RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
PPFIA1-223ENST00000532793 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-223ENST00000532793 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
PPFIA1-223ENST00000532793 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
PPFIA1-223ENST00000532793 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
PPFIA1-223ENST00000532793 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
PPFIA1-223ENST00000532793 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
PPFIA1-223ENST00000532793 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
PPFIA1-223ENST00000532793 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
PPFIA1-223ENST00000532793 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
PPFIA1-223ENST00000532793 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
PPFIA1-223ENST00000532793 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
PPFIA1-223ENST00000532793 NPM3O75607 178 aaKnown RBP17.15■□□□□ 0.34
PPFIA1-223ENST00000532793 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
PPFIA1-223ENST00000532793 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
PPFIA1-223ENST00000532793 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
PPFIA1-223ENST00000532793 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
PPFIA1-223ENST00000532793 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
PPFIA1-223ENST00000532793 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
PPFIA1-223ENST00000532793 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
PPFIA1-223ENST00000532793 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
PPFIA1-223ENST00000532793 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
PPFIA1-223ENST00000532793 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
PPFIA1-223ENST00000532793 ABCB7O75027 752 aa16.94■□□□□ 0.3
PPFIA1-223ENST00000532793 NUP160Q12769 1436 aa16.91■□□□□ 0.3
PPFIA1-223ENST00000532793 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
PPFIA1-223ENST00000532793 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
PPFIA1-223ENST00000532793 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
PPFIA1-223ENST00000532793 CUL7Q14999 1698 aa16.78■□□□□ 0.28
PPFIA1-223ENST00000532793 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
PPFIA1-223ENST00000532793 KIF27Q86VH2 1401 aa16.77■□□□□ 0.27
PPFIA1-223ENST00000532793 CHRDL2Q6WN34 429 aa16.75■□□□□ 0.27
PPFIA1-223ENST00000532793 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
PPFIA1-223ENST00000532793 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
PPFIA1-223ENST00000532793 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
PPFIA1-223ENST00000532793 NPM1P06748 294 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPFIA1-223ENST00000532793 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
PPFIA1-223ENST00000532793 KIAA0586Q9BVV6 1533 aa16.67■□□□□ 0.26
PPFIA1-223ENST00000532793 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
PPFIA1-223ENST00000532793 IGF1RP08069 1367 aa16.66■□□□□ 0.26
PPFIA1-223ENST00000532793 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
PPFIA1-223ENST00000532793 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
PPFIA1-223ENST00000532793 ADCY10Q96PN6 1610 aa16.59■□□□□ 0.25
PPFIA1-223ENST00000532793 MAPKBP1O60336 1514 aa16.58■□□□□ 0.24
PPFIA1-223ENST00000532793 CARMIL2Q6F5E8 1435 aa16.57■□□□□ 0.24
PPFIA1-223ENST00000532793 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
PPFIA1-223ENST00000532793 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
PPFIA1-223ENST00000532793 TTBK1Q5TCY1 1321 aaPredicted RBP16.54■□□□□ 0.24
PPFIA1-223ENST00000532793 FAM69CQ0P6D2 419 aa16.54■□□□□ 0.24
PPFIA1-223ENST00000532793 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
PPFIA1-223ENST00000532793 PTPRGP23470 1445 aa16.53■□□□□ 0.24
PPFIA1-223ENST00000532793 APLP2Q06481 763 aa16.52■□□□□ 0.24
PPFIA1-223ENST00000532793 TSPOAP1O95153 1857 aa16.51■□□□□ 0.23
PPFIA1-223ENST00000532793 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
PPFIA1-223ENST00000532793 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
PPFIA1-223ENST00000532793 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
PPFIA1-223ENST00000532793 KDM6BO15054 1643 aa16.45■□□□□ 0.22
PPFIA1-223ENST00000532793 ABCC2Q92887 1545 aa16.44■□□□□ 0.22
PPFIA1-223ENST00000532793 KIAA0556O60303 1618 aa16.41■□□□□ 0.22
PPFIA1-223ENST00000532793 UGGT2Q9NYU1 1516 aa16.4■□□□□ 0.22
PPFIA1-223ENST00000532793 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
PPFIA1-223ENST00000532793 DISP1Q96F81 1524 aa16.4■□□□□ 0.22
PPFIA1-223ENST00000532793 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
PPFIA1-223ENST00000532793 PLB1Q6P1J6 1458 aa16.39■□□□□ 0.21
PPFIA1-223ENST00000532793 ASXL2Q76L83 1435 aa16.37■□□□□ 0.21
PPFIA1-223ENST00000532793 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
PPFIA1-223ENST00000532793 GLI2P10070 1586 aa16.34■□□□□ 0.21
PPFIA1-223ENST00000532793 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
PPFIA1-223ENST00000532793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
PPFIA1-223ENST00000532793 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
PPFIA1-223ENST00000532793 KDM5BQ9UGL1 1544 aa16.32■□□□□ 0.2
PPFIA1-223ENST00000532793 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
PPFIA1-223ENST00000532793 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
PPFIA1-223ENST00000532793 MAP3K4Q9Y6R4 1608 aa16.28■□□□□ 0.2
PPFIA1-223ENST00000532793 EPRSP07814 1512 aaKnown RBP16.27■□□□□ 0.2
PPFIA1-223ENST00000532793 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
PPFIA1-223ENST00000532793 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
PPFIA1-223ENST00000532793 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
PPFIA1-223ENST00000532793 WDR7Q9Y4E6 1490 aa16.23■□□□□ 0.19
PPFIA1-223ENST00000532793 ABCA8O94911 1581 aa16.21■□□□□ 0.19
PPFIA1-223ENST00000532793 POLA2Q14181 598 aa16.21■□□□□ 0.19
PPFIA1-223ENST00000532793 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
PPFIA1-223ENST00000532793 PIP4P2Q8N4L2 257 aa16.19■□□□□ 0.18
PPFIA1-223ENST00000532793 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
PPFIA1-223ENST00000532793 EEA1Q15075 1411 aa16.16■□□□□ 0.18
PPFIA1-223ENST00000532793 KCNH8Q96L42 1107 aa16.15■□□□□ 0.18
PPFIA1-223ENST00000532793 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
PPFIA1-223ENST00000532793 CD109Q6YHK3 1445 aa16.13■□□□□ 0.17
PPFIA1-223ENST00000532793 SAMD9Q5K651 1589 aa16.13■□□□□ 0.17
PPFIA1-223ENST00000532793 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
PPFIA1-223ENST00000532793 RAPGEF6Q8TEU7 1601 aa16.11■□□□□ 0.17
PPFIA1-223ENST00000532793 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
PPFIA1-223ENST00000532793 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
PPFIA1-223ENST00000532793 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
PPFIA1-223ENST00000532793 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
PPFIA1-223ENST00000532793 HAX1O00165 279 aa16.09■□□□□ 0.17
PPFIA1-223ENST00000532793 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
PPFIA1-223ENST00000532793 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-223ENST00000532793 ATP10BO94823 1461 aa16.05■□□□□ 0.16
PPFIA1-223ENST00000532793 KIF21BO75037 1637 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms