RNA–Protein interactions for RNA: ENST00000533214.1

SNX19-211, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-211ENST00000533214 ARID3CA6NKF2 412 aa20.52■□□□□ 0.87
SNX19-211ENST00000533214 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
SNX19-211ENST00000533214 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
SNX19-211ENST00000533214 PHLDB1Q86UU1 1377 aa20.47■□□□□ 0.87
SNX19-211ENST00000533214 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
SNX19-211ENST00000533214 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
SNX19-211ENST00000533214 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
SNX19-211ENST00000533214 RRBP1Q9P2E9 1410 aaKnown RBP20.44■□□□□ 0.86
SNX19-211ENST00000533214 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
SNX19-211ENST00000533214 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
SNX19-211ENST00000533214 BCANQ96GW7 911 aa20.4■□□□□ 0.86
SNX19-211ENST00000533214 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
SNX19-211ENST00000533214 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
SNX19-211ENST00000533214 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
SNX19-211ENST00000533214 LRRC9Q6ZRR7 1453 aa20.35■□□□□ 0.85
SNX19-211ENST00000533214 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
SNX19-211ENST00000533214 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
SNX19-211ENST00000533214 MYT1Q01538 1121 aa20.31■□□□□ 0.84
SNX19-211ENST00000533214 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
SNX19-211ENST00000533214 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
SNX19-211ENST00000533214 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
SNX19-211ENST00000533214 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
SNX19-211ENST00000533214 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
SNX19-211ENST00000533214 MTUS2Q5JR59 1369 aa20.22■□□□□ 0.83
SNX19-211ENST00000533214 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
SNX19-211ENST00000533214 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNX19-211ENST00000533214 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
SNX19-211ENST00000533214 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
SNX19-211ENST00000533214 MAPKBP1O60336 1514 aa20.18■□□□□ 0.82
SNX19-211ENST00000533214 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
SNX19-211ENST00000533214 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
SNX19-211ENST00000533214 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
SNX19-211ENST00000533214 FKBP8Q14318 412 aa20.13■□□□□ 0.81
SNX19-211ENST00000533214 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
SNX19-211ENST00000533214 CASKIN1Q8WXD9 1431 aa20.13■□□□□ 0.81
SNX19-211ENST00000533214 LAMC3Q9Y6N6 1575 aa20.12■□□□□ 0.81
SNX19-211ENST00000533214 PTPRKQ15262 1439 aa20.09■□□□□ 0.81
SNX19-211ENST00000533214 FYCO1Q9BQS8 1478 aa20.09■□□□□ 0.81
SNX19-211ENST00000533214 FBLN2P98095 1184 aa20.08■□□□□ 0.81
SNX19-211ENST00000533214 WDR97A6NE52 1622 aa20.08■□□□□ 0.8
SNX19-211ENST00000533214 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
SNX19-211ENST00000533214 FMN1Q68DA7 1419 aa20.07■□□□□ 0.8
SNX19-211ENST00000533214 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
SNX19-211ENST00000533214 CUL7Q14999 1698 aa20.06■□□□□ 0.8
SNX19-211ENST00000533214 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
SNX19-211ENST00000533214 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
SNX19-211ENST00000533214 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
SNX19-211ENST00000533214 FOXD1Q16676 465 aa20.03■□□□□ 0.8
SNX19-211ENST00000533214 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
SNX19-211ENST00000533214 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.8
SNX19-211ENST00000533214 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
SNX19-211ENST00000533214 NCOA2Q15596 1464 aa20■□□□□ 0.79
SNX19-211ENST00000533214 LRRIQ1Q96JM4 1722 aa20■□□□□ 0.79
SNX19-211ENST00000533214 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
SNX19-211ENST00000533214 MAGI3Q5TCQ9 1506 aa19.95■□□□□ 0.78
SNX19-211ENST00000533214 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
SNX19-211ENST00000533214 PPP1R15AO75807 674 aaPredicted RBP19.94■□□□□ 0.78
SNX19-211ENST00000533214 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
SNX19-211ENST00000533214 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
SNX19-211ENST00000533214 TONSLQ96HA7 1378 aa19.93■□□□□ 0.78
SNX19-211ENST00000533214 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
SNX19-211ENST00000533214 MYOM3Q5VTT5 1437 aa19.91■□□□□ 0.78
SNX19-211ENST00000533214 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
SNX19-211ENST00000533214 SAMD9Q5K651 1589 aa19.89■□□□□ 0.78
SNX19-211ENST00000533214 ANP32EQ9BTT0 268 aa19.89■□□□□ 0.77
SNX19-211ENST00000533214 NEFLP07196 543 aa19.88■□□□□ 0.77
SNX19-211ENST00000533214 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
SNX19-211ENST00000533214 NAIPQ13075 1403 aa19.87■□□□□ 0.77
SNX19-211ENST00000533214 ANP32CO43423 234 aa19.85■□□□□ 0.77
SNX19-211ENST00000533214 CNGB1Q14028 1251 aaPredicted RBP19.85■□□□□ 0.77
SNX19-211ENST00000533214 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.77
SNX19-211ENST00000533214 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.76
SNX19-211ENST00000533214 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
SNX19-211ENST00000533214 HFM1A2PYH4 1435 aa19.82■□□□□ 0.76
SNX19-211ENST00000533214 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
SNX19-211ENST00000533214 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
SNX19-211ENST00000533214 PTPN23Q9H3S7 1636 aa19.8■□□□□ 0.76
SNX19-211ENST00000533214 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
SNX19-211ENST00000533214 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
SNX19-211ENST00000533214 SUPT6HQ7KZ85 1726 aaKnown RBP19.79■□□□□ 0.76
SNX19-211ENST00000533214 RBM19Q9Y4C8 960 aaKnown RBP19.79■□□□□ 0.76
SNX19-211ENST00000533214 UACAQ9BZF9 1416 aa19.78■□□□□ 0.76
SNX19-211ENST00000533214 KDM6BO15054 1643 aa19.78■□□□□ 0.76
SNX19-211ENST00000533214 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
SNX19-211ENST00000533214 EHBP1L1Q8N3D4 1523 aa19.76■□□□□ 0.75
SNX19-211ENST00000533214 UGGT2Q9NYU1 1516 aa19.75■□□□□ 0.75
SNX19-211ENST00000533214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNX19-211ENST00000533214 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
SNX19-211ENST00000533214 HNRNPUQ00839 825 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNX19-211ENST00000533214 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
SNX19-211ENST00000533214 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
SNX19-211ENST00000533214 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
SNX19-211ENST00000533214 HSPA5P11021 654 aaKnown RBP19.69■□□□□ 0.74
SNX19-211ENST00000533214 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
SNX19-211ENST00000533214 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
SNX19-211ENST00000533214 POLR3GLQ9BT43 218 aa19.67■□□□□ 0.74
SNX19-211ENST00000533214 SLC4A1APQ9BWU0 796 aaKnown RBP19.67■□□□□ 0.74
SNX19-211ENST00000533214 DISP1Q96F81 1524 aa19.66■□□□□ 0.74
SNX19-211ENST00000533214 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
SNX19-211ENST00000533214 TIMELESSQ9UNS1 1208 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms