RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
TRAPPC4-214ENST00000533632 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
TRAPPC4-214ENST00000533632 ARHGEF11O15085 1522 aa22.05■■□□□ 1.12
TRAPPC4-214ENST00000533632 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
TRAPPC4-214ENST00000533632 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
TRAPPC4-214ENST00000533632 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
TRAPPC4-214ENST00000533632 ERCC6L2Q5T890 1561 aa21.97■■□□□ 1.11
TRAPPC4-214ENST00000533632 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
TRAPPC4-214ENST00000533632 CTTNBP2Q8WZ74 1663 aa21.95■■□□□ 1.1
TRAPPC4-214ENST00000533632 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
TRAPPC4-214ENST00000533632 IQGAP2Q13576 1575 aa21.92■■□□□ 1.1
TRAPPC4-214ENST00000533632 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
TRAPPC4-214ENST00000533632 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
TRAPPC4-214ENST00000533632 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
TRAPPC4-214ENST00000533632 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
TRAPPC4-214ENST00000533632 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
TRAPPC4-214ENST00000533632 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
TRAPPC4-214ENST00000533632 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
TRAPPC4-214ENST00000533632 CYB5RLQ6IPT4 315 aa21.76■■□□□ 1.07
TRAPPC4-214ENST00000533632 KIAA0556O60303 1618 aa21.74■■□□□ 1.07
TRAPPC4-214ENST00000533632 CARMIL2Q6F5E8 1435 aa21.69■■□□□ 1.06
TRAPPC4-214ENST00000533632 SAMD9Q5K651 1589 aa21.68■■□□□ 1.06
TRAPPC4-214ENST00000533632 RANGAP1P46060 587 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC4-214ENST00000533632 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
TRAPPC4-214ENST00000533632 PTPRGP23470 1445 aa21.6■■□□□ 1.05
TRAPPC4-214ENST00000533632 ADCY10Q96PN6 1610 aa21.59■■□□□ 1.05
TRAPPC4-214ENST00000533632 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
TRAPPC4-214ENST00000533632 CLIP1P30622 1438 aa21.59■■□□□ 1.05
TRAPPC4-214ENST00000533632 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
TRAPPC4-214ENST00000533632 TTBK1Q5TCY1 1321 aaPredicted RBP21.54■■□□□ 1.04
TRAPPC4-214ENST00000533632 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
TRAPPC4-214ENST00000533632 FHOD3Q2V2M9 1422 aa21.5■■□□□ 1.03
TRAPPC4-214ENST00000533632 ABCA8O94911 1581 aa21.5■■□□□ 1.03
TRAPPC4-214ENST00000533632 UACAQ9BZF9 1416 aa21.49■■□□□ 1.03
TRAPPC4-214ENST00000533632 UHRF1BP1LA0JNW5 1464 aa21.49■■□□□ 1.03
TRAPPC4-214ENST00000533632 PLB1Q6P1J6 1458 aa21.49■■□□□ 1.03
TRAPPC4-214ENST00000533632 ABCC2Q92887 1545 aa21.48■■□□□ 1.03
TRAPPC4-214ENST00000533632 KDM5BQ9UGL1 1544 aa21.4■■□□□ 1.02
TRAPPC4-214ENST00000533632 RAPGEF6Q8TEU7 1601 aa21.39■■□□□ 1.02
TRAPPC4-214ENST00000533632 ZCCHC11Q5TAX3 1644 aaKnown RBP21.38■■□□□ 1.01
TRAPPC4-214ENST00000533632 MAPKBP1O60336 1514 aa21.38■■□□□ 1.01
TRAPPC4-214ENST00000533632 PCF11O94913 1555 aaKnown RBP21.33■■□□□ 1
TRAPPC4-214ENST00000533632 NUP153P49790 1475 aaKnown RBP21.33■■□□□ 1
TRAPPC4-214ENST00000533632 FMN1Q68DA7 1419 aa21.32■■□□□ 1
TRAPPC4-214ENST00000533632 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
TRAPPC4-214ENST00000533632 KIF13AQ9H1H9 1805 aa21.3■■□□□ 1
TRAPPC4-214ENST00000533632 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
TRAPPC4-214ENST00000533632 ATP10BO94823 1461 aa21.29■■□□□ 1
TRAPPC4-214ENST00000533632 ASXL2Q76L83 1435 aa21.27■■□□□ 1
TRAPPC4-214ENST00000533632 LRRIQ1Q96JM4 1722 aa21.27■■□□□ 1
TRAPPC4-214ENST00000533632 DIP2BQ9P265 1576 aa21.26■□□□□ 0.99
TRAPPC4-214ENST00000533632 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
TRAPPC4-214ENST00000533632 ABCC10Q5T3U5 1492 aa21.24■□□□□ 0.99
TRAPPC4-214ENST00000533632 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
TRAPPC4-214ENST00000533632 ARID3CA6NKF2 412 aa21.23■□□□□ 0.99
TRAPPC4-214ENST00000533632 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
TRAPPC4-214ENST00000533632 CDK13Q14004 1512 aaKnown RBP21.2■□□□□ 0.98
TRAPPC4-214ENST00000533632 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC4-214ENST00000533632 WDR7Q9Y4E6 1490 aa21.19■□□□□ 0.98
TRAPPC4-214ENST00000533632 EPRSP07814 1512 aaKnown RBP21.18■□□□□ 0.98
TRAPPC4-214ENST00000533632 GLI2P10070 1586 aa21.15■□□□□ 0.98
TRAPPC4-214ENST00000533632 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC4-214ENST00000533632 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
TRAPPC4-214ENST00000533632 CFAP43Q8NDM7 1665 aa21.12■□□□□ 0.97
TRAPPC4-214ENST00000533632 TIAM1Q13009 1591 aa21.1■□□□□ 0.97
TRAPPC4-214ENST00000533632 MAP3K4Q9Y6R4 1608 aa21.1■□□□□ 0.97
TRAPPC4-214ENST00000533632 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
TRAPPC4-214ENST00000533632 PPRC1Q5VV67 1664 aaKnown RBP21.08■□□□□ 0.97
TRAPPC4-214ENST00000533632 TSPOAP1O95153 1857 aa21.08■□□□□ 0.96
TRAPPC4-214ENST00000533632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.96
TRAPPC4-214ENST00000533632 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.96
TRAPPC4-214ENST00000533632 MAGI3Q5TCQ9 1506 aa21.06■□□□□ 0.96
TRAPPC4-214ENST00000533632 MAP3K1Q13233 1512 aa21.05■□□□□ 0.96
TRAPPC4-214ENST00000533632 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
TRAPPC4-214ENST00000533632 ABCA9Q8IUA7 1624 aa21.04■□□□□ 0.96
TRAPPC4-214ENST00000533632 PLEKHD1A6NEE1 506 aa21.02■□□□□ 0.96
TRAPPC4-214ENST00000533632 KANK4Q5T7N3 995 aaPredicted RBP21■□□□□ 0.95
TRAPPC4-214ENST00000533632 KIF14Q15058 1648 aa20.99■□□□□ 0.95
TRAPPC4-214ENST00000533632 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC4-214ENST00000533632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.99■□□□□ 0.95
TRAPPC4-214ENST00000533632 TTC37Q6PGP7 1564 aa20.99■□□□□ 0.95
TRAPPC4-214ENST00000533632 LRRC9Q6ZRR7 1453 aa20.97■□□□□ 0.95
TRAPPC4-214ENST00000533632 APLP2Q06481 763 aa20.96■□□□□ 0.95
TRAPPC4-214ENST00000533632 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
TRAPPC4-214ENST00000533632 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
TRAPPC4-214ENST00000533632 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
TRAPPC4-214ENST00000533632 CDK11AQ9UQ88 783 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC4-214ENST00000533632 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
TRAPPC4-214ENST00000533632 TEX14Q8IWB6 1497 aa20.87■□□□□ 0.93
TRAPPC4-214ENST00000533632 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
TRAPPC4-214ENST00000533632 SUPT6HQ7KZ85 1726 aaKnown RBP20.86■□□□□ 0.93
TRAPPC4-214ENST00000533632 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
TRAPPC4-214ENST00000533632 CDC42BPBQ9Y5S2 1711 aa20.84■□□□□ 0.93
TRAPPC4-214ENST00000533632 COL17A1Q9UMD9 1497 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC4-214ENST00000533632 NCOA2Q15596 1464 aa20.83■□□□□ 0.92
TRAPPC4-214ENST00000533632 PLCH2O75038 1416 aa20.82■□□□□ 0.92
TRAPPC4-214ENST00000533632 KDM6BO15054 1643 aa20.82■□□□□ 0.92
TRAPPC4-214ENST00000533632 PREX2Q70Z35 1606 aa20.81■□□□□ 0.92
TRAPPC4-214ENST00000533632 ARAP3Q8WWN8 1544 aa20.81■□□□□ 0.92
TRAPPC4-214ENST00000533632 NEO1Q92859 1461 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms