RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
SCNN1A-215ENST00000540037 PHLDB1Q86UU1 1377 aa19.82■□□□□ 0.76
SCNN1A-215ENST00000540037 PPP1R15AO75807 674 aaPredicted RBP19.81■□□□□ 0.76
SCNN1A-215ENST00000540037 P3H3Q8IVL6 736 aa19.79■□□□□ 0.76
SCNN1A-215ENST00000540037 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
SCNN1A-215ENST00000540037 TIAM1Q13009 1591 aa19.77■□□□□ 0.76
SCNN1A-215ENST00000540037 RBM19Q9Y4C8 960 aaKnown RBP19.76■□□□□ 0.75
SCNN1A-215ENST00000540037 IGF1RP08069 1367 aa19.73■□□□□ 0.75
SCNN1A-215ENST00000540037 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
SCNN1A-215ENST00000540037 NEFLP07196 543 aa19.7■□□□□ 0.74
SCNN1A-215ENST00000540037 ANP32CO43423 234 aa19.68■□□□□ 0.74
SCNN1A-215ENST00000540037 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
SCNN1A-215ENST00000540037 CFTRP13569 1480 aa19.66■□□□□ 0.74
SCNN1A-215ENST00000540037 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
SCNN1A-215ENST00000540037 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
SCNN1A-215ENST00000540037 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
SCNN1A-215ENST00000540037 MAP3K1Q13233 1512 aa19.62■□□□□ 0.73
SCNN1A-215ENST00000540037 IRX6P78412 446 aaPredicted RBP19.62■□□□□ 0.73
SCNN1A-215ENST00000540037 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
SCNN1A-215ENST00000540037 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
SCNN1A-215ENST00000540037 MSH5O43196 834 aa19.59■□□□□ 0.73
SCNN1A-215ENST00000540037 FHOD3Q2V2M9 1422 aa19.57■□□□□ 0.72
SCNN1A-215ENST00000540037 TIMELESSQ9UNS1 1208 aa19.55■□□□□ 0.72
SCNN1A-215ENST00000540037 TONSLQ96HA7 1378 aa19.53■□□□□ 0.72
SCNN1A-215ENST00000540037 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
SCNN1A-215ENST00000540037 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
SCNN1A-215ENST00000540037 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.71
SCNN1A-215ENST00000540037 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
SCNN1A-215ENST00000540037 PTPRKQ15262 1439 aa19.47■□□□□ 0.71
SCNN1A-215ENST00000540037 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
SCNN1A-215ENST00000540037 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
SCNN1A-215ENST00000540037 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
SCNN1A-215ENST00000540037 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.7
SCNN1A-215ENST00000540037 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
SCNN1A-215ENST00000540037 FYCO1Q9BQS8 1478 aa19.39■□□□□ 0.69
SCNN1A-215ENST00000540037 CASKIN1Q8WXD9 1431 aa19.38■□□□□ 0.69
SCNN1A-215ENST00000540037 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
SCNN1A-215ENST00000540037 WASHC2AQ641Q2 1341 aa19.38■□□□□ 0.69
SCNN1A-215ENST00000540037 UACAQ9BZF9 1416 aa19.37■□□□□ 0.69
SCNN1A-215ENST00000540037 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
SCNN1A-215ENST00000540037 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
SCNN1A-215ENST00000540037 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCNN1A-215ENST00000540037 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
SCNN1A-215ENST00000540037 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
SCNN1A-215ENST00000540037 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
SCNN1A-215ENST00000540037 MTUS2Q5JR59 1369 aa19.35■□□□□ 0.69
SCNN1A-215ENST00000540037 PTPN23Q9H3S7 1636 aa19.34■□□□□ 0.69
SCNN1A-215ENST00000540037 NAIPQ13075 1403 aa19.33■□□□□ 0.69
SCNN1A-215ENST00000540037 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.68
SCNN1A-215ENST00000540037 CHIC2Q9UKJ5 165 aa19.33■□□□□ 0.68
SCNN1A-215ENST00000540037 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
SCNN1A-215ENST00000540037 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
SCNN1A-215ENST00000540037 C11orf95C9JLR9 678 aaPredicted RBP19.28■□□□□ 0.68
SCNN1A-215ENST00000540037 B4GALNT3Q6L9W6 998 aa19.27■□□□□ 0.68
SCNN1A-215ENST00000540037 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.68
SCNN1A-215ENST00000540037 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.67
SCNN1A-215ENST00000540037 FOXD1Q16676 465 aa19.26■□□□□ 0.67
SCNN1A-215ENST00000540037 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
SCNN1A-215ENST00000540037 NCOA2Q15596 1464 aa19.25■□□□□ 0.67
SCNN1A-215ENST00000540037 LRRIQ1Q96JM4 1722 aa19.24■□□□□ 0.67
SCNN1A-215ENST00000540037 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
SCNN1A-215ENST00000540037 FMN1Q68DA7 1419 aa19.23■□□□□ 0.67
SCNN1A-215ENST00000540037 DENND4BO75064 1496 aaPredicted RBP19.22■□□□□ 0.67
SCNN1A-215ENST00000540037 PPP4R2Q9NY27 417 aa19.22■□□□□ 0.67
SCNN1A-215ENST00000540037 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
SCNN1A-215ENST00000540037 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
SCNN1A-215ENST00000540037 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.67
SCNN1A-215ENST00000540037 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
SCNN1A-215ENST00000540037 CTTNBP2Q8WZ74 1663 aa19.19■□□□□ 0.66
SCNN1A-215ENST00000540037 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
SCNN1A-215ENST00000540037 L3MBTL2Q969R5 705 aa19.19■□□□□ 0.66
SCNN1A-215ENST00000540037 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
SCNN1A-215ENST00000540037 PRKRIP1Q9H875 184 aaPredicted RBP19.18■□□□□ 0.66
SCNN1A-215ENST00000540037 CNTLNQ9NXG0 1405 aa19.17■□□□□ 0.66
SCNN1A-215ENST00000540037 KDM6BO15054 1643 aa19.17■□□□□ 0.66
SCNN1A-215ENST00000540037 SENP3-EIF4A1A0A087X0R7 540 aa19.17■□□□□ 0.66
SCNN1A-215ENST00000540037 ARID3CA6NKF2 412 aa19.15■□□□□ 0.66
SCNN1A-215ENST00000540037 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
SCNN1A-215ENST00000540037 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
SCNN1A-215ENST00000540037 MPHOSPH9Q99550 1183 aa19.13■□□□□ 0.65
SCNN1A-215ENST00000540037 NESP48681 1621 aa19.12■□□□□ 0.65
SCNN1A-215ENST00000540037 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
SCNN1A-215ENST00000540037 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
SCNN1A-215ENST00000540037 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
SCNN1A-215ENST00000540037 GRIN2BQ13224 1484 aa19.12■□□□□ 0.65
SCNN1A-215ENST00000540037 CCDC7Q96M83 1385 aa19.12■□□□□ 0.65
SCNN1A-215ENST00000540037 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
SCNN1A-215ENST00000540037 SUPT6HQ7KZ85 1726 aaKnown RBP19.1■□□□□ 0.65
SCNN1A-215ENST00000540037 CUL7Q14999 1698 aa19.1■□□□□ 0.65
SCNN1A-215ENST00000540037 ERICH6BQ5W0A0 696 aa19.09■□□□□ 0.65
SCNN1A-215ENST00000540037 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
SCNN1A-215ENST00000540037 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
SCNN1A-215ENST00000540037 UGGT2Q9NYU1 1516 aa19.07■□□□□ 0.64
SCNN1A-215ENST00000540037 PAK3O75914 559 aaPredicted RBP19.06■□□□□ 0.64
SCNN1A-215ENST00000540037 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
SCNN1A-215ENST00000540037 NBR1Q14596 966 aa19.06■□□□□ 0.64
SCNN1A-215ENST00000540037 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
SCNN1A-215ENST00000540037 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
SCNN1A-215ENST00000540037 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
SCNN1A-215ENST00000540037 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 390 ms