RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
LTBP3-221ENST00000532932 SETD5Q9C0A6 1442 aa20.85■□□□□ 0.93
LTBP3-221ENST00000532932 MAPKBP1O60336 1514 aa20.85■□□□□ 0.93
LTBP3-221ENST00000532932 ARHGAP35Q9NRY4 1499 aa20.85■□□□□ 0.93
LTBP3-221ENST00000532932 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
LTBP3-221ENST00000532932 PPP1R15AO75807 674 aaPredicted RBP20.84■□□□□ 0.93
LTBP3-221ENST00000532932 P3H3Q8IVL6 736 aa20.84■□□□□ 0.93
LTBP3-221ENST00000532932 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
LTBP3-221ENST00000532932 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
LTBP3-221ENST00000532932 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
LTBP3-221ENST00000532932 CCER2I3L3R5 266 aa20.75■□□□□ 0.91
LTBP3-221ENST00000532932 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
LTBP3-221ENST00000532932 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
LTBP3-221ENST00000532932 ERICH6Q7L0X2 663 aa20.73■□□□□ 0.91
LTBP3-221ENST00000532932 CUX1P39880 1505 aa20.73■□□□□ 0.91
LTBP3-221ENST00000532932 HNRNPUQ00839 825 aaKnown RBP eCLIP20.71■□□□□ 0.91
LTBP3-221ENST00000532932 MSH5O43196 834 aa20.7■□□□□ 0.9
LTBP3-221ENST00000532932 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
LTBP3-221ENST00000532932 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
LTBP3-221ENST00000532932 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
LTBP3-221ENST00000532932 TIAM1Q13009 1591 aa20.64■□□□□ 0.89
LTBP3-221ENST00000532932 LRRC9Q6ZRR7 1453 aa20.64■□□□□ 0.89
LTBP3-221ENST00000532932 TIMELESSQ9UNS1 1208 aa20.63■□□□□ 0.89
LTBP3-221ENST00000532932 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
LTBP3-221ENST00000532932 IGF1RP08069 1367 aa20.6■□□□□ 0.89
LTBP3-221ENST00000532932 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
LTBP3-221ENST00000532932 CFTRP13569 1480 aa20.55■□□□□ 0.88
LTBP3-221ENST00000532932 NESP48681 1621 aa20.55■□□□□ 0.88
LTBP3-221ENST00000532932 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
LTBP3-221ENST00000532932 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
LTBP3-221ENST00000532932 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
LTBP3-221ENST00000532932 MAP3K1Q13233 1512 aa20.47■□□□□ 0.87
LTBP3-221ENST00000532932 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
LTBP3-221ENST00000532932 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
LTBP3-221ENST00000532932 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
LTBP3-221ENST00000532932 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
LTBP3-221ENST00000532932 PCF11O94913 1555 aaKnown RBP20.41■□□□□ 0.86
LTBP3-221ENST00000532932 CCDC184Q52MB2 194 aa20.41■□□□□ 0.86
LTBP3-221ENST00000532932 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
LTBP3-221ENST00000532932 PPP4R2Q9NY27 417 aa20.41■□□□□ 0.86
LTBP3-221ENST00000532932 CCDC18Q5T9S5 1454 aa20.4■□□□□ 0.86
LTBP3-221ENST00000532932 CHIC2Q9UKJ5 165 aa20.38■□□□□ 0.85
LTBP3-221ENST00000532932 WASHC2AQ641Q2 1341 aa20.38■□□□□ 0.85
LTBP3-221ENST00000532932 MTUS2Q5JR59 1369 aa20.38■□□□□ 0.85
LTBP3-221ENST00000532932 RRP7BPQ9NSQ0 103 aa20.37■□□□□ 0.85
LTBP3-221ENST00000532932 MRS2Q9HD23 443 aa20.35■□□□□ 0.85
LTBP3-221ENST00000532932 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
LTBP3-221ENST00000532932 FGD6Q6ZV73 1430 aa20.34■□□□□ 0.85
LTBP3-221ENST00000532932 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.84
LTBP3-221ENST00000532932 NBR1Q14596 966 aa20.32■□□□□ 0.84
LTBP3-221ENST00000532932 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
LTBP3-221ENST00000532932 PTPRKQ15262 1439 aa20.32■□□□□ 0.84
LTBP3-221ENST00000532932 DEKP35659 375 aaKnown RBP20.3■□□□□ 0.84
LTBP3-221ENST00000532932 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
LTBP3-221ENST00000532932 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
LTBP3-221ENST00000532932 SENP3-EIF4A1A0A087X0R7 540 aa20.28■□□□□ 0.84
LTBP3-221ENST00000532932 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.849e-8■■■■□ 21.2
LTBP3-221ENST00000532932 CASKIN1Q8WXD9 1431 aa20.26■□□□□ 0.83
LTBP3-221ENST00000532932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.26■□□□□ 0.83
LTBP3-221ENST00000532932 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
LTBP3-221ENST00000532932 FOXD1Q16676 465 aa20.26■□□□□ 0.83
LTBP3-221ENST00000532932 ERICH6BQ5W0A0 696 aa20.26■□□□□ 0.83
LTBP3-221ENST00000532932 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
LTBP3-221ENST00000532932 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
LTBP3-221ENST00000532932 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
LTBP3-221ENST00000532932 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-221ENST00000532932 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
LTBP3-221ENST00000532932 NAIPQ13075 1403 aa20.23■□□□□ 0.83
LTBP3-221ENST00000532932 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
LTBP3-221ENST00000532932 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
LTBP3-221ENST00000532932 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
LTBP3-221ENST00000532932 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
LTBP3-221ENST00000532932 ARID3CA6NKF2 412 aa20.19■□□□□ 0.82
LTBP3-221ENST00000532932 PAK3O75914 559 aaPredicted RBP20.19■□□□□ 0.82
LTBP3-221ENST00000532932 CNTLNQ9NXG0 1405 aa20.18■□□□□ 0.82
LTBP3-221ENST00000532932 PDS5BQ9NTI5 1447 aa20.17■□□□□ 0.82
LTBP3-221ENST00000532932 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
LTBP3-221ENST00000532932 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
LTBP3-221ENST00000532932 NCOA2Q15596 1464 aa20.14■□□□□ 0.82
LTBP3-221ENST00000532932 MYOM3Q5VTT5 1437 aa20.13■□□□□ 0.81
LTBP3-221ENST00000532932 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
LTBP3-221ENST00000532932 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
LTBP3-221ENST00000532932 MPHOSPH9Q99550 1183 aa20.13■□□□□ 0.81
LTBP3-221ENST00000532932 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
LTBP3-221ENST00000532932 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
LTBP3-221ENST00000532932 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
LTBP3-221ENST00000532932 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
LTBP3-221ENST00000532932 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
LTBP3-221ENST00000532932 NBPF8Q3BBV2 869 aa20.08■□□□□ 0.8
LTBP3-221ENST00000532932 ZNF326Q5BKZ1 582 aaKnown RBP20.08■□□□□ 0.8
LTBP3-221ENST00000532932 AKNAQ7Z591 1439 aa20.07■□□□□ 0.8
LTBP3-221ENST00000532932 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
LTBP3-221ENST00000532932 FBLN2P98095 1184 aa20.06■□□□□ 0.8
LTBP3-221ENST00000532932 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
LTBP3-221ENST00000532932 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
LTBP3-221ENST00000532932 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
LTBP3-221ENST00000532932 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
LTBP3-221ENST00000532932 NPM2Q86SE8 214 aaKnown RBP20.03■□□□□ 0.8
LTBP3-221ENST00000532932 NCOA1Q15788 1441 aa20.02■□□□□ 0.8
LTBP3-221ENST00000532932 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms