RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
PHC1-208ENST00000540574 FHOD3Q2V2M9 1422 aa13.92□□□□□ -0.18
PHC1-208ENST00000540574 EIF4G1Q04637 1599 aaKnown RBP13.91□□□□□ -0.18
PHC1-208ENST00000540574 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
PHC1-208ENST00000540574 IRX6P78412 446 aaPredicted RBP13.89□□□□□ -0.19
PHC1-208ENST00000540574 IGF1RP08069 1367 aa13.89□□□□□ -0.19
PHC1-208ENST00000540574 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
PHC1-208ENST00000540574 FOXD1Q16676 465 aa13.88□□□□□ -0.19
PHC1-208ENST00000540574 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
PHC1-208ENST00000540574 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
PHC1-208ENST00000540574 HNRNPUQ00839 825 aaKnown RBP eCLIP13.85□□□□□ -0.19
PHC1-208ENST00000540574 CUX1P39880 1505 aa13.84□□□□□ -0.19
PHC1-208ENST00000540574 FAM9BQ8IZU0 186 aa13.84□□□□□ -0.19
PHC1-208ENST00000540574 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
PHC1-208ENST00000540574 FGD5Q6ZNL6 1462 aa13.83□□□□□ -0.2
PHC1-208ENST00000540574 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
PHC1-208ENST00000540574 CLSPNQ9HAW4 1339 aa13.8□□□□□ -0.2
PHC1-208ENST00000540574 ERICH6Q7L0X2 663 aa13.8□□□□□ -0.2
PHC1-208ENST00000540574 NESP48681 1621 aa13.79□□□□□ -0.2
PHC1-208ENST00000540574 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
PHC1-208ENST00000540574 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
PHC1-208ENST00000540574 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
PHC1-208ENST00000540574 FANCD2Q9BXW9 1451 aa13.79□□□□□ -0.2
PHC1-208ENST00000540574 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
PHC1-208ENST00000540574 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
PHC1-208ENST00000540574 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
PHC1-208ENST00000540574 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
PHC1-208ENST00000540574 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
PHC1-208ENST00000540574 CFTRP13569 1480 aa13.76□□□□□ -0.21
PHC1-208ENST00000540574 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
PHC1-208ENST00000540574 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
PHC1-208ENST00000540574 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
PHC1-208ENST00000540574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
PHC1-208ENST00000540574 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
PHC1-208ENST00000540574 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
PHC1-208ENST00000540574 EIF4G2P78344 907 aaKnown RBP eCLIP13.68□□□□□ -0.22
PHC1-208ENST00000540574 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
PHC1-208ENST00000540574 CFDP1Q9UEE9 299 aaPredicted RBP13.66□□□□□ -0.22
PHC1-208ENST00000540574 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
PHC1-208ENST00000540574 RGL3Q3MIN7 710 aa13.65□□□□□ -0.23
PHC1-208ENST00000540574 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
PHC1-208ENST00000540574 LRRC9Q6ZRR7 1453 aa13.64□□□□□ -0.23
PHC1-208ENST00000540574 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
PHC1-208ENST00000540574 CC2D2AQ9P2K1 1620 aa13.62□□□□□ -0.23
PHC1-208ENST00000540574 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
PHC1-208ENST00000540574 HMGXB3Q12766 1538 aa13.61□□□□□ -0.23
PHC1-208ENST00000540574 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
PHC1-208ENST00000540574 SENP3Q9H4L4 574 aaPredicted RBP13.6□□□□□ -0.23
PHC1-208ENST00000540574 L3MBTL2Q969R5 705 aa13.6□□□□□ -0.23
PHC1-208ENST00000540574 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
PHC1-208ENST00000540574 TSPY4P0CV99 314 aa13.59□□□□□ -0.23
PHC1-208ENST00000540574 TSPY10P0CW01 314 aa13.59□□□□□ -0.23
PHC1-208ENST00000540574 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
PHC1-208ENST00000540574 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
PHC1-208ENST00000540574 POLA1P09884 1462 aaPredicted RBP13.58□□□□□ -0.24
PHC1-208ENST00000540574 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
PHC1-208ENST00000540574 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
PHC1-208ENST00000540574 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
PHC1-208ENST00000540574 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
PHC1-208ENST00000540574 FGD6Q6ZV73 1430 aa13.53□□□□□ -0.24
PHC1-208ENST00000540574 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
PHC1-208ENST00000540574 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
PHC1-208ENST00000540574 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
PHC1-208ENST00000540574 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
PHC1-208ENST00000540574 PKD2Q13563 968 aa13.51□□□□□ -0.25
PHC1-208ENST00000540574 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
PHC1-208ENST00000540574 TIMELESSQ9UNS1 1208 aa13.5□□□□□ -0.25
PHC1-208ENST00000540574 CARD11Q9BXL7 1154 aa13.49□□□□□ -0.25
PHC1-208ENST00000540574 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
PHC1-208ENST00000540574 B4GALNT3Q6L9W6 998 aa13.48□□□□□ -0.25
PHC1-208ENST00000540574 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
PHC1-208ENST00000540574 PCF11O94913 1555 aaKnown RBP13.47□□□□□ -0.25
PHC1-208ENST00000540574 HNRNPMP52272 730 aaKnown RBP eCLIP13.46□□□□□ -0.25
PHC1-208ENST00000540574 CASKIN1Q8WXD9 1431 aa13.46□□□□□ -0.25
PHC1-208ENST00000540574 CHGAP10645 457 aaKnown RBP13.46□□□□□ -0.25
PHC1-208ENST00000540574 NCOA2Q15596 1464 aa13.46□□□□□ -0.25
PHC1-208ENST00000540574 MYT1Q01538 1121 aa13.46□□□□□ -0.26
PHC1-208ENST00000540574 CCER2I3L3R5 266 aa13.44□□□□□ -0.26
PHC1-208ENST00000540574 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
PHC1-208ENST00000540574 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
PHC1-208ENST00000540574 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
PHC1-208ENST00000540574 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
PHC1-208ENST00000540574 WASHC2AQ641Q2 1341 aa13.4□□□□□ -0.26
PHC1-208ENST00000540574 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
PHC1-208ENST00000540574 NUP155O75694 1391 aa13.39□□□□□ -0.27
PHC1-208ENST00000540574 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
PHC1-208ENST00000540574 CC2D1BQ5T0F9 858 aaKnown RBP13.38□□□□□ -0.27
PHC1-208ENST00000540574 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
PHC1-208ENST00000540574 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
PHC1-208ENST00000540574 URB2Q14146 1524 aaKnown RBP13.38□□□□□ -0.27
PHC1-208ENST00000540574 UACAQ9BZF9 1416 aa13.38□□□□□ -0.27
PHC1-208ENST00000540574 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
PHC1-208ENST00000540574 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
PHC1-208ENST00000540574 NBPF8Q3BBV2 869 aa13.37□□□□□ -0.27
PHC1-208ENST00000540574 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
PHC1-208ENST00000540574 MAPKBP1O60336 1514 aa13.36□□□□□ -0.27
PHC1-208ENST00000540574 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
PHC1-208ENST00000540574 PRDM2Q13029 1718 aa13.34□□□□□ -0.27
PHC1-208ENST00000540574 NAIPQ13075 1403 aa13.34□□□□□ -0.27
PHC1-208ENST00000540574 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms