RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 SETD5Q9C0A6 1442 aa27.07■■□□□ 1.92
CHPF-203ENST00000535926 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
CHPF-203ENST00000535926 FAM50AQ14320 339 aaKnown RBP27.05■■□□□ 1.92
CHPF-203ENST00000535926 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
CHPF-203ENST00000535926 ATP1B4Q9UN42 357 aaPredicted RBP27.03■■□□□ 1.92
CHPF-203ENST00000535926 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
CHPF-203ENST00000535926 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
CHPF-203ENST00000535926 SIN3AQ96ST3 1273 aa26.99■■□□□ 1.91
CHPF-203ENST00000535926 FHOD3Q2V2M9 1422 aa26.97■■□□□ 1.91
CHPF-203ENST00000535926 PCF11O94913 1555 aaKnown RBP26.97■■□□□ 1.91
CHPF-203ENST00000535926 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
CHPF-203ENST00000535926 POLA1P09884 1462 aaPredicted RBP26.92■■□□□ 1.9
CHPF-203ENST00000535926 KCNH8Q96L42 1107 aa26.91■■□□□ 1.9
CHPF-203ENST00000535926 CFAP43Q8NDM7 1665 aa26.9■■□□□ 1.9
CHPF-203ENST00000535926 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.9
CHPF-203ENST00000535926 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
CHPF-203ENST00000535926 SUPT16HQ9Y5B9 1047 aaKnown RBP26.87■■□□□ 1.89
CHPF-203ENST00000535926 NESP48681 1621 aa26.87■■□□□ 1.89
CHPF-203ENST00000535926 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
CHPF-203ENST00000535926 CASKIN1Q8WXD9 1431 aa26.85■■□□□ 1.89
CHPF-203ENST00000535926 FYCO1Q9BQS8 1478 aa26.84■■□□□ 1.89
CHPF-203ENST00000535926 EFCAB5A4FU69 1503 aa26.8■■□□□ 1.88
CHPF-203ENST00000535926 DDX10Q13206 875 aaKnown RBP26.79■■□□□ 1.88
CHPF-203ENST00000535926 AQRO60306 1485 aaKnown RBP eCLIP26.79■■□□□ 1.88
CHPF-203ENST00000535926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.77■■□□□ 1.885e-6■■■■■ 46.2
CHPF-203ENST00000535926 TIMELESSQ9UNS1 1208 aa26.75■■□□□ 1.87
CHPF-203ENST00000535926 PPP1R15AO75807 674 aaPredicted RBP26.73■■□□□ 1.87
CHPF-203ENST00000535926 CUL7Q14999 1698 aa26.72■■□□□ 1.87
CHPF-203ENST00000535926 HIRIP3Q9BW71 556 aaPredicted RBP26.71■■□□□ 1.87
CHPF-203ENST00000535926 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
CHPF-203ENST00000535926 FGD6Q6ZV73 1430 aa26.7■■□□□ 1.86
CHPF-203ENST00000535926 SNAPC4Q5SXM2 1469 aa26.69■■□□□ 1.86
CHPF-203ENST00000535926 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
CHPF-203ENST00000535926 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
CHPF-203ENST00000535926 CTTNBP2Q8WZ74 1663 aa26.67■■□□□ 1.86
CHPF-203ENST00000535926 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
CHPF-203ENST00000535926 MTUS2Q5JR59 1369 aa26.65■■□□□ 1.86
CHPF-203ENST00000535926 CCDC18Q5T9S5 1454 aa26.57■■□□□ 1.84
CHPF-203ENST00000535926 HFM1A2PYH4 1435 aa26.56■■□□□ 1.84
CHPF-203ENST00000535926 GAPVD1Q14C86 1478 aa26.55■■□□□ 1.84
CHPF-203ENST00000535926 SAMD9Q5K651 1589 aa26.54■■□□□ 1.84
CHPF-203ENST00000535926 NCOA2Q15596 1464 aa26.53■■□□□ 1.84
CHPF-203ENST00000535926 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
CHPF-203ENST00000535926 ABCA5Q8WWZ7 1642 aa26.52■■□□□ 1.84
CHPF-203ENST00000535926 TONSLQ96HA7 1378 aa26.52■■□□□ 1.84
CHPF-203ENST00000535926 UACAQ9BZF9 1416 aa26.52■■□□□ 1.84
CHPF-203ENST00000535926 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
CHPF-203ENST00000535926 DNAJC5BQ9UF47 199 aa26.52■■□□□ 1.84
CHPF-203ENST00000535926 LRRIQ1Q96JM4 1722 aa26.51■■□□□ 1.83
CHPF-203ENST00000535926 MYT1Q01538 1121 aa26.51■■□□□ 1.83
CHPF-203ENST00000535926 NAIPQ13075 1403 aa26.51■■□□□ 1.83
CHPF-203ENST00000535926 MYOM3Q5VTT5 1437 aa26.51■■□□□ 1.83
CHPF-203ENST00000535926 PTPN23Q9H3S7 1636 aa26.48■■□□□ 1.83
CHPF-203ENST00000535926 TSHZ2Q9NRE2 1034 aa26.45■■□□□ 1.83
CHPF-203ENST00000535926 CCER2I3L3R5 266 aa26.45■■□□□ 1.82
CHPF-203ENST00000535926 ANP32CO43423 234 aa26.44■■□□□ 1.82
CHPF-203ENST00000535926 PDS5BQ9NTI5 1447 aa26.41■■□□□ 1.82
CHPF-203ENST00000535926 MAGI3Q5TCQ9 1506 aa26.4■■□□□ 1.82
CHPF-203ENST00000535926 BCANQ96GW7 911 aa26.4■■□□□ 1.82
CHPF-203ENST00000535926 TRIM52Q96A61 297 aa26.39■■□□□ 1.82
CHPF-203ENST00000535926 FKBP8Q14318 412 aa26.39■■□□□ 1.81
CHPF-203ENST00000535926 RRP7BPQ9NSQ0 103 aa26.38■■□□□ 1.81
CHPF-203ENST00000535926 EHBP1L1Q8N3D4 1523 aa26.38■■□□□ 1.81
CHPF-203ENST00000535926 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
CHPF-203ENST00000535926 SUPT6HQ7KZ85 1726 aaKnown RBP26.37■■□□□ 1.81
CHPF-203ENST00000535926 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
CHPF-203ENST00000535926 UGGT2Q9NYU1 1516 aa26.36■■□□□ 1.81
CHPF-203ENST00000535926 ARHGEF11O15085 1522 aa26.36■■□□□ 1.81
CHPF-203ENST00000535926 KDM5BQ9UGL1 1544 aa26.35■■□□□ 1.81
CHPF-203ENST00000535926 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
CHPF-203ENST00000535926 DENND4BO75064 1496 aaPredicted RBP26.28■■□□□ 1.8
CHPF-203ENST00000535926 TCOF1Q13428 1488 aaKnown RBP26.26■■□□□ 1.79
CHPF-203ENST00000535926 KIF21AQ7Z4S6 1674 aa26.26■■□□□ 1.79
CHPF-203ENST00000535926 ARID3CA6NKF2 412 aa26.24■■□□□ 1.79
CHPF-203ENST00000535926 EPRSP07814 1512 aaKnown RBP26.23■■□□□ 1.79
CHPF-203ENST00000535926 HSPA5P11021 654 aaKnown RBP26.2■■□□□ 1.78
CHPF-203ENST00000535926 KDM6BO15054 1643 aa26.2■■□□□ 1.78
CHPF-203ENST00000535926 CDK13Q14004 1512 aaKnown RBP26.19■■□□□ 1.78
CHPF-203ENST00000535926 WASHC2AQ641Q2 1341 aa26.18■■□□□ 1.78
CHPF-203ENST00000535926 MPHOSPH9Q99550 1183 aa26.18■■□□□ 1.78
CHPF-203ENST00000535926 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
CHPF-203ENST00000535926 IQGAP2Q13576 1575 aa26.16■■□□□ 1.78
CHPF-203ENST00000535926 NEFLP07196 543 aa26.16■■□□□ 1.78
CHPF-203ENST00000535926 FOXD1Q16676 465 aa26.16■■□□□ 1.78
CHPF-203ENST00000535926 AKNAQ7Z591 1439 aa26.14■■□□□ 1.77
CHPF-203ENST00000535926 MIA2Q96PC5 1412 aa26.14■■□□□ 1.77
CHPF-203ENST00000535926 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
CHPF-203ENST00000535926 L3MBTL2Q969R5 705 aa26.12■■□□□ 1.77
CHPF-203ENST00000535926 PBRM1Q86U86 1689 aa26.11■■□□□ 1.77
CHPF-203ENST00000535926 WDR62O43379 1518 aa26.09■■□□□ 1.77
CHPF-203ENST00000535926 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
CHPF-203ENST00000535926 EIF4G2P78344 907 aaKnown RBP eCLIP26.09■■□□□ 1.77
CHPF-203ENST00000535926 HNRNPUQ00839 825 aaKnown RBP eCLIP26.06■■□□□ 1.76
CHPF-203ENST00000535926 C11orf95C9JLR9 678 aaPredicted RBP26.05■■□□□ 1.76
CHPF-203ENST00000535926 ZNF644Q9H582 1327 aaPredicted RBP26.04■■□□□ 1.76
CHPF-203ENST00000535926 DAPK1P53355 1430 aa26■■□□□ 1.75
CHPF-203ENST00000535926 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
CHPF-203ENST00000535926 CCDC184Q52MB2 194 aa26■■□□□ 1.75
CHPF-203ENST00000535926 NBPF8Q3BBV2 869 aa25.99■■□□□ 1.75
CHPF-203ENST00000535926 ZNF608Q9ULD9 1512 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms