RNA–Protein interactions for RNA: ENST00000540412.1

NPIPB2-205, Transcript of nuclear pore complex interacting protein family, member B2, humanhuman

TSL 3

Gene NPIPB2, Length 389 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB2-205ENST00000540412 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
NPIPB2-205ENST00000540412 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
NPIPB2-205ENST00000540412 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
NPIPB2-205ENST00000540412 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
NPIPB2-205ENST00000540412 SETD5Q9C0A6 1442 aa9.33□□□□□ -0.92
NPIPB2-205ENST00000540412 CCER2I3L3R5 266 aa9.33□□□□□ -0.92
NPIPB2-205ENST00000540412 CUX1P39880 1505 aa9.31□□□□□ -0.92
NPIPB2-205ENST00000540412 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
NPIPB2-205ENST00000540412 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
NPIPB2-205ENST00000540412 ANP32CO43423 234 aa9.3□□□□□ -0.92
NPIPB2-205ENST00000540412 DDX10Q13206 875 aaKnown RBP9.3□□□□□ -0.92
NPIPB2-205ENST00000540412 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
NPIPB2-205ENST00000540412 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
NPIPB2-205ENST00000540412 ITGAEP38570 1179 aa9.29□□□□□ -0.92
NPIPB2-205ENST00000540412 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
NPIPB2-205ENST00000540412 LRRC9Q6ZRR7 1453 aa9.28□□□□□ -0.92
NPIPB2-205ENST00000540412 MSH5O43196 834 aa9.26□□□□□ -0.93
NPIPB2-205ENST00000540412 TIMELESSQ9UNS1 1208 aa9.26□□□□□ -0.93
NPIPB2-205ENST00000540412 CDK11AQ9UQ88 783 aaPredicted RBP9.26□□□□□ -0.93
NPIPB2-205ENST00000540412 TRIM52Q96A61 297 aa9.24□□□□□ -0.93
NPIPB2-205ENST00000540412 HMGXB3Q12766 1538 aa9.24□□□□□ -0.93
NPIPB2-205ENST00000540412 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
NPIPB2-205ENST00000540412 FHAD1B1AJZ9 1412 aa9.22□□□□□ -0.93
NPIPB2-205ENST00000540412 PTPN23Q9H3S7 1636 aa9.21□□□□□ -0.93
NPIPB2-205ENST00000540412 POLR1AO95602 1720 aaPredicted RBP9.21□□□□□ -0.94
NPIPB2-205ENST00000540412 PHLDB1Q86UU1 1377 aa9.21□□□□□ -0.94
NPIPB2-205ENST00000540412 TONSLQ96HA7 1378 aa9.21□□□□□ -0.94
NPIPB2-205ENST00000540412 ERICH6BQ5W0A0 696 aa9.2□□□□□ -0.94
NPIPB2-205ENST00000540412 SIN3AQ96ST3 1273 aa9.2□□□□□ -0.94
NPIPB2-205ENST00000540412 CCDC18Q5T9S5 1454 aa9.2□□□□□ -0.94
NPIPB2-205ENST00000540412 FYCO1Q9BQS8 1478 aa9.2□□□□□ -0.94
NPIPB2-205ENST00000540412 HECW1Q76N89 1606 aa9.2□□□□□ -0.94
NPIPB2-205ENST00000540412 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
NPIPB2-205ENST00000540412 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
NPIPB2-205ENST00000540412 GCC2Q8IWJ2 1684 aa9.19□□□□□ -0.94
NPIPB2-205ENST00000540412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPIPB2-205ENST00000540412 HNRNPUQ00839 825 aaKnown RBP eCLIP9.17□□□□□ -0.94
NPIPB2-205ENST00000540412 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
NPIPB2-205ENST00000540412 NCOA2Q15596 1464 aa9.16□□□□□ -0.94
NPIPB2-205ENST00000540412 PPP4R2Q9NY27 417 aa9.16□□□□□ -0.94
NPIPB2-205ENST00000540412 KIF21AQ7Z4S6 1674 aa9.16□□□□□ -0.94
NPIPB2-205ENST00000540412 DEKP35659 375 aaKnown RBP9.15□□□□□ -0.94
NPIPB2-205ENST00000540412 IRX6P78412 446 aaPredicted RBP9.15□□□□□ -0.94
NPIPB2-205ENST00000540412 HIRIP3Q9BW71 556 aaPredicted RBP9.15□□□□□ -0.94
NPIPB2-205ENST00000540412 AQRO60306 1485 aaKnown RBP eCLIP9.15□□□□□ -0.95
NPIPB2-205ENST00000540412 UACAQ9BZF9 1416 aa9.14□□□□□ -0.95
NPIPB2-205ENST00000540412 ABCA5Q8WWZ7 1642 aa9.14□□□□□ -0.95
NPIPB2-205ENST00000540412 KDM5BQ9UGL1 1544 aa9.14□□□□□ -0.95
NPIPB2-205ENST00000540412 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
NPIPB2-205ENST00000540412 CNTLNQ9NXG0 1405 aa9.14□□□□□ -0.95
NPIPB2-205ENST00000540412 CUL7Q14999 1698 aa9.13□□□□□ -0.95
NPIPB2-205ENST00000540412 LRRIQ1Q96JM4 1722 aa9.13□□□□□ -0.95
NPIPB2-205ENST00000540412 CC2D2AQ9P2K1 1620 aa9.13□□□□□ -0.95
NPIPB2-205ENST00000540412 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
NPIPB2-205ENST00000540412 CFTRP13569 1480 aa9.12□□□□□ -0.95
NPIPB2-205ENST00000540412 FGD5Q6ZNL6 1462 aa9.12□□□□□ -0.95
NPIPB2-205ENST00000540412 FGD6Q6ZV73 1430 aa9.12□□□□□ -0.95
NPIPB2-205ENST00000540412 CASKIN1Q8WXD9 1431 aa9.12□□□□□ -0.95
NPIPB2-205ENST00000540412 NOP58Q9Y2X3 529 aaKnown RBP9.11□□□□□ -0.95
NPIPB2-205ENST00000540412 HFM1A2PYH4 1435 aa9.11□□□□□ -0.95
NPIPB2-205ENST00000540412 THOC2Q8NI27 1593 aaKnown RBP9.11□□□□□ -0.95
NPIPB2-205ENST00000540412 EHBP1L1Q8N3D4 1523 aa9.1□□□□□ -0.95
NPIPB2-205ENST00000540412 NCAPD3P42695 1498 aa9.08□□□□□ -0.96
NPIPB2-205ENST00000540412 FHOD3Q2V2M9 1422 aa9.08□□□□□ -0.96
NPIPB2-205ENST00000540412 CARMIL1Q5VZK9 1371 aa9.08□□□□□ -0.96
NPIPB2-205ENST00000540412 IGF1RP08069 1367 aa9.07□□□□□ -0.96
NPIPB2-205ENST00000540412 FMN1Q68DA7 1419 aa9.06□□□□□ -0.96
NPIPB2-205ENST00000540412 RTL5Q5HYW3 569 aaPredicted RBP9.06□□□□□ -0.96
NPIPB2-205ENST00000540412 SNAPC4Q5SXM2 1469 aa9.06□□□□□ -0.96
NPIPB2-205ENST00000540412 ZBED9Q6R2W3 1325 aa9.05□□□□□ -0.96
NPIPB2-205ENST00000540412 SAMD9Q5K651 1589 aa9.05□□□□□ -0.96
NPIPB2-205ENST00000540412 NAIPQ13075 1403 aa9.05□□□□□ -0.96
NPIPB2-205ENST00000540412 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
NPIPB2-205ENST00000540412 NBR1Q14596 966 aa9.04□□□□□ -0.96
NPIPB2-205ENST00000540412 B4GALNT3Q6L9W6 998 aa9.04□□□□□ -0.96
NPIPB2-205ENST00000540412 MYOM3Q5VTT5 1437 aa9.04□□□□□ -0.96
NPIPB2-205ENST00000540412 HSPA5P11021 654 aaKnown RBP9.03□□□□□ -0.96
NPIPB2-205ENST00000540412 ATP1B4Q9UN42 357 aaPredicted RBP9.03□□□□□ -0.96
NPIPB2-205ENST00000540412 UGGT2Q9NYU1 1516 aa9.03□□□□□ -0.96
NPIPB2-205ENST00000540412 NCOA1Q15788 1441 aa9.03□□□□□ -0.96
NPIPB2-205ENST00000540412 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
NPIPB2-205ENST00000540412 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
NPIPB2-205ENST00000540412 DNMBPQ6XZF7 1577 aa9.02□□□□□ -0.97
NPIPB2-205ENST00000540412 MTUS2Q5JR59 1369 aa9.01□□□□□ -0.97
NPIPB2-205ENST00000540412 CCDC7Q96M83 1385 aa9.01□□□□□ -0.97
NPIPB2-205ENST00000540412 PTPRKQ15262 1439 aa9.01□□□□□ -0.97
NPIPB2-205ENST00000540412 AKNAQ7Z591 1439 aa9.01□□□□□ -0.97
NPIPB2-205ENST00000540412 EIF4G2P78344 907 aaKnown RBP eCLIP9□□□□□ -0.97
NPIPB2-205ENST00000540412 MRS2Q9HD23 443 aa9□□□□□ -0.97
NPIPB2-205ENST00000540412 KDM6BO15054 1643 aa9□□□□□ -0.97
NPIPB2-205ENST00000540412 GRIN2BQ13224 1484 aa9□□□□□ -0.97
NPIPB2-205ENST00000540412 TCOF1Q13428 1488 aaKnown RBP9□□□□□ -0.97
NPIPB2-205ENST00000540412 ARHGEF11O15085 1522 aa8.99□□□□□ -0.97
NPIPB2-205ENST00000540412 KIF14Q15058 1648 aa8.98□□□□□ -0.97
NPIPB2-205ENST00000540412 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
NPIPB2-205ENST00000540412 P3H3Q8IVL6 736 aa8.98□□□□□ -0.97
NPIPB2-205ENST00000540412 FAM9BQ8IZU0 186 aa8.98□□□□□ -0.97
NPIPB2-205ENST00000540412 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
NPIPB2-205ENST00000540412 ABCA10Q8WWZ4 1543 aa8.97□□□□□ -0.97
NPIPB2-205ENST00000540412 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms