RNA–Protein interactions for RNA: ENST00000532474.5

RCN1-208, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-208ENST00000532474 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
RCN1-208ENST00000532474 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
RCN1-208ENST00000532474 CFTRP13569 1480 aa11.25□□□□□ -0.61
RCN1-208ENST00000532474 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
RCN1-208ENST00000532474 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
RCN1-208ENST00000532474 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
RCN1-208ENST00000532474 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
RCN1-208ENST00000532474 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
RCN1-208ENST00000532474 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
RCN1-208ENST00000532474 WDR62O43379 1518 aa11.17□□□□□ -0.62
RCN1-208ENST00000532474 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
RCN1-208ENST00000532474 CCDC88BA6NC98 1476 aa11.15□□□□□ -0.62
RCN1-208ENST00000532474 HAX1O00165 279 aa11.12□□□□□ -0.63
RCN1-208ENST00000532474 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
RCN1-208ENST00000532474 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
RCN1-208ENST00000532474 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
RCN1-208ENST00000532474 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
RCN1-208ENST00000532474 IFT140Q96RY7 1462 aa11□□□□□ -0.65
RCN1-208ENST00000532474 SPDYE4A6NLX3 237 aa10.99□□□□□ -0.65
RCN1-208ENST00000532474 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
RCN1-208ENST00000532474 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
RCN1-208ENST00000532474 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.65
RCN1-208ENST00000532474 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
RCN1-208ENST00000532474 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
RCN1-208ENST00000532474 PRDM2Q13029 1718 aa10.94□□□□□ -0.66
RCN1-208ENST00000532474 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
RCN1-208ENST00000532474 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.66
RCN1-208ENST00000532474 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
RCN1-208ENST00000532474 EVX2Q03828 476 aa10.88□□□□□ -0.67
RCN1-208ENST00000532474 SOGA1O94964 1423 aa10.87□□□□□ -0.67
RCN1-208ENST00000532474 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
RCN1-208ENST00000532474 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
RCN1-208ENST00000532474 FGD5Q6ZNL6 1462 aa10.83□□□□□ -0.68
RCN1-208ENST00000532474 RAD54L2Q9Y4B4 1467 aa10.82□□□□□ -0.68
RCN1-208ENST00000532474 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
RCN1-208ENST00000532474 TARBP1Q13395 1621 aaKnown RBP10.82□□□□□ -0.68
RCN1-208ENST00000532474 CUX1P39880 1505 aa10.82□□□□□ -0.68
RCN1-208ENST00000532474 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
RCN1-208ENST00000532474 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
RCN1-208ENST00000532474 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
RCN1-208ENST00000532474 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
RCN1-208ENST00000532474 CREBZFQ9NS37 354 aa10.76□□□□□ -0.69
RCN1-208ENST00000532474 WRNQ14191 1432 aaPredicted RBP eCLIP10.75□□□□□ -0.69
RCN1-208ENST00000532474 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
RCN1-208ENST00000532474 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
RCN1-208ENST00000532474 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
RCN1-208ENST00000532474 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
RCN1-208ENST00000532474 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
RCN1-208ENST00000532474 GAPVD1Q14C86 1478 aa10.73□□□□□ -0.69
RCN1-208ENST00000532474 GABBR2O75899 941 aa10.72□□□□□ -0.69
RCN1-208ENST00000532474 SYNJ2O15056 1496 aa10.71□□□□□ -0.69
RCN1-208ENST00000532474 ARHGEF11O15085 1522 aa10.71□□□□□ -0.69
RCN1-208ENST00000532474 CLCN6P51797 869 aa10.71□□□□□ -0.69
RCN1-208ENST00000532474 PROM2Q8N271 834 aa10.71□□□□□ -0.69
RCN1-208ENST00000532474 TOP2BQ02880 1626 aa10.67□□□□□ -0.7
RCN1-208ENST00000532474 CYB5RLQ6IPT4 315 aa10.67□□□□□ -0.7
RCN1-208ENST00000532474 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
RCN1-208ENST00000532474 RIMBP3CA6NJZ7 1639 aa10.66□□□□□ -0.7
RCN1-208ENST00000532474 RIMBP3BA6NNM3 1639 aa10.66□□□□□ -0.7
RCN1-208ENST00000532474 RIMBP3Q9UFD9 1639 aa10.66□□□□□ -0.7
RCN1-208ENST00000532474 SYNJ1O43426 1573 aa10.65□□□□□ -0.7
RCN1-208ENST00000532474 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
RCN1-208ENST00000532474 BIVM-ERCC5R4GMW8 1640 aa10.63□□□□□ -0.71
RCN1-208ENST00000532474 CHD1O14646 1710 aa10.63□□□□□ -0.71
RCN1-208ENST00000532474 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
RCN1-208ENST00000532474 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
RCN1-208ENST00000532474 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
RCN1-208ENST00000532474 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
RCN1-208ENST00000532474 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
RCN1-208ENST00000532474 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
RCN1-208ENST00000532474 GRIN2AQ12879 1464 aa10.6□□□□□ -0.71
RCN1-208ENST00000532474 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
RCN1-208ENST00000532474 NUP160Q12769 1436 aa10.58□□□□□ -0.72
RCN1-208ENST00000532474 PLEKHG5O94827 1062 aa10.57□□□□□ -0.72
RCN1-208ENST00000532474 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
RCN1-208ENST00000532474 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
RCN1-208ENST00000532474 KIF27Q86VH2 1401 aa10.56□□□□□ -0.72
RCN1-208ENST00000532474 PBRM1Q86U86 1689 aa10.56□□□□□ -0.72
RCN1-208ENST00000532474 IGF1RP08069 1367 aa10.52□□□□□ -0.72
RCN1-208ENST00000532474 FKBP8Q14318 412 aa10.5□□□□□ -0.73
RCN1-208ENST00000532474 MIER1Q8N108 512 aa10.5□□□□□ -0.73
RCN1-208ENST00000532474 JPH4Q96JJ6 628 aa10.5□□□□□ -0.73
RCN1-208ENST00000532474 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
RCN1-208ENST00000532474 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
RCN1-208ENST00000532474 PRG4Q92954 1404 aaPredicted RBP10.47□□□□□ -0.73
RCN1-208ENST00000532474 CARMIL1Q5VZK9 1371 aa10.46□□□□□ -0.74
RCN1-208ENST00000532474 KIAA0586Q9BVV6 1533 aa10.45□□□□□ -0.74
RCN1-208ENST00000532474 LHX8Q68G74 356 aa10.45□□□□□ -0.74
RCN1-208ENST00000532474 SHROOM2Q13796 1616 aa10.44□□□□□ -0.74
RCN1-208ENST00000532474 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
RCN1-208ENST00000532474 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
RCN1-208ENST00000532474 PHF12Q96QT6 1004 aa10.42□□□□□ -0.74
RCN1-208ENST00000532474 ERCC6L2Q5T890 1561 aa10.42□□□□□ -0.74
RCN1-208ENST00000532474 CUL7Q14999 1698 aa10.41□□□□□ -0.74
RCN1-208ENST00000532474 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
RCN1-208ENST00000532474 ZBTB47Q9UFB7 747 aaPredicted RBP10.41□□□□□ -0.74
RCN1-208ENST00000532474 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
RCN1-208ENST00000532474 TSPYL2Q9H2G4 693 aaPredicted RBP10.39□□□□□ -0.75
RCN1-208ENST00000532474 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
RCN1-208ENST00000532474 CARMIL2Q6F5E8 1435 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms