□□ -0.24
LMO3-226ENST00000541589 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
LMO3-226ENST00000541589 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
LMO3-226ENST00000541589 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
LMO3-226ENST00000541589 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
LMO3-226ENST00000541589 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
LMO3-226ENST00000541589 CARMIL2Q6F5E8 1435 aa13.53□□□□□ -0.24
LMO3-226ENST00000541589 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
LMO3-226ENST00000541589 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
LMO3-226ENST00000541589 CUL7Q14999 1698 aa13.52□□□□□ -0.24
LMO3-226ENST00000541589 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.25
LMO3-226ENST00000541589 KDM5BQ9UGL1 1544 aa13.51□□□□□ -0.25
LMO3-226ENST00000541589 POLA2Q14181 598 aa13.5□□□□□ -0.25
LMO3-226ENST00000541589 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
LMO3-226ENST00000541589 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
LMO3-226ENST00000541589 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
LMO3-226ENST00000541589 CARMIL1Q5VZK9 1371 aa13.47□□□□□ -0.25
LMO3-226ENST00000541589 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
LMO3-226ENST00000541589 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
LMO3-226ENST00000541589 ZCCHC11Q5TAX3 1644 aaKnown RBP13.44□□□□□ -0.26
LMO3-226ENST00000541589 MAGI3Q5TCQ9 1506 aa13.42□□□□□ -0.26
LMO3-226ENST00000541589 WDR7Q9Y4E6 1490 aa13.42□□□□□ -0.26
LMO3-226ENST00000541589 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
LMO3-226ENST00000541589 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
LMO3-226ENST00000541589 KIF21BO75037 1637 aa13.36□□□□□ -0.27
LMO3-226ENST00000541589 PTPRMP28827 1452 aa13.35□□□□□ -0.27
LMO3-226ENST00000541589 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
LMO3-226ENST00000541589 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
LMO3-226ENST00000541589 ADAMTSL3P82987 1691 aa13.33□□□□□ -0.28
LMO3-226ENST00000541589 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
LMO3-226ENST00000541589 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
LMO3-226ENST00000541589 LMTK3Q96Q04 1460 aa13.32□□□□□ -0.28
LMO3-226ENST00000541589 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
LMO3-226ENST00000541589 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
LMO3-226ENST00000541589 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms