RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
TRIM49-202ENST00000532501 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
TRIM49-202ENST00000532501 GRIN2BQ13224 1484 aa13.53□□□□□ -0.24
TRIM49-202ENST00000532501 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
TRIM49-202ENST00000532501 IGF1RP08069 1367 aa13.51□□□□□ -0.25
TRIM49-202ENST00000532501 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
TRIM49-202ENST00000532501 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
TRIM49-202ENST00000532501 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
TRIM49-202ENST00000532501 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.26
TRIM49-202ENST00000532501 FAM9AQ8IZU1 332 aaPredicted RBP13.46□□□□□ -0.26
TRIM49-202ENST00000532501 ABCB7O75027 752 aa13.43□□□□□ -0.26
TRIM49-202ENST00000532501 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
TRIM49-202ENST00000532501 FHAD1B1AJZ9 1412 aa13.42□□□□□ -0.26
TRIM49-202ENST00000532501 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
TRIM49-202ENST00000532501 FBLN2P98095 1184 aa13.4□□□□□ -0.26
TRIM49-202ENST00000532501 CHD1O14646 1710 aa13.39□□□□□ -0.27
TRIM49-202ENST00000532501 CARMIL1Q5VZK9 1371 aa13.39□□□□□ -0.27
TRIM49-202ENST00000532501 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
TRIM49-202ENST00000532501 PRXQ9BXM0 1461 aa13.38□□□□□ -0.27
TRIM49-202ENST00000532501 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
TRIM49-202ENST00000532501 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
TRIM49-202ENST00000532501 CHRDL2Q6WN34 429 aa13.36□□□□□ -0.27
TRIM49-202ENST00000532501 EEA1Q15075 1411 aa13.35□□□□□ -0.27
TRIM49-202ENST00000532501 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
TRIM49-202ENST00000532501 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
TRIM49-202ENST00000532501 CEP170Q5SW79 1584 aa13.35□□□□□ -0.27
TRIM49-202ENST00000532501 CUL7Q14999 1698 aa13.35□□□□□ -0.27
TRIM49-202ENST00000532501 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
TRIM49-202ENST00000532501 NUP160Q12769 1436 aa13.34□□□□□ -0.27
TRIM49-202ENST00000532501 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
TRIM49-202ENST00000532501 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
TRIM49-202ENST00000532501 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
TRIM49-202ENST00000532501 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
TRIM49-202ENST00000532501 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
TRIM49-202ENST00000532501 KIF21BO75037 1637 aa13.25□□□□□ -0.29
TRIM49-202ENST00000532501 APLP2Q06481 763 aa13.23□□□□□ -0.29
TRIM49-202ENST00000532501 ERCC6L2Q5T890 1561 aa13.23□□□□□ -0.29
TRIM49-202ENST00000532501 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
TRIM49-202ENST00000532501 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
TRIM49-202ENST00000532501 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
TRIM49-202ENST00000532501 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
TRIM49-202ENST00000532501 IQGAP2Q13576 1575 aa13.17□□□□□ -0.3
TRIM49-202ENST00000532501 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
TRIM49-202ENST00000532501 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
TRIM49-202ENST00000532501 PRG4Q92954 1404 aaPredicted RBP13.15□□□□□ -0.31
TRIM49-202ENST00000532501 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
TRIM49-202ENST00000532501 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
TRIM49-202ENST00000532501 RIMBP3CA6NJZ7 1639 aa13.13□□□□□ -0.31
TRIM49-202ENST00000532501 RIMBP3BA6NNM3 1639 aa13.13□□□□□ -0.31
TRIM49-202ENST00000532501 RIMBP3Q9UFD9 1639 aa13.13□□□□□ -0.31
TRIM49-202ENST00000532501 CTTNBP2Q8WZ74 1663 aa13.12□□□□□ -0.31
TRIM49-202ENST00000532501 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
TRIM49-202ENST00000532501 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
TRIM49-202ENST00000532501 RANGAP1P46060 587 aaPredicted RBP13.11□□□□□ -0.31
TRIM49-202ENST00000532501 TNIKQ9UKE5 1360 aa13.08□□□□□ -0.32
TRIM49-202ENST00000532501 KIAA0556O60303 1618 aa13.06□□□□□ -0.32
TRIM49-202ENST00000532501 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
TRIM49-202ENST00000532501 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
TRIM49-202ENST00000532501 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
TRIM49-202ENST00000532501 FHOD3Q2V2M9 1422 aa13.04□□□□□ -0.32
TRIM49-202ENST00000532501 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
TRIM49-202ENST00000532501 CYB5RLQ6IPT4 315 aa13.01□□□□□ -0.33
TRIM49-202ENST00000532501 CEP162Q5TB80 1403 aa13.01□□□□□ -0.33
TRIM49-202ENST00000532501 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
TRIM49-202ENST00000532501 CLIP1P30622 1438 aa12.99□□□□□ -0.33
TRIM49-202ENST00000532501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
TRIM49-202ENST00000532501 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
TRIM49-202ENST00000532501 PTPRGP23470 1445 aa12.99□□□□□ -0.33
TRIM49-202ENST00000532501 EFCAB5A4FU69 1503 aa12.97□□□□□ -0.33
TRIM49-202ENST00000532501 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
TRIM49-202ENST00000532501 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
TRIM49-202ENST00000532501 ADCY10Q96PN6 1610 aa12.93□□□□□ -0.34
TRIM49-202ENST00000532501 ABCA8O94911 1581 aa12.92□□□□□ -0.34
TRIM49-202ENST00000532501 HAX1O00165 279 aa12.91□□□□□ -0.34
TRIM49-202ENST00000532501 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
TRIM49-202ENST00000532501 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
TRIM49-202ENST00000532501 ABCC2Q92887 1545 aa12.89□□□□□ -0.35
TRIM49-202ENST00000532501 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
TRIM49-202ENST00000532501 PCF11O94913 1555 aaKnown RBP12.87□□□□□ -0.35
TRIM49-202ENST00000532501 UHRF1BP1LA0JNW5 1464 aa12.87□□□□□ -0.35
TRIM49-202ENST00000532501 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
TRIM49-202ENST00000532501 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
TRIM49-202ENST00000532501 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
TRIM49-202ENST00000532501 CDK13Q14004 1512 aaKnown RBP12.84□□□□□ -0.35
TRIM49-202ENST00000532501 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
TRIM49-202ENST00000532501 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
TRIM49-202ENST00000532501 ATP10BO94823 1461 aa12.83□□□□□ -0.36
TRIM49-202ENST00000532501 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
TRIM49-202ENST00000532501 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
TRIM49-202ENST00000532501 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
TRIM49-202ENST00000532501 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
TRIM49-202ENST00000532501 POLA2Q14181 598 aa12.79□□□□□ -0.36
TRIM49-202ENST00000532501 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
TRIM49-202ENST00000532501 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
TRIM49-202ENST00000532501 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
TRIM49-202ENST00000532501 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
TRIM49-202ENST00000532501 ASXL2Q76L83 1435 aa12.77□□□□□ -0.37
TRIM49-202ENST00000532501 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
TRIM49-202ENST00000532501 MAGI3Q5TCQ9 1506 aa12.76□□□□□ -0.37
TRIM49-202ENST00000532501 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms