RNA–Protein interactions for RNA: ENST00000532834.2

SDHCP4-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 4, humanhuman

BASIC

Gene SDHCP4, Length 510 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP4-201ENST00000532834 PDS5BQ9NTI5 1447 aa12.37□□□□□ -0.43
SDHCP4-201ENST00000532834 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
SDHCP4-201ENST00000532834 KIF27Q86VH2 1401 aa12.35□□□□□ -0.43
SDHCP4-201ENST00000532834 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
SDHCP4-201ENST00000532834 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
SDHCP4-201ENST00000532834 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
SDHCP4-201ENST00000532834 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
SDHCP4-201ENST00000532834 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
SDHCP4-201ENST00000532834 FANCD2Q9BXW9 1451 aa12.29□□□□□ -0.44
SDHCP4-201ENST00000532834 RAPGEF2Q9Y4G8 1499 aa12.29□□□□□ -0.44
SDHCP4-201ENST00000532834 CLIP1P30622 1438 aa12.28□□□□□ -0.44
SDHCP4-201ENST00000532834 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
SDHCP4-201ENST00000532834 VPS8Q8N3P4 1428 aa12.26□□□□□ -0.45
SDHCP4-201ENST00000532834 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
SDHCP4-201ENST00000532834 ZBTB22O15209 634 aa12.24□□□□□ -0.45
SDHCP4-201ENST00000532834 UBTFP17480 764 aaKnown RBP12.24□□□□□ -0.45
SDHCP4-201ENST00000532834 WDR62O43379 1518 aa12.23□□□□□ -0.45
SDHCP4-201ENST00000532834 ABCB7O75027 752 aa12.22□□□□□ -0.45
SDHCP4-201ENST00000532834 CUL7Q14999 1698 aa12.22□□□□□ -0.45
SDHCP4-201ENST00000532834 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
SDHCP4-201ENST00000532834 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.45
SDHCP4-201ENST00000532834 ZEB1P37275 1124 aaPredicted RBP12.21□□□□□ -0.45
SDHCP4-201ENST00000532834 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
SDHCP4-201ENST00000532834 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
SDHCP4-201ENST00000532834 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
SDHCP4-201ENST00000532834 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
SDHCP4-201ENST00000532834 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
SDHCP4-201ENST00000532834 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
SDHCP4-201ENST00000532834 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
SDHCP4-201ENST00000532834 IGF1RP08069 1367 aa12.11□□□□□ -0.47
SDHCP4-201ENST00000532834 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
SDHCP4-201ENST00000532834 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
SDHCP4-201ENST00000532834 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
SDHCP4-201ENST00000532834 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
SDHCP4-201ENST00000532834 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
SDHCP4-201ENST00000532834 POLA2Q14181 598 aa12.06□□□□□ -0.48
SDHCP4-201ENST00000532834 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
SDHCP4-201ENST00000532834 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
SDHCP4-201ENST00000532834 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
SDHCP4-201ENST00000532834 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.49
SDHCP4-201ENST00000532834 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.49
SDHCP4-201ENST00000532834 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
SDHCP4-201ENST00000532834 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
SDHCP4-201ENST00000532834 TIAM1Q13009 1591 aa11.98□□□□□ -0.49
SDHCP4-201ENST00000532834 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
SDHCP4-201ENST00000532834 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
SDHCP4-201ENST00000532834 SAMD9Q5K651 1589 aa11.97□□□□□ -0.49
SDHCP4-201ENST00000532834 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
SDHCP4-201ENST00000532834 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
SDHCP4-201ENST00000532834 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
SDHCP4-201ENST00000532834 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
SDHCP4-201ENST00000532834 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
SDHCP4-201ENST00000532834 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
SDHCP4-201ENST00000532834 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
SDHCP4-201ENST00000532834 PPARGC1BQ86YN6 1023 aaKnown RBP11.91□□□□□ -0.5
SDHCP4-201ENST00000532834 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
SDHCP4-201ENST00000532834 GRIN2BQ13224 1484 aa11.89□□□□□ -0.51
SDHCP4-201ENST00000532834 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
SDHCP4-201ENST00000532834 LRRC9Q6ZRR7 1453 aa11.88□□□□□ -0.51
SDHCP4-201ENST00000532834 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
SDHCP4-201ENST00000532834 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
SDHCP4-201ENST00000532834 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
SDHCP4-201ENST00000532834 TDRD9Q8NDG6 1382 aaKnown RBP11.84□□□□□ -0.51
SDHCP4-201ENST00000532834 CLSPNQ9HAW4 1339 aa11.84□□□□□ -0.51
SDHCP4-201ENST00000532834 CCNB3Q8WWL7 1395 aa11.83□□□□□ -0.52
SDHCP4-201ENST00000532834 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
SDHCP4-201ENST00000532834 CCDC18Q5T9S5 1454 aa11.82□□□□□ -0.52
SDHCP4-201ENST00000532834 MAGI1Q96QZ7 1491 aaPredicted RBP11.82□□□□□ -0.52
SDHCP4-201ENST00000532834 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
SDHCP4-201ENST00000532834 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
SDHCP4-201ENST00000532834 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
SDHCP4-201ENST00000532834 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
SDHCP4-201ENST00000532834 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
SDHCP4-201ENST00000532834 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
SDHCP4-201ENST00000532834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
SDHCP4-201ENST00000532834 CHD1O14646 1710 aa11.8□□□□□ -0.52
SDHCP4-201ENST00000532834 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
SDHCP4-201ENST00000532834 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
SDHCP4-201ENST00000532834 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
SDHCP4-201ENST00000532834 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
SDHCP4-201ENST00000532834 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
SDHCP4-201ENST00000532834 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
SDHCP4-201ENST00000532834 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
SDHCP4-201ENST00000532834 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
SDHCP4-201ENST00000532834 FBLN2P98095 1184 aa11.75□□□□□ -0.53
SDHCP4-201ENST00000532834 GRIN2AQ12879 1464 aa11.75□□□□□ -0.53
SDHCP4-201ENST00000532834 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
SDHCP4-201ENST00000532834 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
SDHCP4-201ENST00000532834 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
SDHCP4-201ENST00000532834 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
SDHCP4-201ENST00000532834 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
SDHCP4-201ENST00000532834 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
SDHCP4-201ENST00000532834 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
SDHCP4-201ENST00000532834 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
SDHCP4-201ENST00000532834 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
SDHCP4-201ENST00000532834 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
SDHCP4-201ENST00000532834 NCOA2Q15596 1464 aa11.66□□□□□ -0.54
SDHCP4-201ENST00000532834 NUP160Q12769 1436 aa11.66□□□□□ -0.54
SDHCP4-201ENST00000532834 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
SDHCP4-201ENST00000532834 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms