RNA–Protein interactions for RNA: ENST00000535322.1

PTPRO-206, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 3

Gene PTPRO, Length 472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-206ENST00000535322 GOLGA3Q08378 1498 aa8.44□□□□□ -1.06
PTPRO-206ENST00000535322 RUSC2Q8N2Y8 1516 aa8.41□□□□□ -1.06
PTPRO-206ENST00000535322 TOPBP1Q92547 1522 aa8.41□□□□□ -1.06
PTPRO-206ENST00000535322 PRXQ9BXM0 1461 aa8.41□□□□□ -1.06
PTPRO-206ENST00000535322 ABCA10Q8WWZ4 1543 aa8.4□□□□□ -1.06
PTPRO-206ENST00000535322 FGD5Q6ZNL6 1462 aa8.4□□□□□ -1.06
PTPRO-206ENST00000535322 NESP48681 1621 aa8.4□□□□□ -1.07
PTPRO-206ENST00000535322 ABCA5Q8WWZ7 1642 aa8.4□□□□□ -1.07
PTPRO-206ENST00000535322 TNIKQ9UKE5 1360 aa8.39□□□□□ -1.07
PTPRO-206ENST00000535322 CUL7Q14999 1698 aa8.39□□□□□ -1.07
PTPRO-206ENST00000535322 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
PTPRO-206ENST00000535322 URB2Q14146 1524 aaKnown RBP8.37□□□□□ -1.07
PTPRO-206ENST00000535322 POLA1P09884 1462 aaPredicted RBP8.37□□□□□ -1.07
PTPRO-206ENST00000535322 KIF27Q86VH2 1401 aa8.37□□□□□ -1.07
PTPRO-206ENST00000535322 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
PTPRO-206ENST00000535322 WDR62O43379 1518 aa8.34□□□□□ -1.07
PTPRO-206ENST00000535322 CEP162Q5TB80 1403 aa8.34□□□□□ -1.07
PTPRO-206ENST00000535322 THOC2Q8NI27 1593 aaKnown RBP8.34□□□□□ -1.07
PTPRO-206ENST00000535322 LOC105371045A0A1W2PR82 267 aa8.33□□□□□ -1.08
PTPRO-206ENST00000535322 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
PTPRO-206ENST00000535322 CTTNBP2Q8WZ74 1663 aa8.32□□□□□ -1.08
PTPRO-206ENST00000535322 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
PTPRO-206ENST00000535322 PBRM1Q86U86 1689 aa8.31□□□□□ -1.08
PTPRO-206ENST00000535322 CUX2O14529 1486 aa8.31□□□□□ -1.08
PTPRO-206ENST00000535322 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
PTPRO-206ENST00000535322 FAM9AQ8IZU1 332 aaPredicted RBP8.26□□□□□ -1.09
PTPRO-206ENST00000535322 ADAMTS12P58397 1594 aa8.26□□□□□ -1.09
PTPRO-206ENST00000535322 VPS8Q8N3P4 1428 aa8.24□□□□□ -1.09
PTPRO-206ENST00000535322 RAD54L2Q9Y4B4 1467 aa8.24□□□□□ -1.09
PTPRO-206ENST00000535322 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
PTPRO-206ENST00000535322 IGF1RP08069 1367 aa8.23□□□□□ -1.09
PTPRO-206ENST00000535322 CLIP1P30622 1438 aa8.23□□□□□ -1.09
PTPRO-206ENST00000535322 ARAP1Q96P48 1450 aa8.23□□□□□ -1.09
PTPRO-206ENST00000535322 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
PTPRO-206ENST00000535322 EIF4G3O43432 1585 aaKnown RBP8.22□□□□□ -1.09
PTPRO-206ENST00000535322 SAMD9Q5K651 1589 aa8.22□□□□□ -1.09
PTPRO-206ENST00000535322 RBM42Q9BTD8 480 aaKnown RBP8.21□□□□□ -1.1
PTPRO-206ENST00000535322 CFAP43Q8NDM7 1665 aa8.21□□□□□ -1.1
PTPRO-206ENST00000535322 GAPVD1Q14C86 1478 aa8.2□□□□□ -1.1
PTPRO-206ENST00000535322 FBLN2P98095 1184 aa8.2□□□□□ -1.1
PTPRO-206ENST00000535322 ARHGAP35Q9NRY4 1499 aa8.19□□□□□ -1.1
PTPRO-206ENST00000535322 MAP3K1Q13233 1512 aa8.19□□□□□ -1.1
PTPRO-206ENST00000535322 OSCARQ8IYS5 282 aa8.19□□□□□ -1.1
PTPRO-206ENST00000535322 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
PTPRO-206ENST00000535322 MKRN4PQ13434 485 aaPredicted RBP8.18□□□□□ -1.1
PTPRO-206ENST00000535322 GRIN2BQ13224 1484 aa8.16□□□□□ -1.1
PTPRO-206ENST00000535322 AQRO60306 1485 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTPRO-206ENST00000535322 MAGI1Q96QZ7 1491 aaPredicted RBP8.14□□□□□ -1.11
PTPRO-206ENST00000535322 FHAD1B1AJZ9 1412 aa8.14□□□□□ -1.11
PTPRO-206ENST00000535322 PCF11O94913 1555 aaKnown RBP8.14□□□□□ -1.11
PTPRO-206ENST00000535322 ERCC6Q03468 1493 aa8.13□□□□□ -1.11
PTPRO-206ENST00000535322 IQGAP2Q13576 1575 aa8.13□□□□□ -1.11
PTPRO-206ENST00000535322 TRIM26Q12899 539 aaPredicted RBP8.12□□□□□ -1.11
PTPRO-206ENST00000535322 TIAM1Q13009 1591 aa8.12□□□□□ -1.11
PTPRO-206ENST00000535322 FYCO1Q9BQS8 1478 aa8.12□□□□□ -1.11
PTPRO-206ENST00000535322 UBTFP17480 764 aaKnown RBP8.11□□□□□ -1.11
PTPRO-206ENST00000535322 UGGT2Q9NYU1 1516 aa8.11□□□□□ -1.11
PTPRO-206ENST00000535322 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
PTPRO-206ENST00000535322 LRRIQ1Q96JM4 1722 aa8.1□□□□□ -1.11
PTPRO-206ENST00000535322 SNAPC4Q5SXM2 1469 aa8.1□□□□□ -1.11
PTPRO-206ENST00000535322 TDRD9Q8NDG6 1382 aaKnown RBP8.09□□□□□ -1.12
PTPRO-206ENST00000535322 GRIN2AQ12879 1464 aa8.08□□□□□ -1.12
PTPRO-206ENST00000535322 SP7Q8TDD2 431 aaPredicted RBP8.08□□□□□ -1.12
PTPRO-206ENST00000535322 AKT1S1Q96B36 256 aa8.08□□□□□ -1.12
PTPRO-206ENST00000535322 SYNJ2O15056 1496 aa8.07□□□□□ -1.12
PTPRO-206ENST00000535322 KIAA0556O60303 1618 aa8.07□□□□□ -1.12
PTPRO-206ENST00000535322 CEP170Q5SW79 1584 aa8.06□□□□□ -1.12
PTPRO-206ENST00000535322 SPDYE2BA6NHP3 402 aa8.06□□□□□ -1.12
PTPRO-206ENST00000535322 SPDYE6P0CI01 402 aa8.06□□□□□ -1.12
PTPRO-206ENST00000535322 SPDYE2Q495Y8 402 aa8.06□□□□□ -1.12
PTPRO-206ENST00000535322 NUP160Q12769 1436 aa8.05□□□□□ -1.12
PTPRO-206ENST00000535322 FMN1Q68DA7 1419 aa8.05□□□□□ -1.12
PTPRO-206ENST00000535322 CASKIN1Q8WXD9 1431 aa8.05□□□□□ -1.12
PTPRO-206ENST00000535322 KIAA0586Q9BVV6 1533 aa8.05□□□□□ -1.12
PTPRO-206ENST00000535322 HECW1Q76N89 1606 aa8.05□□□□□ -1.12
PTPRO-206ENST00000535322 RRBP1Q9P2E9 1410 aaKnown RBP8.03□□□□□ -1.12
PTPRO-206ENST00000535322 ZNF692Q9BU19 519 aaPredicted RBP8.03□□□□□ -1.12
PTPRO-206ENST00000535322 CHD1O14646 1710 aa8.03□□□□□ -1.12
PTPRO-206ENST00000535322 SHROOM2Q13796 1616 aa8.03□□□□□ -1.12
PTPRO-206ENST00000535322 REM2Q8IYK8 340 aaPredicted RBP8.02□□□□□ -1.13
PTPRO-206ENST00000535322 PCGF6Q9BYE7 350 aa8.02□□□□□ -1.13
PTPRO-206ENST00000535322 EHBP1L1Q8N3D4 1523 aa8.02□□□□□ -1.13
PTPRO-206ENST00000535322 LRRC9Q6ZRR7 1453 aa8.01□□□□□ -1.13
PTPRO-206ENST00000535322 PLSCR2Q9NRY7 297 aa8.01□□□□□ -1.13
PTPRO-206ENST00000535322 ARHGEF11O15085 1522 aa8.01□□□□□ -1.13
PTPRO-206ENST00000535322 DISP1Q96F81 1524 aa8.01□□□□□ -1.13
PTPRO-206ENST00000535322 FHOD3Q2V2M9 1422 aa8.01□□□□□ -1.13
PTPRO-206ENST00000535322 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
PTPRO-206ENST00000535322 HRCP23327 699 aa7.99□□□□□ -1.13
PTPRO-206ENST00000535322 SSUH2Q9Y2M2 353 aa7.99□□□□□ -1.13
PTPRO-206ENST00000535322 SUPT6HQ7KZ85 1726 aaKnown RBP7.98□□□□□ -1.13
PTPRO-206ENST00000535322 RAPGEF6Q8TEU7 1601 aa7.98□□□□□ -1.13
PTPRO-206ENST00000535322 ADCY10Q96PN6 1610 aa7.98□□□□□ -1.13
PTPRO-206ENST00000535322 CLASP1Q7Z460 1538 aa7.96□□□□□ -1.14
PTPRO-206ENST00000535322 CHRDL2Q6WN34 429 aa7.95□□□□□ -1.14
PTPRO-206ENST00000535322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRO-206ENST00000535322 ABCA8O94911 1581 aa7.94□□□□□ -1.14
PTPRO-206ENST00000535322 EPRSP07814 1512 aaKnown RBP7.93□□□□□ -1.14
PTPRO-206ENST00000535322 MAGI3Q5TCQ9 1506 aa7.93□□□□□ -1.14
PTPRO-206ENST00000535322 PITPNM1O00562 1244 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms