RNA–Protein interactions for RNA: ENST00000535348.5

AP3B2-202, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 1 (best) BASIC

Gene AP3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-202ENST00000535348 RAPGEF2Q9Y4G8 1499 aa17.34■□□□□ 0.37
AP3B2-202ENST00000535348 APLP2Q06481 763 aa17.34■□□□□ 0.37
AP3B2-202ENST00000535348 ITGAEP38570 1179 aa17.33■□□□□ 0.37
AP3B2-202ENST00000535348 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
AP3B2-202ENST00000535348 IFT140Q96RY7 1462 aa17.33■□□□□ 0.36
AP3B2-202ENST00000535348 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
AP3B2-202ENST00000535348 CLIP1P30622 1438 aa17.31■□□□□ 0.36
AP3B2-202ENST00000535348 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP3B2-202ENST00000535348 ERICH3Q5RHP9 1530 aa17.28■□□□□ 0.36
AP3B2-202ENST00000535348 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
AP3B2-202ENST00000535348 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
AP3B2-202ENST00000535348 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
AP3B2-202ENST00000535348 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
AP3B2-202ENST00000535348 CUL7Q14999 1698 aa17.22■□□□□ 0.35
AP3B2-202ENST00000535348 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
AP3B2-202ENST00000535348 PBRM1Q86U86 1689 aa17.22■□□□□ 0.35
AP3B2-202ENST00000535348 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
AP3B2-202ENST00000535348 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
AP3B2-202ENST00000535348 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
AP3B2-202ENST00000535348 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
AP3B2-202ENST00000535348 SNAPC4Q5SXM2 1469 aa17.1■□□□□ 0.33
AP3B2-202ENST00000535348 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
AP3B2-202ENST00000535348 DHX57Q6P158 1386 aaKnown RBP17.08■□□□□ 0.32
AP3B2-202ENST00000535348 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
AP3B2-202ENST00000535348 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
AP3B2-202ENST00000535348 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
AP3B2-202ENST00000535348 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
AP3B2-202ENST00000535348 SYNJ2O15056 1496 aa17■□□□□ 0.31
AP3B2-202ENST00000535348 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
AP3B2-202ENST00000535348 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
AP3B2-202ENST00000535348 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
AP3B2-202ENST00000535348 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
AP3B2-202ENST00000535348 FBLN2P98095 1184 aa16.97■□□□□ 0.31
AP3B2-202ENST00000535348 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
AP3B2-202ENST00000535348 RRBP1Q9P2E9 1410 aaKnown RBP16.9■□□□□ 0.3
AP3B2-202ENST00000535348 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
AP3B2-202ENST00000535348 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
AP3B2-202ENST00000535348 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
AP3B2-202ENST00000535348 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
AP3B2-202ENST00000535348 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
AP3B2-202ENST00000535348 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
AP3B2-202ENST00000535348 CHD1O14646 1710 aa16.87■□□□□ 0.29
AP3B2-202ENST00000535348 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
AP3B2-202ENST00000535348 NUP160Q12769 1436 aa16.86■□□□□ 0.29
AP3B2-202ENST00000535348 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
AP3B2-202ENST00000535348 SAMD9Q5K651 1589 aa16.84■□□□□ 0.29
AP3B2-202ENST00000535348 FHOD3Q2V2M9 1422 aa16.83■□□□□ 0.28
AP3B2-202ENST00000535348 BCANQ96GW7 911 aa16.83■□□□□ 0.28
AP3B2-202ENST00000535348 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
AP3B2-202ENST00000535348 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
AP3B2-202ENST00000535348 RAB3GAP2Q9H2M9 1393 aa16.77■□□□□ 0.27
AP3B2-202ENST00000535348 DDX10Q13206 875 aaKnown RBP16.76■□□□□ 0.27
AP3B2-202ENST00000535348 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
AP3B2-202ENST00000535348 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
AP3B2-202ENST00000535348 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
AP3B2-202ENST00000535348 FKBP8Q14318 412 aa16.74■□□□□ 0.27
AP3B2-202ENST00000535348 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
AP3B2-202ENST00000535348 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
AP3B2-202ENST00000535348 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
AP3B2-202ENST00000535348 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
AP3B2-202ENST00000535348 MAPKBP1O60336 1514 aa16.71■□□□□ 0.27
AP3B2-202ENST00000535348 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
AP3B2-202ENST00000535348 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
AP3B2-202ENST00000535348 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
AP3B2-202ENST00000535348 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
AP3B2-202ENST00000535348 CARMIL2Q6F5E8 1435 aa16.66■□□□□ 0.26
AP3B2-202ENST00000535348 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
AP3B2-202ENST00000535348 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
AP3B2-202ENST00000535348 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
AP3B2-202ENST00000535348 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
AP3B2-202ENST00000535348 NEFLP07196 543 aa16.63■□□□□ 0.25
AP3B2-202ENST00000535348 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
AP3B2-202ENST00000535348 LRRIQ1Q96JM4 1722 aa16.61■□□□□ 0.25
AP3B2-202ENST00000535348 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
AP3B2-202ENST00000535348 LRRC9Q6ZRR7 1453 aa16.6■□□□□ 0.25
AP3B2-202ENST00000535348 CHIC2Q9UKJ5 165 aa16.59■□□□□ 0.25
AP3B2-202ENST00000535348 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
AP3B2-202ENST00000535348 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.25
AP3B2-202ENST00000535348 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
AP3B2-202ENST00000535348 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
AP3B2-202ENST00000535348 ANP32CO43423 234 aa16.57■□□□□ 0.24
AP3B2-202ENST00000535348 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
AP3B2-202ENST00000535348 PLB1Q6P1J6 1458 aa16.55■□□□□ 0.24
AP3B2-202ENST00000535348 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
AP3B2-202ENST00000535348 RAPGEF6Q8TEU7 1601 aa16.55■□□□□ 0.24
AP3B2-202ENST00000535348 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
AP3B2-202ENST00000535348 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
AP3B2-202ENST00000535348 PTPRGP23470 1445 aa16.52■□□□□ 0.24
AP3B2-202ENST00000535348 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.23
AP3B2-202ENST00000535348 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
AP3B2-202ENST00000535348 CCDC18Q5T9S5 1454 aa16.51■□□□□ 0.23
AP3B2-202ENST00000535348 TIMELESSQ9UNS1 1208 aa16.5■□□□□ 0.23
AP3B2-202ENST00000535348 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
AP3B2-202ENST00000535348 ABCA8O94911 1581 aa16.49■□□□□ 0.23
AP3B2-202ENST00000535348 RRP7BPQ9NSQ0 103 aa16.47■□□□□ 0.23
AP3B2-202ENST00000535348 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
AP3B2-202ENST00000535348 MAGI3Q5TCQ9 1506 aa16.46■□□□□ 0.23
AP3B2-202ENST00000535348 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
AP3B2-202ENST00000535348 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
AP3B2-202ENST00000535348 UACAQ9BZF9 1416 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms