RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 KANK4Q5T7N3 995 aaPredicted RBP22.41■■□□□ 1.18
CHFR-213ENST00000536843 ARHGAP35Q9NRY4 1499 aa22.4■■□□□ 1.18
CHFR-213ENST00000536843 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
CHFR-213ENST00000536843 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
CHFR-213ENST00000536843 RBM19Q9Y4C8 960 aaKnown RBP22.35■■□□□ 1.17
CHFR-213ENST00000536843 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.17
CHFR-213ENST00000536843 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
CHFR-213ENST00000536843 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
CHFR-213ENST00000536843 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
CHFR-213ENST00000536843 BCANQ96GW7 911 aa22.26■■□□□ 1.15
CHFR-213ENST00000536843 FKBP8Q14318 412 aa22.25■■□□□ 1.15
CHFR-213ENST00000536843 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
CHFR-213ENST00000536843 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
CHFR-213ENST00000536843 RRBP1Q9P2E9 1410 aaKnown RBP22.2■■□□□ 1.15
CHFR-213ENST00000536843 PRKCSHP14314 528 aaPredicted RBP22.2■■□□□ 1.14
CHFR-213ENST00000536843 WDR62O43379 1518 aa22.18■■□□□ 1.14
CHFR-213ENST00000536843 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
CHFR-213ENST00000536843 MSH5O43196 834 aa22.15■■□□□ 1.14
CHFR-213ENST00000536843 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
CHFR-213ENST00000536843 CCNB3Q8WWL7 1395 aa22.13■■□□□ 1.13
CHFR-213ENST00000536843 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
CHFR-213ENST00000536843 NEFLP07196 543 aa22.11■■□□□ 1.13
CHFR-213ENST00000536843 FANCIQ9NVI1 1328 aa22.1■■□□□ 1.13
CHFR-213ENST00000536843 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
CHFR-213ENST00000536843 THOC2Q8NI27 1593 aaKnown RBP22.1■■□□□ 1.13
CHFR-213ENST00000536843 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
CHFR-213ENST00000536843 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
CHFR-213ENST00000536843 MYT1LQ9UL68 1186 aa22.06■■□□□ 1.12
CHFR-213ENST00000536843 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
CHFR-213ENST00000536843 ITGAEP38570 1179 aa22.05■■□□□ 1.12
CHFR-213ENST00000536843 CUL7Q14999 1698 aa22.04■■□□□ 1.12
CHFR-213ENST00000536843 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
CHFR-213ENST00000536843 ABCA5Q8WWZ7 1642 aa22.03■■□□□ 1.12
CHFR-213ENST00000536843 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
CHFR-213ENST00000536843 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
CHFR-213ENST00000536843 IFT140Q96RY7 1462 aa22.02■■□□□ 1.12
CHFR-213ENST00000536843 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
CHFR-213ENST00000536843 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
CHFR-213ENST00000536843 PCF11O94913 1555 aaKnown RBP22■■□□□ 1.11
CHFR-213ENST00000536843 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
CHFR-213ENST00000536843 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
CHFR-213ENST00000536843 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
CHFR-213ENST00000536843 CFAP43Q8NDM7 1665 aa21.93■■□□□ 1.1
CHFR-213ENST00000536843 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
CHFR-213ENST00000536843 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
CHFR-213ENST00000536843 FYCO1Q9BQS8 1478 aa21.91■■□□□ 1.1
CHFR-213ENST00000536843 CCER2I3L3R5 266 aa21.9■■□□□ 1.1
CHFR-213ENST00000536843 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.09
CHFR-213ENST00000536843 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
CHFR-213ENST00000536843 RAB3GAP2Q9H2M9 1393 aa21.88■■□□□ 1.09
CHFR-213ENST00000536843 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
CHFR-213ENST00000536843 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
CHFR-213ENST00000536843 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
CHFR-213ENST00000536843 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
CHFR-213ENST00000536843 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
CHFR-213ENST00000536843 FMN1Q68DA7 1419 aa21.84■■□□□ 1.09
CHFR-213ENST00000536843 DDX10Q13206 875 aaKnown RBP21.84■■□□□ 1.09
CHFR-213ENST00000536843 SETD5Q9C0A6 1442 aa21.82■■□□□ 1.08
CHFR-213ENST00000536843 CDK11AQ9UQ88 783 aaPredicted RBP21.82■■□□□ 1.08
CHFR-213ENST00000536843 DEKP35659 375 aaKnown RBP21.8■■□□□ 1.08
CHFR-213ENST00000536843 SNAPC4Q5SXM2 1469 aa21.8■■□□□ 1.08
CHFR-213ENST00000536843 EIF4G3O43432 1585 aaKnown RBP21.79■■□□□ 1.08
CHFR-213ENST00000536843 TRIM52Q96A61 297 aa21.79■■□□□ 1.08
CHFR-213ENST00000536843 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
CHFR-213ENST00000536843 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
CHFR-213ENST00000536843 ANP32CO43423 234 aa21.72■■□□□ 1.07
CHFR-213ENST00000536843 MTUS2Q5JR59 1369 aa21.71■■□□□ 1.07
CHFR-213ENST00000536843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.06
CHFR-213ENST00000536843 ERICH6BQ5W0A0 696 aa21.69■■□□□ 1.06
CHFR-213ENST00000536843 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
CHFR-213ENST00000536843 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
CHFR-213ENST00000536843 LRRIQ1Q96JM4 1722 aa21.66■■□□□ 1.06
CHFR-213ENST00000536843 TIMELESSQ9UNS1 1208 aa21.66■■□□□ 1.06
CHFR-213ENST00000536843 SIN3AQ96ST3 1273 aa21.62■■□□□ 1.05
CHFR-213ENST00000536843 NCOA2Q15596 1464 aa21.61■■□□□ 1.05
CHFR-213ENST00000536843 SYNJ2O15056 1496 aa21.58■■□□□ 1.05
CHFR-213ENST00000536843 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
CHFR-213ENST00000536843 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
CHFR-213ENST00000536843 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
CHFR-213ENST00000536843 MYOM3Q5VTT5 1437 aa21.56■■□□□ 1.04
CHFR-213ENST00000536843 ANO8Q9HCE9 1232 aaPredicted RBP21.56■■□□□ 1.04
CHFR-213ENST00000536843 PPP4R2Q9NY27 417 aa21.56■■□□□ 1.04
CHFR-213ENST00000536843 EHBP1L1Q8N3D4 1523 aa21.55■■□□□ 1.04
CHFR-213ENST00000536843 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
CHFR-213ENST00000536843 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
CHFR-213ENST00000536843 MAGI3Q5TCQ9 1506 aa21.54■■□□□ 1.04
CHFR-213ENST00000536843 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
CHFR-213ENST00000536843 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.03
CHFR-213ENST00000536843 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
CHFR-213ENST00000536843 UGGT2Q9NYU1 1516 aa21.5■■□□□ 1.03
CHFR-213ENST00000536843 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
CHFR-213ENST00000536843 HNRNPUQ00839 825 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHFR-213ENST00000536843 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
CHFR-213ENST00000536843 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
CHFR-213ENST00000536843 HECW1Q76N89 1606 aa21.48■■□□□ 1.03
CHFR-213ENST00000536843 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
CHFR-213ENST00000536843 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
CHFR-213ENST00000536843 FBLN2P98095 1184 aa21.46■■□□□ 1.03
CHFR-213ENST00000536843 PTPN23Q9H3S7 1636 aa21.45■■□□□ 1.02
CHFR-213ENST00000536843 NAIPQ13075 1403 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms