RNA–Protein interactions for RNA: ENST00000541364.5

TUBA1C-202, Transcript of tubulin alpha 1c, humanhuman

TSL 2 BASIC

Gene TUBA1C, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-202ENST00000541364 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
TUBA1C-202ENST00000541364 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
TUBA1C-202ENST00000541364 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
TUBA1C-202ENST00000541364 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
TUBA1C-202ENST00000541364 KIF21BO75037 1637 aa15.44■□□□□ 0.06
TUBA1C-202ENST00000541364 ZNF316A6NFI3 1004 aaPredicted RBP15.44■□□□□ 0.06
TUBA1C-202ENST00000541364 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
TUBA1C-202ENST00000541364 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
TUBA1C-202ENST00000541364 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
TUBA1C-202ENST00000541364 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
TUBA1C-202ENST00000541364 ADAMTS12P58397 1594 aa15.39■□□□□ 0.05
TUBA1C-202ENST00000541364 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
TUBA1C-202ENST00000541364 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
TUBA1C-202ENST00000541364 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
TUBA1C-202ENST00000541364 CHD1O14646 1710 aa15.37■□□□□ 0.05
TUBA1C-202ENST00000541364 SYNJ2O15056 1496 aa15.36■□□□□ 0.05
TUBA1C-202ENST00000541364 RANGAP1P46060 587 aaPredicted RBP15.35■□□□□ 0.05
TUBA1C-202ENST00000541364 UBTFP17480 764 aaKnown RBP15.35■□□□□ 0.05
TUBA1C-202ENST00000541364 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
TUBA1C-202ENST00000541364 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
TUBA1C-202ENST00000541364 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
TUBA1C-202ENST00000541364 CUL7Q14999 1698 aa15.32■□□□□ 0.04
TUBA1C-202ENST00000541364 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
TUBA1C-202ENST00000541364 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.04
TUBA1C-202ENST00000541364 CLIP1P30622 1438 aa15.27■□□□□ 0.03
TUBA1C-202ENST00000541364 CEP170Q5SW79 1584 aa15.27■□□□□ 0.03
TUBA1C-202ENST00000541364 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
TUBA1C-202ENST00000541364 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
TUBA1C-202ENST00000541364 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
TUBA1C-202ENST00000541364 NUP160Q12769 1436 aa15.2■□□□□ 0.02
TUBA1C-202ENST00000541364 APLP2Q06481 763 aa15.19■□□□□ 0.02
TUBA1C-202ENST00000541364 P3H3Q8IVL6 736 aa15.19■□□□□ 0.02
TUBA1C-202ENST00000541364 JPH4Q96JJ6 628 aa15.16■□□□□ 0.02
TUBA1C-202ENST00000541364 ARHGEF11O15085 1522 aa15.15■□□□□ 0.02
TUBA1C-202ENST00000541364 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
TUBA1C-202ENST00000541364 KIAA0586Q9BVV6 1533 aa15.14■□□□□ 0.01
TUBA1C-202ENST00000541364 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
TUBA1C-202ENST00000541364 MIER1Q8N108 512 aa15.12■□□□□ 0.01
TUBA1C-202ENST00000541364 ERCC6L2Q5T890 1561 aa15.12■□□□□ 0.01
TUBA1C-202ENST00000541364 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
TUBA1C-202ENST00000541364 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
TUBA1C-202ENST00000541364 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
TUBA1C-202ENST00000541364 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
TUBA1C-202ENST00000541364 PRG4Q92954 1404 aaPredicted RBP15.1■□□□□ 0.01
TUBA1C-202ENST00000541364 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
TUBA1C-202ENST00000541364 DISP1Q96F81 1524 aa15.03■□□□□ -0
TUBA1C-202ENST00000541364 SHROOM2Q13796 1616 aa15.02■□□□□ -0
TUBA1C-202ENST00000541364 FHOD3Q2V2M9 1422 aa15.02□□□□□ -0.01
TUBA1C-202ENST00000541364 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
TUBA1C-202ENST00000541364 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
TUBA1C-202ENST00000541364 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
TUBA1C-202ENST00000541364 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
TUBA1C-202ENST00000541364 ARID3CA6NKF2 412 aa14.99□□□□□ -0.01
TUBA1C-202ENST00000541364 ARHGAP35Q9NRY4 1499 aa14.98□□□□□ -0.01
TUBA1C-202ENST00000541364 CARMIL2Q6F5E8 1435 aa14.98□□□□□ -0.01
TUBA1C-202ENST00000541364 KIAA0556O60303 1618 aa14.97□□□□□ -0.01
TUBA1C-202ENST00000541364 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
TUBA1C-202ENST00000541364 ATP1B4Q9UN42 357 aaPredicted RBP14.96□□□□□ -0.01
TUBA1C-202ENST00000541364 SAMD9Q5K651 1589 aa14.94□□□□□ -0.02
TUBA1C-202ENST00000541364 PTPRGP23470 1445 aa14.94□□□□□ -0.02
TUBA1C-202ENST00000541364 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
TUBA1C-202ENST00000541364 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
TUBA1C-202ENST00000541364 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
TUBA1C-202ENST00000541364 CCNB3Q8WWL7 1395 aa14.86□□□□□ -0.03
TUBA1C-202ENST00000541364 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.04
TUBA1C-202ENST00000541364 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
TUBA1C-202ENST00000541364 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
TUBA1C-202ENST00000541364 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
TUBA1C-202ENST00000541364 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
TUBA1C-202ENST00000541364 FMN1Q68DA7 1419 aa14.79□□□□□ -0.04
TUBA1C-202ENST00000541364 ABCA8O94911 1581 aa14.78□□□□□ -0.04
TUBA1C-202ENST00000541364 TIMELESSQ9UNS1 1208 aa14.77□□□□□ -0.04
TUBA1C-202ENST00000541364 TIAM1Q13009 1591 aa14.77□□□□□ -0.04
TUBA1C-202ENST00000541364 RAPGEF6Q8TEU7 1601 aa14.77□□□□□ -0.05
TUBA1C-202ENST00000541364 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
TUBA1C-202ENST00000541364 NUP153P49790 1475 aaKnown RBP14.75□□□□□ -0.05
TUBA1C-202ENST00000541364 CDK13Q14004 1512 aaKnown RBP14.75□□□□□ -0.05
TUBA1C-202ENST00000541364 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
TUBA1C-202ENST00000541364 MAPKBP1O60336 1514 aa14.73□□□□□ -0.05
TUBA1C-202ENST00000541364 ATP10BO94823 1461 aa14.73□□□□□ -0.05
TUBA1C-202ENST00000541364 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
TUBA1C-202ENST00000541364 SETD5Q9C0A6 1442 aa14.72□□□□□ -0.05
TUBA1C-202ENST00000541364 KCNH8Q96L42 1107 aa14.71□□□□□ -0.05
TUBA1C-202ENST00000541364 RAB3GAP2Q9H2M9 1393 aa14.71□□□□□ -0.05
TUBA1C-202ENST00000541364 LRRIQ1Q96JM4 1722 aa14.71□□□□□ -0.06
TUBA1C-202ENST00000541364 CFAP43Q8NDM7 1665 aa14.71□□□□□ -0.06
TUBA1C-202ENST00000541364 UHRF1BP1LA0JNW5 1464 aa14.7□□□□□ -0.06
TUBA1C-202ENST00000541364 EPRSP07814 1512 aaKnown RBP14.69□□□□□ -0.06
TUBA1C-202ENST00000541364 ZCCHC11Q5TAX3 1644 aaKnown RBP14.69□□□□□ -0.06
TUBA1C-202ENST00000541364 HECW1Q76N89 1606 aa14.69□□□□□ -0.06
TUBA1C-202ENST00000541364 FYCO1Q9BQS8 1478 aa14.69□□□□□ -0.06
TUBA1C-202ENST00000541364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.68□□□□□ -0.063e-8■■■□□ 15.6
TUBA1C-202ENST00000541364 LRRC9Q6ZRR7 1453 aa14.68□□□□□ -0.06
TUBA1C-202ENST00000541364 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
TUBA1C-202ENST00000541364 TSHZ2Q9NRE2 1034 aa14.65□□□□□ -0.06
TUBA1C-202ENST00000541364 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
TUBA1C-202ENST00000541364 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
TUBA1C-202ENST00000541364 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
TUBA1C-202ENST00000541364 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
TUBA1C-202ENST00000541364 FAM69CQ0P6D2 419 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms