RNA–Protein interactions for RNA: ENST00000540412.1

NPIPB2-205, Transcript of nuclear pore complex interacting protein family, member B2, humanhuman

TSL 3

Gene NPIPB2, Length 389 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB2-205ENST00000540412 NISCHQ9Y2I1 1504 aa12.84□□□□□ -0.35
NPIPB2-205ENST00000540412 AEBP2Q6ZN18 517 aaPredicted RBP11.14□□□□□ -0.63
NPIPB2-205ENST00000540412 HRCP23327 699 aa11.13□□□□□ -0.63
NPIPB2-205ENST00000540412 SHROOM4Q9ULL8 1493 aa11.1□□□□□ -0.63
NPIPB2-205ENST00000540412 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
NPIPB2-205ENST00000540412 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
NPIPB2-205ENST00000540412 CCDC180Q9P1Z9 1646 aa10.96□□□□□ -0.65
NPIPB2-205ENST00000540412 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.65
NPIPB2-205ENST00000540412 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
NPIPB2-205ENST00000540412 CHIC1Q5VXU3 224 aa10.83□□□□□ -0.68
NPIPB2-205ENST00000540412 PCGF6Q9BYE7 350 aa10.83□□□□□ -0.68
NPIPB2-205ENST00000540412 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
NPIPB2-205ENST00000540412 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
NPIPB2-205ENST00000540412 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
NPIPB2-205ENST00000540412 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
NPIPB2-205ENST00000540412 ABCC9O60706 1549 aa10.51□□□□□ -0.73
NPIPB2-205ENST00000540412 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
NPIPB2-205ENST00000540412 SCAF1Q9H7N4 1312 aaKnown RBP10.45□□□□□ -0.74
NPIPB2-205ENST00000540412 MYT1Q01538 1121 aa10.4□□□□□ -0.74
NPIPB2-205ENST00000540412 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
NPIPB2-205ENST00000540412 RB1CC1Q8TDY2 1594 aa10.31□□□□□ -0.76
NPIPB2-205ENST00000540412 ACIN1Q9UKV3 1341 aaKnown RBP10.26□□□□□ -0.77
NPIPB2-205ENST00000540412 SCRIBQ14160 1630 aa10.24□□□□□ -0.77
NPIPB2-205ENST00000540412 RSF1Q96T23 1441 aaPredicted RBP10.22□□□□□ -0.77
NPIPB2-205ENST00000540412 CENPBP07199 599 aaPredicted RBP10.21□□□□□ -0.77
NPIPB2-205ENST00000540412 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
NPIPB2-205ENST00000540412 NEUROD1Q13562 356 aa10.16□□□□□ -0.78
NPIPB2-205ENST00000540412 FAM9AQ8IZU1 332 aaPredicted RBP10.14□□□□□ -0.79
NPIPB2-205ENST00000540412 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
NPIPB2-205ENST00000540412 CCER1Q8TC90 406 aaPredicted RBP10.11□□□□□ -0.79
NPIPB2-205ENST00000540412 EIF4G1Q04637 1599 aaKnown RBP10.1□□□□□ -0.79
NPIPB2-205ENST00000540412 DIEXFQ68CQ4 756 aaKnown RBP10.09□□□□□ -0.79
NPIPB2-205ENST00000540412 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
NPIPB2-205ENST00000540412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.06□□□□□ -0.8
NPIPB2-205ENST00000540412 EHMT2Q96KQ7 1210 aa10.03□□□□□ -0.8
NPIPB2-205ENST00000540412 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
NPIPB2-205ENST00000540412 WIZO95785 1651 aa10.02□□□□□ -0.8
NPIPB2-205ENST00000540412 WRNQ14191 1432 aaPredicted RBP eCLIP10.02□□□□□ -0.81
NPIPB2-205ENST00000540412 MROH2BQ7Z745 1585 aa9.99□□□□□ -0.81
NPIPB2-205ENST00000540412 NACADO15069 1562 aa9.98□□□□□ -0.81
NPIPB2-205ENST00000540412 ZNF316A6NFI3 1004 aaPredicted RBP9.94□□□□□ -0.82
NPIPB2-205ENST00000540412 CECR2Q9BXF3 1484 aa9.93□□□□□ -0.82
NPIPB2-205ENST00000540412 CEP162Q5TB80 1403 aa9.93□□□□□ -0.82
NPIPB2-205ENST00000540412 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
NPIPB2-205ENST00000540412 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
NPIPB2-205ENST00000540412 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
NPIPB2-205ENST00000540412 EEA1Q15075 1411 aa9.87□□□□□ -0.83
NPIPB2-205ENST00000540412 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
NPIPB2-205ENST00000540412 CLSPNQ9HAW4 1339 aa9.84□□□□□ -0.83
NPIPB2-205ENST00000540412 GOLGA3Q08378 1498 aa9.84□□□□□ -0.83
NPIPB2-205ENST00000540412 SMARCA2P51531 1590 aa9.84□□□□□ -0.83
NPIPB2-205ENST00000540412 CCDC88BA6NC98 1476 aa9.83□□□□□ -0.84
NPIPB2-205ENST00000540412 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
NPIPB2-205ENST00000540412 KIF21BO75037 1637 aa9.81□□□□□ -0.84
NPIPB2-205ENST00000540412 SMARCA4P51532 1647 aa9.81□□□□□ -0.84
NPIPB2-205ENST00000540412 MIER1Q8N108 512 aa9.79□□□□□ -0.84
NPIPB2-205ENST00000540412 SOGA1O94964 1423 aa9.75□□□□□ -0.85
NPIPB2-205ENST00000540412 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
NPIPB2-205ENST00000540412 UNC13AQ9UPW8 1703 aa9.7□□□□□ -0.86
NPIPB2-205ENST00000540412 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
NPIPB2-205ENST00000540412 RUSC2Q8N2Y8 1516 aa9.7□□□□□ -0.86
NPIPB2-205ENST00000540412 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
NPIPB2-205ENST00000540412 BAZ1BQ9UIG0 1483 aaKnown RBP9.69□□□□□ -0.86
NPIPB2-205ENST00000540412 CSRNP3Q8WYN3 585 aa9.68□□□□□ -0.86
NPIPB2-205ENST00000540412 SUPT16HQ9Y5B9 1047 aaKnown RBP9.68□□□□□ -0.86
NPIPB2-205ENST00000540412 CLIP1P30622 1438 aa9.67□□□□□ -0.86
NPIPB2-205ENST00000540412 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
NPIPB2-205ENST00000540412 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
NPIPB2-205ENST00000540412 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
NPIPB2-205ENST00000540412 SYNJ1O43426 1573 aa9.66□□□□□ -0.86
NPIPB2-205ENST00000540412 TSHZ2Q9NRE2 1034 aa9.61□□□□□ -0.87
NPIPB2-205ENST00000540412 APLP2Q06481 763 aa9.6□□□□□ -0.87
NPIPB2-205ENST00000540412 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
NPIPB2-205ENST00000540412 BCL11AQ9H165 835 aa9.58□□□□□ -0.88
NPIPB2-205ENST00000540412 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
NPIPB2-205ENST00000540412 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
NPIPB2-205ENST00000540412 SENP3Q9H4L4 574 aaPredicted RBP9.55□□□□□ -0.88
NPIPB2-205ENST00000540412 BIVM-ERCC5R4GMW8 1640 aa9.55□□□□□ -0.88
NPIPB2-205ENST00000540412 RAPGEF2Q9Y4G8 1499 aa9.54□□□□□ -0.88
NPIPB2-205ENST00000540412 CUX2O14529 1486 aa9.53□□□□□ -0.88
NPIPB2-205ENST00000540412 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
NPIPB2-205ENST00000540412 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
NPIPB2-205ENST00000540412 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
NPIPB2-205ENST00000540412 NEFLP07196 543 aa9.46□□□□□ -0.9
NPIPB2-205ENST00000540412 MAPKBP1O60336 1514 aa9.46□□□□□ -0.9
NPIPB2-205ENST00000540412 BCANQ96GW7 911 aa9.45□□□□□ -0.9
NPIPB2-205ENST00000540412 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
NPIPB2-205ENST00000540412 FKBP8Q14318 412 aa9.43□□□□□ -0.9
NPIPB2-205ENST00000540412 PHF23Q9BUL5 403 aaPredicted RBP9.42□□□□□ -0.9
NPIPB2-205ENST00000540412 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
NPIPB2-205ENST00000540412 CCNB3Q8WWL7 1395 aa9.41□□□□□ -0.9
NPIPB2-205ENST00000540412 WDR97A6NE52 1622 aa9.41□□□□□ -0.9
NPIPB2-205ENST00000540412 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
NPIPB2-205ENST00000540412 PRXQ9BXM0 1461 aa9.4□□□□□ -0.9
NPIPB2-205ENST00000540412 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
NPIPB2-205ENST00000540412 PRDM2Q13029 1718 aa9.37□□□□□ -0.91
NPIPB2-205ENST00000540412 RBM19Q9Y4C8 960 aaKnown RBP9.37□□□□□ -0.91
NPIPB2-205ENST00000540412 RAB3GAP2Q9H2M9 1393 aa9.37□□□□□ -0.91
NPIPB2-205ENST00000540412 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
NPIPB2-205ENST00000540412 ERICH6Q7L0X2 663 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms