RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 NEFLP07196 543 aa13.19□□□□□ -0.3
TCF4-207ENST00000540999 KIF21BO75037 1637 aa13.18□□□□□ -0.3
TCF4-207ENST00000540999 TNIKQ9UKE5 1360 aa13.17□□□□□ -0.3
TCF4-207ENST00000540999 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
TCF4-207ENST00000540999 CEP162Q5TB80 1403 aa13.16□□□□□ -0.3
TCF4-207ENST00000540999 KCNA4P22459 653 aa13.16□□□□□ -0.3
TCF4-207ENST00000540999 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
TCF4-207ENST00000540999 IGF1RP08069 1367 aa13.14□□□□□ -0.31
TCF4-207ENST00000540999 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
TCF4-207ENST00000540999 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
TCF4-207ENST00000540999 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
TCF4-207ENST00000540999 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
TCF4-207ENST00000540999 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
TCF4-207ENST00000540999 PCGF6Q9BYE7 350 aa13.09□□□□□ -0.31
TCF4-207ENST00000540999 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
TCF4-207ENST00000540999 WDR97A6NE52 1622 aa13.07□□□□□ -0.32
TCF4-207ENST00000540999 CARMIL1Q5VZK9 1371 aa13.06□□□□□ -0.32
TCF4-207ENST00000540999 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
TCF4-207ENST00000540999 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
TCF4-207ENST00000540999 CLIP1P30622 1438 aa13.04□□□□□ -0.32
TCF4-207ENST00000540999 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
TCF4-207ENST00000540999 WDR62O43379 1518 aa13.02□□□□□ -0.32
TCF4-207ENST00000540999 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.33
TCF4-207ENST00000540999 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
TCF4-207ENST00000540999 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
TCF4-207ENST00000540999 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
TCF4-207ENST00000540999 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
TCF4-207ENST00000540999 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
TCF4-207ENST00000540999 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
TCF4-207ENST00000540999 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
TCF4-207ENST00000540999 CHMP4AQ9BY43 222 aa12.97□□□□□ -0.33
TCF4-207ENST00000540999 FGD1P98174 961 aa12.95□□□□□ -0.34
TCF4-207ENST00000540999 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
TCF4-207ENST00000540999 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
TCF4-207ENST00000540999 CUL7Q14999 1698 aa12.94□□□□□ -0.34
TCF4-207ENST00000540999 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
TCF4-207ENST00000540999 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
TCF4-207ENST00000540999 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
TCF4-207ENST00000540999 ARAP1Q96P48 1450 aa12.92□□□□□ -0.34
TCF4-207ENST00000540999 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
TCF4-207ENST00000540999 ARHGAP35Q9NRY4 1499 aa12.9□□□□□ -0.34
TCF4-207ENST00000540999 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
TCF4-207ENST00000540999 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
TCF4-207ENST00000540999 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
TCF4-207ENST00000540999 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
TCF4-207ENST00000540999 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
TCF4-207ENST00000540999 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
TCF4-207ENST00000540999 BCANQ96GW7 911 aa12.86□□□□□ -0.35
TCF4-207ENST00000540999 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
TCF4-207ENST00000540999 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
TCF4-207ENST00000540999 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
TCF4-207ENST00000540999 BRD2P25440 801 aaKnown RBP12.83□□□□□ -0.35
TCF4-207ENST00000540999 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
TCF4-207ENST00000540999 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
TCF4-207ENST00000540999 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
TCF4-207ENST00000540999 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
TCF4-207ENST00000540999 FBLN2P98095 1184 aa12.79□□□□□ -0.36
TCF4-207ENST00000540999 KANK4Q5T7N3 995 aaPredicted RBP12.78□□□□□ -0.36
TCF4-207ENST00000540999 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
TCF4-207ENST00000540999 ERICH6BQ5W0A0 696 aa12.76□□□□□ -0.37
TCF4-207ENST00000540999 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
TCF4-207ENST00000540999 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
TCF4-207ENST00000540999 CHMP7Q8WUX9 453 aaPredicted RBP12.75□□□□□ -0.37
TCF4-207ENST00000540999 GRIN2AQ12879 1464 aa12.74□□□□□ -0.37
TCF4-207ENST00000540999 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
TCF4-207ENST00000540999 AAMPQ13685 434 aa12.72□□□□□ -0.37
TCF4-207ENST00000540999 IQGAP2Q13576 1575 aa12.71□□□□□ -0.37
TCF4-207ENST00000540999 EFCAB5A4FU69 1503 aa12.71□□□□□ -0.37
TCF4-207ENST00000540999 PCF11O94913 1555 aaKnown RBP12.71□□□□□ -0.37
TCF4-207ENST00000540999 SYNJ2O15056 1496 aa12.71□□□□□ -0.38
TCF4-207ENST00000540999 SAMD9Q5K651 1589 aa12.71□□□□□ -0.38
TCF4-207ENST00000540999 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
TCF4-207ENST00000540999 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
TCF4-207ENST00000540999 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
TCF4-207ENST00000540999 KIAA0586Q9BVV6 1533 aa12.66□□□□□ -0.38
TCF4-207ENST00000540999 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
TCF4-207ENST00000540999 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.39
TCF4-207ENST00000540999 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
TCF4-207ENST00000540999 CASKIN1Q8WXD9 1431 aa12.64□□□□□ -0.39
TCF4-207ENST00000540999 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
TCF4-207ENST00000540999 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
TCF4-207ENST00000540999 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
TCF4-207ENST00000540999 CLSPNQ9HAW4 1339 aa12.63□□□□□ -0.39
TCF4-207ENST00000540999 DISP1Q96F81 1524 aa12.62□□□□□ -0.39
TCF4-207ENST00000540999 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
TCF4-207ENST00000540999 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
TCF4-207ENST00000540999 NUP160Q12769 1436 aa12.62□□□□□ -0.39
TCF4-207ENST00000540999 CDK11BP21127 795 aaKnown RBP12.62□□□□□ -0.39
TCF4-207ENST00000540999 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
TCF4-207ENST00000540999 CDK11AQ9UQ88 783 aaPredicted RBP12.62□□□□□ -0.39
TCF4-207ENST00000540999 CHD1O14646 1710 aa12.61□□□□□ -0.39
TCF4-207ENST00000540999 TMEM132AQ24JP5 1023 aa12.61□□□□□ -0.39
TCF4-207ENST00000540999 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
TCF4-207ENST00000540999 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
TCF4-207ENST00000540999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
TCF4-207ENST00000540999 JPH4Q96JJ6 628 aa12.6□□□□□ -0.39
TCF4-207ENST00000540999 CFAP43Q8NDM7 1665 aa12.59□□□□□ -0.39
TCF4-207ENST00000540999 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
TCF4-207ENST00000540999 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
TCF4-207ENST00000540999 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms