RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 WDR62O43379 1518 aa11.63□□□□□ -0.55
PACS1-211ENST00000531298 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
PACS1-211ENST00000531298 ARHGAP35Q9NRY4 1499 aa11.62□□□□□ -0.55
PACS1-211ENST00000531298 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
PACS1-211ENST00000531298 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
PACS1-211ENST00000531298 CTTNBP2Q8WZ74 1663 aa11.61□□□□□ -0.55
PACS1-211ENST00000531298 FHAD1B1AJZ9 1412 aa11.6□□□□□ -0.55
PACS1-211ENST00000531298 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■■■■■ 37.5
PACS1-211ENST00000531298 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
PACS1-211ENST00000531298 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
PACS1-211ENST00000531298 APLP2Q06481 763 aa11.58□□□□□ -0.56
PACS1-211ENST00000531298 PBRM1Q86U86 1689 aa11.53□□□□□ -0.56
PACS1-211ENST00000531298 GRIN2BQ13224 1484 aa11.52□□□□□ -0.56
PACS1-211ENST00000531298 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
PACS1-211ENST00000531298 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.57
PACS1-211ENST00000531298 SAMD9Q5K651 1589 aa11.52□□□□□ -0.57
PACS1-211ENST00000531298 THOC2Q8NI27 1593 aaKnown RBP11.51□□□□□ -0.57
PACS1-211ENST00000531298 FMN1Q68DA7 1419 aa11.51□□□□□ -0.57
PACS1-211ENST00000531298 FYCO1Q9BQS8 1478 aa11.51□□□□□ -0.57
PACS1-211ENST00000531298 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
PACS1-211ENST00000531298 RRBP1Q9P2E9 1410 aaKnown RBP11.5□□□□□ -0.57
PACS1-211ENST00000531298 TIAM1Q13009 1591 aa11.49□□□□□ -0.57
PACS1-211ENST00000531298 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
PACS1-211ENST00000531298 TDRD9Q8NDG6 1382 aaKnown RBP11.48□□□□□ -0.57
PACS1-211ENST00000531298 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
PACS1-211ENST00000531298 MAGI1Q96QZ7 1491 aaPredicted RBP11.45□□□□□ -0.58
PACS1-211ENST00000531298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
PACS1-211ENST00000531298 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
PACS1-211ENST00000531298 UGGT2Q9NYU1 1516 aa11.43□□□□□ -0.58
PACS1-211ENST00000531298 ERCC6Q03468 1493 aa11.43□□□□□ -0.58
PACS1-211ENST00000531298 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
PACS1-211ENST00000531298 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
PACS1-211ENST00000531298 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
PACS1-211ENST00000531298 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
PACS1-211ENST00000531298 KIAA0586Q9BVV6 1533 aa11.4□□□□□ -0.58
PACS1-211ENST00000531298 SNAPC4Q5SXM2 1469 aa11.4□□□□□ -0.58
PACS1-211ENST00000531298 EIF4G3O43432 1585 aaKnown RBP11.4□□□□□ -0.58
PACS1-211ENST00000531298 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
PACS1-211ENST00000531298 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
PACS1-211ENST00000531298 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
PACS1-211ENST00000531298 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
PACS1-211ENST00000531298 SYNJ2O15056 1496 aa11.37□□□□□ -0.59
PACS1-211ENST00000531298 KCNA4P22459 653 aa11.36□□□□□ -0.59
PACS1-211ENST00000531298 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
PACS1-211ENST00000531298 GRIN2AQ12879 1464 aa11.36□□□□□ -0.59
PACS1-211ENST00000531298 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
PACS1-211ENST00000531298 FHOD3Q2V2M9 1422 aa11.35□□□□□ -0.59
PACS1-211ENST00000531298 KANK4Q5T7N3 995 aaPredicted RBP11.34□□□□□ -0.59
PACS1-211ENST00000531298 HECW1Q76N89 1606 aa11.33□□□□□ -0.6
PACS1-211ENST00000531298 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
PACS1-211ENST00000531298 NPM3O75607 178 aaKnown RBP11.32□□□□□ -0.6
PACS1-211ENST00000531298 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
PACS1-211ENST00000531298 NUP160Q12769 1436 aa11.32□□□□□ -0.6
PACS1-211ENST00000531298 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
PACS1-211ENST00000531298 ARHGEF11O15085 1522 aa11.3□□□□□ -0.6
PACS1-211ENST00000531298 KIAA0556O60303 1618 aa11.29□□□□□ -0.6
PACS1-211ENST00000531298 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
PACS1-211ENST00000531298 ACIN1Q9UKV3 1341 aaKnown RBP11.29□□□□□ -0.6
PACS1-211ENST00000531298 SUPT6HQ7KZ85 1726 aaKnown RBP11.28□□□□□ -0.6
PACS1-211ENST00000531298 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
PACS1-211ENST00000531298 DISP1Q96F81 1524 aa11.26□□□□□ -0.61
PACS1-211ENST00000531298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.25□□□□□ -0.61
PACS1-211ENST00000531298 PHLDB1Q86UU1 1377 aa11.25□□□□□ -0.61
PACS1-211ENST00000531298 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
PACS1-211ENST00000531298 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
PACS1-211ENST00000531298 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
PACS1-211ENST00000531298 MIA2Q96PC5 1412 aa11.24□□□□□ -0.61
PACS1-211ENST00000531298 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
PACS1-211ENST00000531298 FGD6Q6ZV73 1430 aa11.23□□□□□ -0.61
PACS1-211ENST00000531298 TCOF1Q13428 1488 aaKnown RBP11.22□□□□□ -0.61
PACS1-211ENST00000531298 MYOM3Q5VTT5 1437 aa11.22□□□□□ -0.61
PACS1-211ENST00000531298 RAPGEF6Q8TEU7 1601 aa11.21□□□□□ -0.61
PACS1-211ENST00000531298 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
PACS1-211ENST00000531298 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
PACS1-211ENST00000531298 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
PACS1-211ENST00000531298 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
PACS1-211ENST00000531298 SETD5Q9C0A6 1442 aa11.19□□□□□ -0.62
PACS1-211ENST00000531298 DHX57Q6P158 1386 aaKnown RBP11.19□□□□□ -0.62
PACS1-211ENST00000531298 TTBK1Q5TCY1 1321 aaPredicted RBP11.19□□□□□ -0.62
PACS1-211ENST00000531298 P3H3Q8IVL6 736 aa11.18□□□□□ -0.62
PACS1-211ENST00000531298 ADCY10Q96PN6 1610 aa11.17□□□□□ -0.62
PACS1-211ENST00000531298 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
PACS1-211ENST00000531298 CDK11AQ9UQ88 783 aaPredicted RBP11.17□□□□□ -0.62
PACS1-211ENST00000531298 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
PACS1-211ENST00000531298 NUP153P49790 1475 aaKnown RBP11.16□□□□□ -0.62
PACS1-211ENST00000531298 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
PACS1-211ENST00000531298 HFM1A2PYH4 1435 aa11.15□□□□□ -0.62
PACS1-211ENST00000531298 ABCA8O94911 1581 aa11.15□□□□□ -0.62
PACS1-211ENST00000531298 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
PACS1-211ENST00000531298 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
PACS1-211ENST00000531298 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
PACS1-211ENST00000531298 RAB3GAP2Q9H2M9 1393 aa11.13□□□□□ -0.63
PACS1-211ENST00000531298 TROQ12816 1431 aaPredicted RBP11.12□□□□□ -0.63
PACS1-211ENST00000531298 ITSN2Q9NZM3 1697 aa11.12□□□□□ -0.63
PACS1-211ENST00000531298 ROCK1Q13464 1354 aa11.1□□□□□ -0.63
PACS1-211ENST00000531298 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
PACS1-211ENST00000531298 CHD1O14646 1710 aa11.09□□□□□ -0.63
PACS1-211ENST00000531298 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
PACS1-211ENST00000531298 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
PACS1-211ENST00000531298 CDK13Q14004 1512 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms