RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 CLIP1P30622 1438 aa15.68■□□□□ 0.1
PHACTR3-209ENST00000541461 IGF1RP08069 1367 aa15.68■□□□□ 0.1
PHACTR3-209ENST00000541461 KIF21BO75037 1637 aa15.67■□□□□ 0.1
PHACTR3-209ENST00000541461 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
PHACTR3-209ENST00000541461 EIF4G3O43432 1585 aaKnown RBP15.64■□□□□ 0.09
PHACTR3-209ENST00000541461 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
PHACTR3-209ENST00000541461 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
PHACTR3-209ENST00000541461 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
PHACTR3-209ENST00000541461 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
PHACTR3-209ENST00000541461 APLP2Q06481 763 aa15.6■□□□□ 0.09
PHACTR3-209ENST00000541461 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
PHACTR3-209ENST00000541461 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
PHACTR3-209ENST00000541461 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
PHACTR3-209ENST00000541461 PRXQ9BXM0 1461 aa15.58■□□□□ 0.08
PHACTR3-209ENST00000541461 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
PHACTR3-209ENST00000541461 FBLN2P98095 1184 aa15.52■□□□□ 0.07
PHACTR3-209ENST00000541461 MAGI1Q96QZ7 1491 aaPredicted RBP15.51■□□□□ 0.07
PHACTR3-209ENST00000541461 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
PHACTR3-209ENST00000541461 CUL7Q14999 1698 aa15.5■□□□□ 0.07
PHACTR3-209ENST00000541461 CHMP7Q8WUX9 453 aaPredicted RBP15.49■□□□□ 0.07
PHACTR3-209ENST00000541461 ADAMTS12P58397 1594 aa15.48■□□□□ 0.07
PHACTR3-209ENST00000541461 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
PHACTR3-209ENST00000541461 DHX57Q6P158 1386 aaKnown RBP15.43■□□□□ 0.06
PHACTR3-209ENST00000541461 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
PHACTR3-209ENST00000541461 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
PHACTR3-209ENST00000541461 ARAP1Q96P48 1450 aa15.4■□□□□ 0.06
PHACTR3-209ENST00000541461 MYT1Q01538 1121 aa15.39■□□□□ 0.05
PHACTR3-209ENST00000541461 CLSPNQ9HAW4 1339 aa15.39■□□□□ 0.05
PHACTR3-209ENST00000541461 CHD1O14646 1710 aa15.36■□□□□ 0.05
PHACTR3-209ENST00000541461 P3H3Q8IVL6 736 aa15.34■□□□□ 0.05
PHACTR3-209ENST00000541461 CTTNBP2Q8WZ74 1663 aa15.34■□□□□ 0.05
PHACTR3-209ENST00000541461 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
PHACTR3-209ENST00000541461 NUP160Q12769 1436 aa15.32■□□□□ 0.04
PHACTR3-209ENST00000541461 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
PHACTR3-209ENST00000541461 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
PHACTR3-209ENST00000541461 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
PHACTR3-209ENST00000541461 ITGAEP38570 1179 aa15.26■□□□□ 0.03
PHACTR3-209ENST00000541461 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
PHACTR3-209ENST00000541461 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
PHACTR3-209ENST00000541461 IQGAP2Q13576 1575 aa15.25■□□□□ 0.03
PHACTR3-209ENST00000541461 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
PHACTR3-209ENST00000541461 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
PHACTR3-209ENST00000541461 FHOD3Q2V2M9 1422 aa15.22■□□□□ 0.03
PHACTR3-209ENST00000541461 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
PHACTR3-209ENST00000541461 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
PHACTR3-209ENST00000541461 KCNH8Q96L42 1107 aa15.16■□□□□ 0.02
PHACTR3-209ENST00000541461 RAB3GAP2Q9H2M9 1393 aa15.16■□□□□ 0.02
PHACTR3-209ENST00000541461 PRG4Q92954 1404 aaPredicted RBP15.15■□□□□ 0.02
PHACTR3-209ENST00000541461 SAMD9Q5K651 1589 aa15.15■□□□□ 0.02
PHACTR3-209ENST00000541461 DISP1Q96F81 1524 aa15.14■□□□□ 0.01
PHACTR3-209ENST00000541461 ATP1B4Q9UN42 357 aaPredicted RBP15.14■□□□□ 0.01
PHACTR3-209ENST00000541461 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
PHACTR3-209ENST00000541461 MAPKBP1O60336 1514 aa15.13■□□□□ 0.01
PHACTR3-209ENST00000541461 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
PHACTR3-209ENST00000541461 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
PHACTR3-209ENST00000541461 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
PHACTR3-209ENST00000541461 KIAA0556O60303 1618 aa15.11■□□□□ 0.01
PHACTR3-209ENST00000541461 TIAM1Q13009 1591 aa15.09■□□□□ 0.01
PHACTR3-209ENST00000541461 ARID3CA6NKF2 412 aa15.08■□□□□ 0
PHACTR3-209ENST00000541461 TSHZ2Q9NRE2 1034 aa15.08■□□□□ 0
PHACTR3-209ENST00000541461 SIN3AQ96ST3 1273 aa15.07■□□□□ 0
PHACTR3-209ENST00000541461 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
PHACTR3-209ENST00000541461 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
PHACTR3-209ENST00000541461 DDX10Q13206 875 aaKnown RBP15.05■□□□□ -0
PHACTR3-209ENST00000541461 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
PHACTR3-209ENST00000541461 FAM50AQ14320 339 aaKnown RBP15.04■□□□□ -0
PHACTR3-209ENST00000541461 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
PHACTR3-209ENST00000541461 MAP3K1Q13233 1512 aa15.03■□□□□ -0
PHACTR3-209ENST00000541461 FMN1Q68DA7 1419 aa15.03■□□□□ -0
PHACTR3-209ENST00000541461 PTPRGP23470 1445 aa15.02■□□□□ -0
PHACTR3-209ENST00000541461 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
PHACTR3-209ENST00000541461 BCANQ96GW7 911 aa15□□□□□ -0.01
PHACTR3-209ENST00000541461 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
PHACTR3-209ENST00000541461 HIRIP3Q9BW71 556 aaPredicted RBP14.98□□□□□ -0.01
PHACTR3-209ENST00000541461 CASKIN1Q8WXD9 1431 aa14.98□□□□□ -0.01
PHACTR3-209ENST00000541461 LRRIQ1Q96JM4 1722 aa14.97□□□□□ -0.01
PHACTR3-209ENST00000541461 PPP1R15AO75807 674 aaPredicted RBP14.97□□□□□ -0.01
PHACTR3-209ENST00000541461 FKBP8Q14318 412 aa14.95□□□□□ -0.02
PHACTR3-209ENST00000541461 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
PHACTR3-209ENST00000541461 PRKCSHP14314 528 aaPredicted RBP14.94□□□□□ -0.02
PHACTR3-209ENST00000541461 CFAP43Q8NDM7 1665 aa14.94□□□□□ -0.02
PHACTR3-209ENST00000541461 RAPGEF6Q8TEU7 1601 aa14.93□□□□□ -0.02
PHACTR3-209ENST00000541461 CDK13Q14004 1512 aaKnown RBP14.93□□□□□ -0.02
PHACTR3-209ENST00000541461 NUP153P49790 1475 aaKnown RBP14.92□□□□□ -0.02
PHACTR3-209ENST00000541461 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
PHACTR3-209ENST00000541461 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
PHACTR3-209ENST00000541461 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
PHACTR3-209ENST00000541461 CYB5RLQ6IPT4 315 aa14.92□□□□□ -0.02
PHACTR3-209ENST00000541461 UACAQ9BZF9 1416 aa14.92□□□□□ -0.02
PHACTR3-209ENST00000541461 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
PHACTR3-209ENST00000541461 ABCA8O94911 1581 aa14.9□□□□□ -0.02
PHACTR3-209ENST00000541461 HECW1Q76N89 1606 aa14.9□□□□□ -0.02
PHACTR3-209ENST00000541461 EPRSP07814 1512 aaKnown RBP14.89□□□□□ -0.03
PHACTR3-209ENST00000541461 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
PHACTR3-209ENST00000541461 ANP32EQ9BTT0 268 aa14.87□□□□□ -0.03
PHACTR3-209ENST00000541461 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
PHACTR3-209ENST00000541461 ANP32CO43423 234 aa14.86□□□□□ -0.03
PHACTR3-209ENST00000541461 ABCC2Q92887 1545 aa14.86□□□□□ -0.03
PHACTR3-209ENST00000541461 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
PHACTR3-209ENST00000541461 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms